Carassius gibelio (silver crucian carp): 128025089 Help Entry 128025089         CDS       T08819                                  Name (RefSeq) collagen, type I, alpha 1b   KO K06236   collagen type I alpha Organism cgib  Carassius gibelio (silver crucian carp) Pathway cgib04510   Focal adhesion cgib04512   ECM-receptor interaction cgib04518   Integrin signaling cgib04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cgib00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128025089    04518 Integrin signaling     128025089  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     128025089   09142 Cell motility    04820 Cytoskeleton in muscle cells     128025089  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cgib00536]     128025089 Glycosaminoglycan binding proteins [BR:cgib00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128025089 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  128025089 NCBI-ProteinID:  XP_052467049 LinkDB All DBs Position A12:9053762..9076095 Genome browser AA seq 1450 aa AA seqDB search MFSFVDIRLGLLLAAAVLVVRGQGEDDISFGSCTLEGQNYNDRDVWKPEPCQICVCDSGT VMCDEVICEDITECANPEIPEGECCPICPDDVVTEAPYPPVPPVTDGPVGPVGDPGPQGP PGRDGTPGENGLPGPPGPPGTPDFGSGSFLSQMAYGSEKSSGPPVPGPPGPMGPRGPPGP AGSSGPQGFTGPPGEPGEPGSPGPMGSRGPAGPPGKNGEDGEAGKAGRPGERGPAGPQGA RGFPGTPGLPGIKGHRGFSGLDGAKGDTGPAGPKGEPGVHGESGTPGAMGARGLPGERGR PGPPGPAGARGSDGNPGAAGPPGSTGPAGPPGFPGGAGAKGETGPAGGRGSEGPQGARGE PGNPGPAGAAGPAGAPGSDGSPGGKGSPGAAGISGAPGFPGSRGPAGPAGSSGAPGPKGN NGDPGPQGPKGDAGPKGEPGPVGPQGLAGPAGEEGKRGARGEPGGAGPVGPPGGRGAPGN RGLPGADGAPGPGGAPGERGANGPMGAQGATGEAGRPGEAGLPGSKGMTGAPGSPGPDGK AGPSGAPGQDGRPGPPGAAGSRGAPGVMGFPGPKGADGEAGKAGERGVTGPPGALGAPGK DGDVGAPGAPGPAGPSGEKGEQGPAGSPGFQGLPGSQGATGEAGKPGDQGAPGEAGPHGP SGPRGDRGFPGERGGPGPAGPTGPRGAPGSAGNDGAKGEPGLAGAPGGVGPAGMQGMPGE RGAGGMPGARGDRGDAGAKGPDGAAGKDGLRGMTGPIGLAGPPGAAGEKGEAGLVGPPGL TGPRGSPGERGEVGPPGPAGFAGPPGANGQPGAKGETGAHGPKGDAGAPGAPGPVGAAGP QGPAGATGAKGARGGAGPPGATGFPGAAGRVGPPGPSGAAGPPGPAGATGKEGQRGARGE RGPAGRPGEAGAAGSPGPSGEKGSTGPDGPAGPAGLPGPPGVIGSRGIVGLPGQRGERGF GGLPGPSGEPGKQGPTGPLGERGPPGPMGPPGLGGAPGEAGREGNPGHDGAPGRDGPPGP KGDRGESGNSGPPGSPGAPGAPGPMGPSGKNGDRGEAGPAGPAGPSGPAGARGAQGPAGP RGDKGEAGEAGERGMKGHRGFTGMAGVPGPPGSPGDQGPAGPSGPAGPRGPSGSNGFPGK DGMNGIPGPIGPPGPRGRSGEMGPAGAPGLPGPPGPPGPAGIGEPFFAMPQPEKGPDPLR GGYRADDASVRDRDAEVDTTLKSLSQKIENIRSPEGTQANPARMCRDLRMCHSDWKSGFY WVDPNQGSPLDAVKVFCNMETGETCVSPSQNTIPMKNWYTSKNIREKKHVWFGESMPNGF QFQYGSEGSDPEDVNIQLTFMRLMSNEATQNITYHCKNSIAYMEEATGNLKKALLLQGSN DIEIRAEGNSRFTYRVSEDGCTSHTGTWGKTVIDYKTTKTSRLPIIDIAPMDIGAPDQEF GVEIGPVCFL NT seq 4353 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatattcggttagggctgctgctcgccgcggcggtccttgtggtg agaggacaaggagaggatgatatctcattcggtagctgtacattggaaggtcagaattac aacgacagggatgtatggaaacctgagccctgccaaatctgcgtctgcgacagcggaacg gttatgtgcgacgaggtgatctgcgaagatataacagagtgtgccaatccagagattccc gagggagaatgctgccccatctgccccgacgatgttgtgactgaagctccatatcctcct gtgcctccagttactgacggtcctgttggtccagtcggagacccaggtcctcaagggcct cccggcagagatggtactcccggagagaacggactccctggaccccctggtcctcctgga acccctgacttcggtagtggatctttcctttcccaaatggcttatggcagtgagaaatcc agcggccctcctgtccccggaccaccaggccccatgggtccccgtggcccccctggacct gcaggttcatctggccctcagggattcactggccccccgggcgagcctggtgagcctggt tctcctggtccaatgggttctcgcggtcctgccggtcctcctggaaagaatggagaggat ggtgaagctggcaaagccggtcgtcctggtgagcgcggacccgccggccctcagggtgct cgtggattcccaggaacccctggactccccggcatcaagggacacagaggtttctctggt ctggatggagctaagggagacactggacctgctgggcctaagggagagcctggtgttcat ggtgagagtggtactcctggagccatgggtgctcgtggtttgcccggtgagagaggtcgc cctggtcctcctggccctgctggtgctcgtggtagtgatggcaaccctggcgctgccgga cctcccggatccactggtcctgccggtcctcctggtttccctggtggtgctggtgctaag ggagagactggccctgctgggggccgtggttcagagggacctcagggagcccgtggtgag cctggtaaccctggacctgctggtgccgccggtcctgctggagctcctggttctgatggt tctcctggtggcaaaggatctcctggtgctgctggtatttctggtgctcctggtttccca ggttcgcgtggacctgctggacccgctggatcttctggtgctcctggccccaaaggaaac aatggtgatccaggtccccaaggccctaagggagatgctggtcctaagggagaacctggc ccagttggacctcaaggtctcgccggacctgctggtgaggaaggaaagagaggagctcgt ggtgagcccggtggtgctggacctgtcggaccccccggaggccgtggtgcccctggtaac cgtggtcttcctggtgctgatggcgctcccggacctgggggtgctcctggtgaacgcgga gctaacggaccaatgggagctcaaggagccactggagaggctggtcgcccaggagaggca ggattgcctggatctaagggtatgactggtgcccctggaagccctggacctgatggcaaa gctggaccttctggtgcacctggacaagatgggcgtcccggaccccctggagctgctgga tcccgtggtgcacctggtgtgatgggattccctggtccaaagggagctgatggtgaggct ggtaaagctggtgagaggggtgttactggacctcctggtgctttgggcgctcctggcaag gatggtgatgttggtgctcctggtgctcctggacctgctggcccatctggagagaaggga gaacagggacctgccggttctcctggattccagggtctgccaggatcacagggtgccact ggtgaggctggcaaacctggtgaccagggtgctcctggtgaagctggtcctcacggtcca tctggtccaagaggtgacagaggtttccccggtgagcgtggtggtcctggacctgctggc cctactggacctcgtggagctcctggttctgctggtaatgacggtgctaagggagagcct ggattggctggagcccctggtggtgttggtcccgcaggaatgcagggtatgcctggagag cgcggtgctggcggcatgcctggagccagaggagacagaggtgatgctggagccaagggc cctgatggagctgctggtaaggatggtctgcgtggaatgactggccctattggacttgct ggacctcctggtgctgctggtgagaagggagaggctggtcttgttggacctccaggattg actggtcctcgtggttcccctggcgagcgtggtgaggtcggtccacctggacctgctggt tttgccggacctcctggtgccaacggacaacctggtgctaaaggagagactggtgcccac ggacccaagggtgatgctggagctcctggagctcctggccccgtcggagccgctggccca cagggacctgctggtgctactggagctaagggtgctcgtggtggtgctggacctcctggt gctactggtttccctggtgctgctggtagagtcggacccccaggtccttctggtgctgct ggacccccaggccccgctggtgctactggtaaagaaggacaaagaggtgctcgtggtgag agaggacccgctggtcgccctggagaggctggtgccgccggatccccaggaccctctgga gagaagggtagcaccggtcccgacggtcctgctggtccagctggtcttccgggtcctcct ggtgtgattggatcccgtggtatcgttggtcttcccggacaaagaggagagagaggtttc ggcggtctccctggaccttctggagagccaggaaagcagggacccactgggcctttaggt gaacgtggacctcccggacccatgggaccccctggactgggtggagctcctggtgaggct ggacgtgagggtaaccctggacatgatggtgctcctggccgtgatggtccacctggacca aagggagaccgtggtgagtctggcaactctggtcctccagggtcccctggtgctcctgga gcccctggccccatgggtccttccggcaagaatggtgatcgtggagaggctggtcccgct ggtcctgctggtccttctggccctgctggtgctcgtggagcccaaggtccagccggtcct cgtggagacaagggtgaagctggtgaggctggagagagaggcatgaagggacaccgtggc ttcactggaatggctggagttcctggacctcctggatcccctggtgaccaaggacccgct ggaccatctggccctgctggacctcgtggaccttctggctccaatggctttcctggtaag gacggtatgaatggtatccctggccccattggacctcctggtccccgtggtcgctctgga gaaatgggacctgctggtgctcctggtcttcctggacctcctggtcctcctggacctgca ggcatcggtgagcccttcttcgccatgccccagcccgagaagggtccagatcctctgcgt ggaggctacagagctgatgacgctagcgttcgtgaccgtgatgctgaggtggataccacc ctgaaatctctgagccagaagattgagaacatccgtagccccgaaggaacccaggccaac cctgcccgcatgtgccgtgacctcaggatgtgccattctgactggaagagcggtttctac tgggtggatcccaaccagggctctcctctggatgccgtcaaggtcttctgcaacatggaa actggtgagacctgcgtcagcccatctcagaacaccattcccatgaagaactggtacact agcaagaacatcagagagaagaagcacgtttggttcggagagtccatgcctaatggcttc cagttccagtatggcagcgagggctctgatccagaggatgttaacatccaactgaccttc atgcgcctgatgtctaatgaggctactcagaatatcacctaccactgcaagaacagcatc gcctacatggaagaggccacaggcaacctgaagaaggctctgctcctgcagggctccaac gacattgagatcagagcggagggcaacagccgcttcacatacagagtcagcgaggatggc tgcacgtcacacactggcacatggggcaagacagtcatcgactacaagacaacaaaaaca tctcgtctgccaatcattgatatcgctcctatggacattggtgctcccgatcaggaattc ggcgtagaaatcggcccagtctgcttcttgtaa

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