Carassius gibelio (silver crucian carp): 128025305
Help
Entry
128025305 CDS
T08819
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128025305
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
128025305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
zf-met
zf-C2H2_15
DUF6801
Zf-C2H2_ZNF451_C
zf-C2H2_6
Homeodomain
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
128025305
NCBI-ProteinID:
XP_052467490
LinkDB
All DBs
Position
A12:complement(16311457..16367068)
Genome browser
AA seq
1099 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNEERNSGLEQHDVSNYSHVLEGQSDSDDEDKLHIVEEEGSLL
DGADCDSVAPDEDPNGTVDPDSRWDDVKEECVSDEDERSRDALVEEMLQQGDTTVIFPEA
PEDEPRQGTPETSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSC
SLCSYTFAYRTQLDRHMTAHKAGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLR
IHSGEKPYECSNCKKRFSHSGSYSSHISSKKCIGLISVNGRPQTSPATGAAKTPQCSSPS
LPTSSPTARVQVRDKLDNSKPLQEQLPLTQIKSEPLDYEYKPVVVAPSARGINGMFQGGA
AAPLQGAVQAVVLPTVGLVSPISINLGDLQNVLKVAVDGNIIRQVLESTQAKGQQAGTGI
IGAGGVGIAQATQQVIQAISLPILDQDGTAKIYINYSLDPSQAQALLQSPKKEPLVLNTE
ACKAQKLPEDLTVKTNRDKTTITVDKKNILHNDTTLKHCGKDGHRVNGKNLDGKIDLEEG
LCPGQPTLKNLLSLLKAYNEPTKEELAKISESVSLPAEVVKKWFEKMQLGEISLDPSSPL
AEDEQTTPGDLDGTRGESPRPELDKQINSEEQGERECCSPAEGLAARENGIESVPTSPSP
LNLSADGPVPARTLEEGEGPLDLSLPKSAATAAVASGHVNTVYSAQEEPLNLTCTKELLS
NASTNAAIYASQPSANPINIVTTQLPTLLAITDQGQAQCLRALTTTKQTILIPQLTYSYT
TTSSSPAGNDTPQKNVIHVNGIKEEKQEMGSEVTSTLEEQTDSDSGPTRKKMKRTESGLY
ACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDK
CGKRFSHSGSYSQHMNHRYSYCKKEAKGQGLGQGVEEEDNTGEGQPQTGSTATSPPSHLD
SDERGSSTREDESEEDDDIGSGSLVDEDEIQVVKIGEEGDEDDQGADEDQEGERMEGAEQ
EDGNEEGESEENDGQTLKVVVMQDECEDENGEEEQSAQEAMDTGTLEHTKDTTERENPED
DERRIENEENTATMNGDVK
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacaaacgaa
gaaagaaattcaggtttggaacaacatgatgtgagtaactacagtcatgtgctggagggc
cagtcagactcagatgatgaagataagcttcacatcgtggaggaggaagggagtctcttg
gacggggctgactgtgacagtgtggcccctgatgaggaccctaatgggaccgtcgaccct
gacagtagatgggatgatgtgaaagaggagtgtgtgtcagatgaggatgagaggagcaga
gatgctttggttgaggagatgctccagcaaggagacacgaccgtcatcttcccggaggct
ccagaagacgaaccgcgacagggcacgccagaaaccagcggacatgatgaaaatggcacg
ccagactcattttctcagcttcttacatgtccctattgctctcgtggctacaagcgttac
acctcactgaaggagcacattaaatacagacacgagaagagcgaggacaacttcagctgc
tctctctgcagctacacatttgcctatcgaacacagcttgacagacacatgactgcacac
aaagctggccgagaacagcggcatgttactcagtcaggtggaggagggaatcgaaagttt
aaatgcactgaatgtggcaaagccttcaagtacaaacaccacctgaaagaacacctgcgc
atccacagtggagaaaagccttatgagtgctccaactgcaagaagcgtttctctcattcc
gggtcctacagttcccacatcagcagtaagaagtgcattggcctcatctcagtaaacggg
cggccgcaaacttctcccgccaccggggctgctaagacccctcagtgctcttccccatcc
ctgccaacctcttcccccacggcccgtgtccaagtcagagacaaactggacaatagcaaa
ccccttcaggaacagcttcccttgacacagatcaagtctgagccactggactatgagtac
aagcctgtggtggtggccccatctgctagaggcataaatggcatgttccagggaggggcg
gcagcccctcttcagggtgctgtacaggctgttgtgctcccaacagtgggtctagtatcc
ccaatcagcatcaacctgggggacttacagaacgtgctgaaggtggcagtggatgggaac
atcatcaggcaagtgctggaaagcacgcaagctaaggggcagcaagcagggacaggaatc
attggagcaggaggggtgggaattgcccaagcaacccagcaagtcatacaggccattagt
cttcccatcttagatcaggatggcactgcgaagatctacatcaactacagtcttgaccct
tcacaggcccaagcacttcttcaaagtccaaagaaggaacctttggtgttgaacactgaa
gcctgcaaggcacagaagctgccagaggacctgacggtcaagactaatagggacaaaacc
accatcactgtggacaagaaaaacattttacacaatgacacaacacttaagcactgtggt
aaagatggacacagggtaaatgggaaaaaccttgatgggaagatagacttagaggaagga
ctgtgtcctggccagcctaccctgaagaaccttctctccttgctcaaggcttacaacgag
cccaccaaggaggagctggcaaagatatccgagtctgtcagtcttccagcagaggtggtg
aagaagtggtttgagaagatgcagttgggagagatatctctagatccctcctccccccta
gctgaggatgagcagaccactcctggggatttggatgggactagaggtgaatcacccaga
ccagagctggataagcaaattaactcagaggagcaaggagagagggaatgctgtagccca
gctgagggcctagcagctagggagaatgggatcgagagtgtccctacatccccatcacca
ttaaacctatcggccgatggtcctgtcccagccaggactcttgaggaaggcgagggacct
ctcgatttgtcgctaccaaaatctgctgctacagctgctgtggctagcggtcacgtaaac
actgtttactcggctcaagaggagccactgaatttaacttgcacaaaggaactgctcagc
aatgcaagcaccaatgctgccatatatgccagccaaccaagtgccaatcccattaacatc
gtgaccactcaactgcccaccctattggctatcactgaccagggacaagcgcaatgtctc
cgtgcacttaccaccactaaacagaccatcctgattccgcagctgacttacagttacacc
actacatcctccagcccagcagggaacgacacaccacagaagaatgttatacacgtcaat
ggcatcaaggaagagaaacaggaaatgggttcagaggtcacctcaacattggaagaacaa
acagactcagactcagggccgacgaggaagaagatgaaaaggacggagagtggcctgtac
gcctgtgacctgtgtgacaaaatcttccagaagagcagttcactgctccgccataaatat
gaacacacaggaaagaggcctcatgaatgtgggatctgcagcaaggccttcaaacacaag
caccacctaatagaacacctgcgcctgcactccggagaaaagccgtaccaatgcgacaag
tgtggaaaacgcttctcccactctggctcctactcacaacacatgaaccaccgatactcc
tactgtaagaaagaggctaaaggtcaaggtctaggccagggagtcgaggaagaggacaat
actggagaggggcagcctcagacgggcagcacagcgacctcgcccccttcccacctggat
tcggatgagcgggggagtagtaccagagaggatgagagcgaggaggatgatgatataggc
tcggggagcttagtggacgaggatgagattcaggtggtcaagattggagaggagggagat
gaagacgaccagggagcagatgaagaccaggaaggagagaggatggaaggggcggaacaa
gaagatggtaacgaggaaggcgagagtgaggaaaatgacggacagacgctgaaagtcgta
gtaatgcaggacgaatgtgaagacgaaaacggagaggaggagcaatcggcgcaggaggcc
atggacacaggaactcttgaacacacgaaggacacaacagaaagagagaacccagaggat
gatgagagaaggattgaaaatgaagaaaacacagccactatgaatggagacgtgaagtga
DBGET
integrated database retrieval system
