KEGG   Carassius gibelio (silver crucian carp): 128025095
Entry
128025095         CDS       T08819                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    128025095
   03400 DNA repair and recombination proteins [BR:cgib03400]
    128025095
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    128025095
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     128025095
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N Adaptin_N NOL11_N PDS5
Other DBs
NCBI-GeneID: 128025095
NCBI-ProteinID: XP_052467057
LinkDB
Position
A12:complement(9183712..9202330)
AA seq 1013 aa
MADNSVLLGLVEEFVSGQVDSKVAETATGVKTGQFTILQLVEALGLSLSSSQHQTRGRGV
QLLSQVLQESYSSLSEREVEVLLAFYENRLKDHYVIIPHVLQGLKALTKCSVLPPGSAVS
ILKSIFQDIHVQSLMLAERSCVYNILISLMESKEEELKGLGADFIFGFVQSVDGERDPRN
LLLAFQVARNIIQRGYDLGKFVEELFEVMSCYFPIDFSPPPSDPRGITREELVLSLRAVL
TGTSQFAEFLLPLIIEKLDSDIQSAKVDSLQTLAACGLTYSHKELAEFLPGLWSSIRREV
SQTASERVETAGLSALSALVSCLSRSVLTSDSEDVLQVFLSLVLKDCQHHLCEPDLKLVW
PSAKLLQAAAGASYRASLIVSAAIIPSLLEQYNNRTQCAQRRTLLEVLQGFVQPTALSRP
ADGEDSVLVAFQQSLCGVVFSALTESSAGLQITGTRVLTALGQQPGLMSQPDVEKAVDHL
TRLILEEDDPKVSLAVVECSGSLAHLHPKAFISRMIPRLKEEILSGQSDAAVRQRCVTVL
ASVSSLSSVVQESAPVLLQVLASAHTGSCGFSVEEVAAVCISLQKIAAYARDSEEIGRFF
HDIIIPHLLGLCLQAALQSRDAGHSSPLTDEAVLSAVVPVMSTACAALQSESASRMAAQA
VSLFLDGDVSFLPENAFPSKIQLLQIQSPALSQLVCLLMACVCSLPCSVEIPEIDRLLLQ
LEDLSCTCPHLFSYTCAAKCFAGLLNKRPAGEALDAVLERVMKRISVELENSSSVQRTRA
LTLLLWVSKALLLRYHPLSTALTDQLFALLSDPALGSQAADGFGVLMSDSQDVLNRGCHA
DVRIMYRQRFFAENSAKLVEGFNSAEQEKKSCYLKALSHIVSNLPRQVQLTELPALLPLL
LEALACVDQAVQLSTLSCLQPVLLEPPEALRNQLEALFSRLLALTTSPAMKVRIASLQCV
HALSRLPEHMVLPFRARVLKALAVPLDDKKRLVRKEAVAARAEWFLLGSPGGR
NT seq 3042 nt   +upstreamnt  +downstreamnt
atggcggataacagtgtgctgctgggtttagtggaagaattcgtgtctggacaggttgac
agcaaggtcgcagaaaccgcaacaggtgtcaagaccggacagttcacgattcttcagctg
gttgaagctttggggttgagtttgagcagctctcagcatcagacgcgtggccgtggagtc
cagctcctgtctcaggtcctgcaggagagttacagcagtctttctgagagagaggtggag
gtcctgctagctttctatgaaaacagactgaaggatcactatgtgatcataccacatgtt
cttcaggggctcaaggctttgacgaaatgctcggttctgcctcctggttcagctgtgtcc
atcttgaaatccatcttccaggatattcatgttcagtccttgatgctggctgaacgatca
tgtgtttacaacatccttatcagtctaatggagtccaaagaggaggagctcaaaggtttg
ggtgcagacttcatatttggatttgtgcagtcagtagatggagaacgagatccacgcaac
ctgctgctggccttccaggtggccaggaacatcattcaaaggggctatgatcttgggaag
tttgtagaggaactgtttgaagtgatgtcctgttattttcctatagactttagtcctccg
cccagcgatcctcgagggatcacacgggaagagcttgttctttctcttcgggctgttctt
actgggacgtctcagtttgctgagtttctgttaccattgatcattgagaagctggactca
gatattcagagtgctaaagtggactccctgcagacactggccgcctgcggtctgacgtat
agccataaagagctggcagaattccttccgggtctttggagctcaatacggagggaggtg
tcccagacggccagtgagcgagtggagaccgctggtctgtcggctctcagtgctctggtg
tcctgtctttctcgttctgtgctcacttcagactccgaggatgtgctgcaggtgttttta
agcctcgttctcaaagactgtcagcatcatctctgtgagccagacctcaagctggtgtgg
cccagtgccaaactcctgcaggccgcggccggagcctcgtacagagccagtctgatcgtg
tccgctgccatcataccttccctcctggagcagtataataacaggacacagtgtgctcag
cggcgcaccctgctggaggttctgcagggtttcgtgcagcccaccgcactcagccggcct
gcagatggagaggacagtgtattggttgcgtttcagcagtcgttgtgtggcgtggttttc
tctgcgctgacggagtccagcgccggtctccagattacaggcacacgtgtgctcactgca
ctgggacagcagcccggtttgatgtctcagccagatgtggagaaagctgtcgatcattta
accagactcattctggaggaagacgatcctaaagtgagtttggctgtggtggagtgttca
ggatctctggctcatctgcatcccaaagcctttatttccaggatgattcctcgactgaag
gaagagatcctgtcaggtcagtctgatgcagctgtacgtcagcggtgtgtgacggtgttg
gcgtcggtgtcgtctctgtccagtgtggtgcaggaaagcgcccctgttctgctacaggtg
ctagcttcagcccacacaggtagctgtggtttctctgtggaggaagtggctgctgtatgc
atcagtttgcagaagatagcggcgtacgcgcgtgactcggaggagattggacggttcttc
catgacatcatcattccacaccttctaggactctgcttacaggcagcgctgcagagtagg
gacgctggtcacagtagtccactcacagacgaggctgttctgtctgctgtagtccctgtc
atgagcacagcatgtgctgcgctacaatcagaatcagcgtcccgcatggccgcccaggca
gtttctctcttcctggatggagacgtgtctttcctgccagagaatgccttcccttccaaa
atccagctgctccagatccagtctccagctctgtctcagctggtgtgtctgctcatggcc
tgcgtctgctctcttccatgcagcgtggagattcctgagattgacaggcttcttctgcag
ctggaggatctgagctgcacctgtcctcacctgttctcctacacctgtgcagccaagtgc
ttcgctggcttgctcaacaagaggccggcaggtgaagctctggacgcggtgctggagaga
gtgatgaagaggatcagtgttgagctggagaactcttcctctgtccagcggactcgagcg
ctcacgctgctgctctgggtgtctaaagccctgctcttacgctaccatccgctatcaaca
gccctgaccgaccagctcttcgctctgttgagtgacccggcgttaggatctcaggcggct
gatggtttcggcgtcctcatgagcgactctcaggatgtgctcaatcgcggttgtcacgct
gacgtgcgcatcatgtaccgacagcgcttcttcgctgaaaactcggccaaactagtcgaa
ggcttcaactcggcagagcaggagaagaagtcttgttatttgaaggcgctgtctcatatt
gtcagtaaccttcccagacaggtgcagctcacagagcttcctgcgctgctgccgctgctg
ttggaggctctggcgtgtgtggatcaagccgtccagctgtccactctctcctgtctgcag
ccggtgttactggagccaccagaggccctcaggaaccagctggaggcgctgttctcccgt
ctgctggccctcaccaccagccctgctatgaaagtgaggattgcgtcgctgcagtgtgtt
catgcgctctctcgcctgcctgaacatatggtcctgccgtttcgtgccagagtcctgaaa
gctctcgctgttcctctggacgacaaaaagcgtctggtgaggaaggaagccgtggcggct
cgagcagaatggtttctgttaggaagccccggtggaagatga

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