Carassius gibelio (silver crucian carp): 128025300
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Entry
128025300 CDS
T08819
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib02010
ABC transporters
cgib04145
Phagosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128025300
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128025300
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128025300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
128025300
Enzymes [BR:
cgib01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
128025300
Transporters [BR:
cgib02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
128025300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_21
AAA_15
AAA_30
ABC_ATPase
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
128025300
NCBI-ProteinID:
XP_052467474
LinkDB
All DBs
Position
A12:complement(16227633..16232195)
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AA seq
727 aa
AA seq
DB search
MMTSEAHPIYKTVAVHFGLLCCDLAIWACVWLVLLWLDGEGSLDLWCLWALRAISCVVLY
ALSTIFADSSIQPLLKRWVALLSFLPPVFDSMQTMLQGTMRGFTPVPDPGMVILSLATST
LTYIMWEMAFPHGGSSKGARNQKIDEEAKALLMRVIRYSKPDYLHLGAAFLFLSLAALFE
TFIPYCIGKVIDILSGKYQHTNFSWAIGLLALCSLGSSLFSGLRGGMFMCSLSRLNKRIR
NMLFQNLMKQEISFFEENKTGSLTSRLVSDTDKMGRSVAMNVNVLLRSFVKTCGMLYFML
GLSWQLTLLTCIEMPLLAFIQNSYNNISQKIAKEIQDCNAETTELASSVIGSMKTVRSFK
AEHQEQQRYEQTLNRKLQVLRRKGIYSATHLLIRRFITVGLKVAMLFLGRNLISSGKLSS
GSLLAFVFYQKDMVTNMKHLVYIYGDMLNTAGSAVKVFQLLDRKTQMREAGDLAPEKVEG
RLTFEKVTFSYRSRPNEKALKSVTLELSPGKLTALVGPSGGGKTSCVCLLQRFYEPQEGE
VLLDGEPLYQYQHQYLHKKVAMVSQDPVLFSGSVRYNIEYGLKDCTLERVKEAARKANAH
NFISKLEQGYDTDVGECGDQLSAGQKQCIAIARALIRNPQILILDEATSHMDCSTQQAVQ
DVLNNVKDQTVLVIAHRLETVEKADHIIFMEGGEAVEQGTHQQLMAKGGRYYRLKEKLFN
LETQPVD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgatgacctcagaggctcaccccatctataaaaccgtggcagtgcatttcggcctgttg
tgctgtgatcttgccatctgggcttgtgtgtggttggtactgctgtggctggatggagag
ggcagtctggatctatggtgtctgtgggctctcagggccatcagctgtgttgtgctttat
gcattgagcacaatttttgctgacagcagcattcagcctctcctgaagcgctgggtagct
ctactgagcttcctaccgccagtgtttgacagtatgcagacaatgctgcaagggaccatg
agaggcttcacacctgttcctgatcctggcatggtgatcctgagcttagctacatctacc
ctcacatatattatgtgggagatggcattcccacatggtggatcatctaagggtgccaga
aaccagaagatagatgaagaggccaaagcactcctaatgagggtcattcgatactccaag
ccagattatcttcatctaggggctgcattcctcttcctcagcctggcagcattgtttgag
acattcatcccatactgcattggcaaagttattgacatattgagtggaaagtaccagcac
accaatttctcatgggctattggactcttggcactgtgctcactcggaagctccttgttc
agtggtttgcgtggcgggatgttcatgtgtagcctcagcaggctcaacaaaagaatacga
aacatgttgttccagaacctcatgaagcaggagataagcttctttgaagaaaacaaaaca
ggtagtctcacgtcacgcttggtctctgacactgataaaatgggtcgttctgtggccatg
aatgtgaatgtgttactgcggagtttcgtgaagacatgtgggatgttgtactttatgttg
ggactatcctggcagttaaccctcctcacctgcatcgaaatgccacttcttgctttcatt
cagaattcatacaacaacatctcccagaaaatagccaaagagattcaggactgtaatgca
gagactacggagttggcatcttctgtcattggatcgatgaagacagtgcgcagttttaag
gcagagcatcaggagcaacagcgatatgaacagactcttaaccgaaagctccaggttctg
aggcgtaaaggcatatacagtgccacccatctcttaatacgcaggttcattacagtaggc
ttgaaggtagcaatgctgttcctaggccgaaatctcatctcctctggaaagcttagcagc
ggcagcctgcttgcatttgtattctatcagaaggacatggtgaccaacatgaagcatctt
gtatatatctatggagacatgctgaataccgcgggatcagcagtgaaggtgttccagctg
cttgacaggaagacacagatgagagaggcaggtgatttggccccagagaaggttgaggga
agattaacctttgaaaaggtcaccttttcctaccgctcacgccctaatgaaaaagcactc
aagtctgttacattggaattgagtccagggaagctgacggcattggtaggaccctcaggt
ggtgggaagacctcttgtgtctgcttgctgcagaggttttatgagccacaggagggtgag
gtgttactggatggagaacctctgtaccaataccaacaccagtacttacataaaaaggtg
gcaatggtatcccaggatcctgtgcttttctctggctcggtgagatataatattgaatac
ggtttaaaggactgcacacttgaaagagtaaaagaagctgctcggaaagccaatgcacac
aacttcataagcaaactggaacaaggatatgacacagatgttggtgagtgtggtgaccag
ctgtctgcagggcagaagcagtgcattgccatagccagagccctgataagaaacccacag
attctcatcttggacgaggccaccagccacatggactgcagcacgcaacaagctgttcaa
gatgtgctgaataacgtaaaggatcagacagtactggtgatagctcatcgtttggagact
gtagagaaagcagaccacattatcttcatggagggaggtgaagccgtggagcagggaaca
caccagcagctcatggctaaaggcggcagatactatcggctcaaagaaaagcttttcaat
ctggagacacaaccagtggactaa
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