Carassius gibelio (silver crucian carp): 128025289
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Entry
128025289 CDS
T08819
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128025289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
128025289
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128025289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
128025289
NCBI-ProteinID:
XP_052467460
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All DBs
Position
A12:complement(15973777..15990469)
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AA seq
292 aa
AA seq
DB search
MSNYTITLSGPAPWGFRLQGGKDFNMPLTISRITPGSKAASGNLSQGDIITAIDGVSTEG
MTHLDAQNKIKAAITKLSLTMQRSRRPAPVPTATPRMDSPMPVIPHQKVIANTAANQEYV
PSFNPIALKDSALSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQARGN
EMSGDDSTGSPLASLPIKDPLVDSASPVYQAVIKPDNKEMEMSEWARRAANLQSKSFRIL
AHITGTEYLQDPDEEALRKSREKFESEVKGPRFAKLKNWHNGLSAQILNIQG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattacacaataaccctgtctggacctgcaccttggggcttcaggctgcaggga
ggcaaagacttcaacatgcccctgaccatctcccggatcacaccaggtagcaaggcagca
agcggaaacctcagtcagggtgacataattacggcgatcgatggggtcagcactgagggc
atgacccatctggatgcccaaaacaagataaaggcagccatcaccaaactcagcctcacc
atgcagaggtcgagacgtcccgctcctgtacccacagccactccaagaatggactcaccc
atgccagttatccctcaccagaaggtcattgccaacacagctgccaaccaagagtatgtt
cccagttttaatcccatcgcactgaaggactccgctttgtccactcacaagcctattgag
gtcaagggtcctggtgggaaggctactatcatccatgcccagtacaacactcccattagt
atgtattctcaggatgccattatggatgccattgctggtcaggcccaagccagaggaaac
gagatgagcggtgatgactccactggatctcccttggcctcacttcctattaaagaccct
cttgtggacagtgcctctccagtctaccaggctgtgatcaaacctgacaataaggagatg
gagatgtcagagtgggcccgtcgtgctgccaacctgcagtccaagtccttccgcatcctg
gctcatatcacaggaacggagtatctgcaagatccagatgaggaggctcttagaaaatca
agggagaagtttgaatcagaggtaaaaggcccaagatttgccaaactgaaaaattggcac
aacggcctgtctgcacagatccttaacatccaggggtaa
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