Carassius gibelio (silver crucian carp): 128024987
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Entry
128024987 CDS
T08819
Name
(RefSeq) rho-related BTB domain-containing protein 1-like isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128024987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128024987
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cgib04031
]
128024987
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128024987
GTP-binding proteins [BR:
cgib04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
128024987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
TAF1C_beta-prop
Motif
Other DBs
NCBI-GeneID:
128024987
NCBI-ProteinID:
XP_052466871
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Position
A12:complement(6154859..6173028)
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AA seq
688 aa
AA seq
DB search
MDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQE
VLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYL
EIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLSRPIKPGDILPPESGREVAKELGIP
YYETSVFDQFGIKDIFDNAIRAALISRRHLQFWKSHLRKVQKPLLQAPFLPPKAPPPLIK
IPECPTKNRDGPRQLLESPLCVDVMFVIQEHIQLFAHRIYLSTSSSKFFDLFQMDFSDES
QCVVVTERHGRDQLMRTLSLDTDEDVTVLPNLSPCSLRASKSDGTLKMMSSSGMNWCTKL
SLASWSKAFHSIHKENVINPVTGAPALMTIVKMDHSIHHGPFSAVLRFLYTGELDEKEKD
LMKIAQIAEILEVFDLRMMVENIMNNESFMNQEITKAFHVRKANRIKECLTKNNFTDVVF
RLDDGTINAHKPLLISSCDWMAALFGGSFMESANDEVSFPNTSKVCMQAVLEYLYTNQLS
PMADLDPMELIALANRLCLPRLIALTEQYAVSELLKASKDGQDIDGEVLTYLELAQFHNA
NQLAAWCLHHICTHYNRICANYRKEIKAKSAAENQEYFEKHRWPPVWYLKEEDHYQRVKK
EREKEDVVLNKHHSRWRWCFWSTSPAVA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggactacgaaagacccaacgtagagaccatcaagtgtgttgttgttggagacaatgcg
gtggggaagactcgccttatttgtgcccgggcctgcaacactaccctgacccagtaccaa
ctgttggccacccatgtacccaccgtctgggccatcgaccagtacagagtctgtcaagag
gtcttagaacgttccagagacgttgtggatgatgtaagtgtgtccctccggctatgggac
acctttggagatcatcacaaagacagacgcttcgcctatgggaggtctgacgtcgtggtt
ctctgcttttccatcgccaatcccaactccctacaccatgttaaaaccatgtggtacctc
gagatcaagcacttctgtccacgcacacctgtcatcttggttggttgccagttggacttg
cgctacgctgatctggaagcagtcaatcgagcaaggcgaccattatcaagacccattaaa
ccaggagatattttgcctccagagagtggaagggaggtcgccaaagagcttggcatccca
tactatgagacaagcgttttcgaccagtttggcatcaaggatatctttgataatgccatc
cgagctgccctcatctccagacgtcacctacaattctggaagtcccacctgaggaaggtc
caaaagccactgctgcaggcaccatttttgccacccaaagcccctccaccacttattaag
atcccagagtgcccaaccaaaaacagggatggcccgaggcagcttcttgagagccccctg
tgcgttgatgttatgtttgtcattcaggaacacatccaattgtttgcccacaggatctac
ctgtctacctcatcctccaaattcttcgacctctttcagatggatttctccgatgagtcc
cagtgcgtggtggtaactgagcgtcacgggcgggatcaactgatgcgcacactaagcctg
gacacggatgaggacgtcaccgttctcccaaatctttcgccttgctcgctcagggcctcc
aagagtgatggaaccctcaagatgatgagttctagtggaatgaactggtgcaccaagctg
tccctggcctcttggagcaaggccttccatagcatccacaaggagaatgtgatcaacccg
gtcacaggtgcgccagctctaatgactatcgtcaagatggatcattccatccaccatgga
ccgttcagcgctgtcctacgcttcctctacactggtgagctggatgagaaggagaaggac
ctgatgaaaatcgcccagattgcagagatcctagaagtgtttgatcttaggatgatggtg
gagaacatcatgaacaatgaaagcttcatgaatcaagagatcacaaaagcattccatgtg
agaaaggccaaccgaatcaaagagtgtctcaccaagaataacttcacagatgtggtgttc
aggttggacgatggcaccattaacgcccacaaaccactgctgatctctagctgtgactgg
atggctgctttatttgggggttctttcatggagagtgcaaatgacgaggtctcattcccc
aacaccagcaaggtatgtatgcaggcagtgctggagtatctctacaccaatcagctgtcg
cccatggcagacctggacccaatggagctaatcgccctggccaacagactgtgccttcca
cggctcatcgccctgacagagcaatacgctgtgagcgagttattaaaagcatctaaagat
ggacaggatatcgatggagaggtactcacctatctagagcttgctcagttccataatgct
aatcaacttgctgcctggtgtttacaccacatctgcacccattacaacaggatatgtgcc
aattaccgcaaagagatcaaggcaaaatcagcagcagaaaaccaggaatattttgagaag
caccgctggcctccggtctggtatctgaaagaggaagatcactatcagcgggtgaagaag
gagagagagaaggaggatgtggtgttgaataaacatcactctcgatggcgctggtgtttc
tggagcacgtcccctgctgttgcttga
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