Carassius gibelio (silver crucian carp): 128024960
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Entry
128024960 CDS
T08819
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128024960
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
128024960
2.7.7.52 RNA uridylyltransferase
128024960
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
128024960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
RRM_1
PAP_assoc
TUTase
RRM_3
RL
zf-met
RRM_5
Ashwin
RRM_Nup35
DUF7066
Motif
Other DBs
NCBI-GeneID:
128024960
NCBI-ProteinID:
XP_052466822
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Position
A12:complement(5490883..5498110)
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AA seq
794 aa
AA seq
DB search
MELDKDIQTMQRGFHCSLCVVNIPNKPSLEDHVKGKKHQHLLRLRAQRKAQEENGVFVSG
FKPDTSQTDLKEYFTQFGPVSDVIMDKDKGVYAIVEFSEPQNAQAALAQLQHQLNGLKLR
VKPRERKEFKLASKGKRDSKNTQISLDKLNLEICKATSVNEQMQKVVESFELKDNEKKVR
DLLVQLLQEVFTEFFPDCQIVPFGSSVNTFGIHSCDLDLFLDLENTKVFQARAKSSEVET
GENQSEDCRSEDSILSDIDLSTASTAEVLELVAVILRKCVPGVHKVQTLSTARLPVVKFS
HRELNLHGDITINNRLAVRNTRFLQLCSGIDSRLRPLVYTIRLWAKQKQLAGNLSGPGPL
LNNYALTLLVIFYLQNRDPPVLPSVNQLKNMACEEEECIIEEWDCTFPSQPYSVPPSKNT
EDLCNLLSGFFTFYSKFDFSASVVSLRDGHVLPITDFLQIDDEAASDSKPRRSSAPKLGP
MNVLDPFELNHNVAGNLNERTQKNFKRECCEAEKYCRSLQYQRKSTKGKSWGLVRLFALP
CEAGPRSQVGTEKVMEVSIPFKAAILPEPLRAQLALAGNGFRGLWFAKVCSAVHMVFQDI
LKCSPLEETQAAAVYQNLDKTDRDENEMEVNNNRSVEDSGLQAKSETGKKRPLTVEEGPS
TSTDVQAKRQRLEADLEHPEPVHWTWTQRKCVWAGRRKVRRDLLKTGDVISKPEGGCVDI
ESRVTQSIVEKEEKLQDLLEFKVDAEVLGGDESTKVVLHFHPSQDTAGVFQDFFHFLESF
LPKMAETILGRVGS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgataaagacatccagacgatgcaaagaggatttcactgcagcctctgcgtc
gttaatattcccaacaagccaagcctggaagatcatgttaaaggaaagaaacatcagcat
ctcctgcggctcagagctcagcgcaaagctcaggaggagaacggtgtgtttgtgagtggc
tttaaaccagacacgtctcaaacggatctgaaggagtatttcacacagttcgggccggtg
tcagatgtgatcatggacaaggataagggtgtctatgctatagttgagttctccgagcca
cagaacgctcaggcagctctggcacagctacagcatcagctcaatggtctcaagctccga
gtcaagcccagagagaggaaagagttcaaactggcaagcaaggggaaacgagactccaaa
aacacccagatcagcctggacaaactcaacctggagatctgcaaggctacatctgtaaat
gagcagatgcagaaggtggtggagagtttcgagttgaaagacaatgagaagaaagtgaga
gatcttctagttcagctgctgcaggaagtcttcacagagttcttcccagattgccaaatt
gtgccttttggctcctctgtgaacacatttgggatccactcctgtgaccttgatctgttc
ctcgaccttgagaacaccaaagtatttcaagctcgtgccaagtcttctgaagtggagaca
ggcgaaaatcagtctgaggattgccgttctgaagattcgattttgtctgacattgacctg
tccactgcctctactgctgaagtcttggagctggttgcagtcattttgaggaagtgcgtt
ccaggcgtgcacaaagtccagacgctcagcactgcccgactacctgtggtcaagttcagt
catcgagagctcaacctccacggagacatcaccatcaacaacagattggcagtgagaaac
actcgatttctacagttgtgttcaggcattgactccagactgcggcccttagtctacacc
atccgattatgggccaagcagaaacaattagcggggaacctgtctggccctggaccgttg
ttgaataattacgctcttacactgctggtgatcttctaccttcagaatcgagaccctcct
gtgcttccctctgtgaaccagctcaaaaacatggcctgtgaggaagaagagtgtattatt
gaagaatgggattgtacatttcctagtcagccatatagtgtaccccccagcaaaaacact
gaagatctctgcaatttgctttctggattcttcaccttctactctaaatttgatttctct
gcatcagtggtgtctctgcgagacggccatgtgctgcctatcacagacttcctccaaatt
gatgacgaagcggcctctgattccaaaccaaggcgctcctctgcccctaaactggggcct
atgaatgtcctggatccatttgagctaaaccacaatgtggccgggaaccttaatgaacga
acgcaaaagaatttcaagagggaatgctgtgaggctgagaagtactgccgcagtttgcag
tatcagcgcaaatcaaccaagggcaaatcctggggcctcgtgcggctctttgcactgcca
tgtgaagccggaccccgttcacaggtcgggactgagaaggtaatggaggtcagcatcccc
ttcaaggccgctattctcccagaacccttgcgtgcccaactggctttggctgggaatggt
tttagaggtctttggtttgcaaaggtctgctctgctgtgcacatggtgtttcaagatatt
ttaaaatgttcacctttagaggaaactcaagctgcagctgtttatcaaaatctggacaaa
accgacagggatgaaaatgaaatggaggtgaataataaccgaagtgtcgaagattctggt
ctacaagccaaaagtgaaactggtaagaagagacctcttacagtggaggagggtccatca
acctccaccgatgtacaagctaaaagacagagactagaagctgatttggagcacccagag
ccagtccactggacttggactcaaagaaagtgtgtttgggcaggccgacggaaagtgcgg
agagatctcttgaagactggcgatgtgatttccaaacctgaaggaggctgtgttgacatc
gagagcagagtgacacagagcattgtggagaaagaggagaaactgcaagatttgttggaa
ttcaaagtggatgcagaagttctcggtggggacgaaagcaccaaagttgtcctccatttt
caccccagccaggatactgcaggcgtctttcaagacttcttccattttctggagtccttc
ctgccaaagatggcagaaacaattctagggagggttgggtcataa
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