Carassius gibelio (silver crucian carp): 128025170
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Entry
128025170 CDS
T08819
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128025170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128025170
03012 Translation factors [BR:
cgib03012
]
128025170
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128025170
Translation factors [BR:
cgib03012
]
Eukaryotic type
Release factors
128025170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
128025170
NCBI-ProteinID:
XP_052467183
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Position
A12:complement(12707252..12714201)
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AA seq
564 aa
AA seq
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MDSRDTAPDSWEQEDDVEATADTELQSAFTGLNVDAAEFVPSFLSRGSPGDATSDDTDAV
ASMEISEPVAAVENGETDDSAVETWEQKGEPDEEEPGGGSPTDTGFCGDEAQDEMMEEDE
EMPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGMTGANLKESSELCPWYTGLPFIPHLDSLPIFN
RSSDGPIRLSIVDKYKDMGTVVLGKLESGSIMKAQQLIMMPNRHTVEVLSLLSDDVETDY
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGDKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacacagcccctgattcgtgggaacaggaggacgatgtcgaggccacg
gctgataccgagcttcagtccgccttcaccgggctcaacgtggacgctgcggaattcgta
ccatcctttctttcccgaggttcaccgggagacgccacgtctgatgacaccgatgcagtg
gccagcatggagatctcagaaccagtggctgcggtggagaatggagagacggatgacagt
gcagtggagacgtgggagcagaaaggagagccggatgaggaggaaccaggaggtggatcc
ccgacggacacaggattttgtggggatgaggcacaggacgaaatgatggaggaggatgag
gagatgccgactcccaagctgcctcctcctccaccggacgcccctaagaaagaacacgtg
aatgtagtgttcataggacatgtggatgcaggcaagtctacaattggtggacagattatg
tatctaactggtatggtggacaaacgaacgctggagaaatatgaacgggaggcaaaagag
aagaatagagagacctggtatctttcctgggctctagacacaaaccaagaggaaagagac
aaggggaaaacagtagaagttggaagagcttactttgaaactgagaaaaagcactttact
attcttgatgccccaggccataaaagctttgtacccaacatgattggaggggcatcccaa
gctgacttggcagtgctggtcatctctgccagaaaaggcgagtttgagaccggttttgaa
aaggggggtcagacaagggagcacgccatgctggccaaaaccgctggagtcaaacatttg
atagtcctcatcaacaaaatggacgatcccactgtgaactggagtttggatagatacgag
gaatgtaaagagaagttagtgccatttctgaagaaggtgggctttaatccgaagaaagac
attcacttcatgccctgctctggaatgactggagccaacctgaaagaatcttctgagctg
tgcccttggtacacggggttaccgttcattccacatctggacagcctgccaatcttcaac
agatctagtgatggtcccatccgattatctattgtggataaatacaaggacatgggcact
gtggtgcttggaaaactggaatctggaagtatcatgaaagcacaacagcttattatgatg
ccaaataggcacacggtggaagtgttgagccttctctcagatgatgtggaaacggattac
gccggacctggcgaaaacctgaagctccggctcaaaggcatcgaggaggaagagattctc
ccaggctttatcctatgcaatgctgagaacctctgccactcagggcgcacttttgatgcc
cagattgtcattattgaacacaaatccataatatgcccaggttacaatgcagtactacac
atccatacctgcatagaagaagtgcagataacagcgttaatctgtctggtggacaagaag
acaggagacaagagcaagactcgcccacgctttgtcaaacaagaccaagtatgcatcgcc
cgtcttagggccgcaggaactatctgcttagagacttttaaagacttccctcagatggga
cgtttcaccttaagagatgagggtaagacaatcgcaattggcaaggtgctgaagttggta
cctgagaaggactaa
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