Carassius gibelio (silver crucian carp): 128025215
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Entry
128025215 CDS
T08819
Name
(RefSeq) vacuolar-sorting protein SNF8-like
KO
K12188
ESCRT-II complex subunit VPS22
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128025215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128025215
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128025215
Membrane trafficking [BR:
cgib04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
128025215
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128025215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
MarR_2
CDK5RAP3
AbiEi_4
Sigma70_r1_1
SelB-wing_3
DUF4896
Motif
Other DBs
NCBI-GeneID:
128025215
NCBI-ProteinID:
XP_052467301
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All DBs
Position
A12:complement(13205003..13207458)
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AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIAQMSKQLETFKTHLEEFASKHKQEIRK
NSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIK
LDELHYRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIRDSLKWERERACHVLDHLLKEGLAWLDSQAVGEPQYWLPALF
SELLSRDITPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaagaggagtcggagctggagcgatcgcaaaaaagaaacttgcagaggcaaag
tataaagagagaggtactgtccttgctgaggatcagattgcgcagatgtcaaaacaactg
gagacctttaagacccatctggaagagtttgccagcaagcacaaacaagaaatccgcaag
aactctcagttcagggttcagttccaagagatgtgtgccactataggagttgatccactt
gcgtctggaaaaggattttggtctgagatgcttggtgttggagatttctactatgagctt
ggtgtacagatcattgaagtctgtttagctctaaaacacagaaatggtggtctcatcaaa
ttggatgaacttcactaccgtgtgttgaaaggaagagggaaatttgcacaagatgtgagc
caggatgacttggtgcgggccatcaagaagctcaaggctatgggaaatggcttcgggatg
attccggttggaggctcttatctagtccagtcggtcccagctgagctcaacatggatcac
actgttgtccttcagctagcagagaaaaagggctacgtgacagtgagcgagatcagagac
agcctcaagtgggagagagagcgggcctgtcatgtccttgatcacctgctgaaagaaggc
ttagcatggctggactcccaagctgttggggagccacagtattggctgcccgctctgttc
tcggagctgttatctcgagacattacgcctgaggaggccaaccaaatgacaccttga
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