Carassius gibelio (silver crucian carp): 128025376
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Entry
128025376 CDS
T08819
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00061
Fatty acid biosynthesis
cgib00071
Fatty acid degradation
cgib01100
Metabolic pathways
cgib01212
Fatty acid metabolism
cgib03320
PPAR signaling pathway
cgib04146
Peroxisome
cgib04216
Ferroptosis
cgib04920
Adipocytokine signaling pathway
Module
cgib_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
128025376
00071 Fatty acid degradation
128025376
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128025376
09143 Cell growth and death
04216 Ferroptosis
128025376
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128025376
03320 PPAR signaling pathway
128025376
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgib01004
]
128025376
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128025376
Enzymes [BR:
cgib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128025376
Lipid biosynthesis proteins [BR:
cgib01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128025376
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of breast milk
128025376
Exosomal proteins of breast cancer cells
128025376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
128025376
NCBI-ProteinID:
XP_052467651
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All DBs
Position
A12:complement(18583467..18593369)
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AA seq
681 aa
AA seq
DB search
MEFLFEFLFTPLSTSGLVFLFSLAAVALVHLNTRPKPLHPPTDLNQQTVGVAGGARKTTL
LKDDNLISYLYEDAQTLYDVFQRGLRVSGNGPCLGYRKKRQPYQWLKYKQVSDRAEFLGS
GLIHRGQKPSQESFIGIFAQNRPEWIIAELACYTYSMVAVPLYDTLGPEALVFIINRAKI
STVICDKQDKAETLLDNCEKNLTPVLKTIILMDPYDSALIDRGSKSGVEVLPLKDVEALG
KSNHQKPAPPKPEDLSIVCFTSGTTGDPKGAMLTHENVVADAAGVVKTFESVFVPVPSDV
SISFLPLAHMFERVVQTVLYSVGGRVGFFQGDIRLLPDDMKALQPTVFPVVPRLLNRVYD
KVHSGAHSPFKKWLLNFAIAQKCAEVKQGIIRNDSIWDKLIFHKVQESLGGRVRVMVTGA
APISPTVLTFLRASLGCQIFEAYGQTECTAACSFTIPGDWHTGHVGVPVSCNIVKLVDVE
EMNYFASNGEGEVCVKGKNVFRGYLNDPEKTAEALDKDGWLHTGDIGKWLPSGVLKIIDR
KKNIFKLAQGEYIAPEKIENVYIRSAPVAQVFVHGDSLQSSLVAIVVPDLEVLPSLAEKL
GVKGSLEELCKNQEIKKAIISDLNKLGREAGLKSFEQVKDLYLHPDMFTIENGLLTPTLK
AKRADLTKFFKIQIESLYANM
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaatttttgttcgagttcctgtttaccccgctttccacttcgggactggtgtttctg
tttagtctcgccgctgtagctctggtccatctcaacaccaggcctaaaccactgcatcca
cccacagacctcaaccaacagactgtgggcgtagcaggtggcgctagaaaaacaacactc
ctgaaagatgacaacttgatctcgtacttatatgaggatgcccaaactctatatgacgtt
tttcaaagagggctacgcgtctcaggaaatggaccgtgcttgggatacagaaagaagcgg
caaccttatcaatggcttaaatacaaacaggtttcagacagagctgaattcttggggtcc
ggacttatccatcgcggccagaagccatcgcaagaatcatttattggcatcttcgcccag
aaccggccagagtggattatcgctgaactggcctgctatacctattccatggtggcagtg
cctctttacgacaccttgggacctgaggctcttgtgttcatcattaatagagcaaagata
tctacggtgatatgcgataagcaggacaaggcagaaacgctgctggataactgtgagaaa
aacctcacacctgttttgaaaaccatcattctcatggacccctatgattctgcattgatt
gatagaggctctaagagcggtgtggaagtcctgcccctgaaagatgtagaggccttggga
aagagcaaccatcagaagcctgctccaccaaaaccagaagacctaagtattgtttgtttt
accagtgggaccacaggggatccaaagggagccatgctgacccatgaaaatgtggttgca
gatgcagccggcgtggttaagacgtttgagagcgtctttgtgcccgttccatccgacgtg
tccatctcgtttttgcctctggcgcacatgtttgaaagagttgtacagacagtgctgtac
agtgtcgggggaagagtcgggtttttccaaggtgatatcagacttctaccagacgacatg
aaagccttgcagcctactgtattcccagtggttcctcgtcttctgaatcgtgtttacgac
aaggttcatagcggtgcccattctccatttaagaaatggcttctgaactttgccattgcg
cagaaatgtgcagaggtcaagcagggcattatcaggaatgacagcatatgggacaaactt
atctttcacaaagtgcaggaatctctggggggccgagtaagggtgatggtgacgggggct
gctcccatttctccaactgtgctcacttttctccgggcaagtcttgggtgccagatattc
gaggcatatggccagacagagtgcactgcggcttgttctttcaccataccgggagactgg
catactggccatgttggagttcctgtttcatgtaatattgtcaaacttgttgatgtggag
gaaatgaattactttgcatccaacggtgaaggagaggtttgtgtcaaagggaagaatgtg
tttcgtgggtatctcaatgacccagaaaagacagcagaggctttggacaaagatggatgg
ctgcacactggagatatcggcaaatggctgcctagtggagtgctgaagatcatcgacagg
aagaaaaacatcttcaaactggctcaaggtgaatacattgcaccagaaaagatcgaaaac
gtttacattcggagcgctccagtcgcccaagtgtttgtgcatggtgacagtttacagtcc
tctttagtggccatagtggtgccagaccttgaagtattgccaagtttggcagaaaaactg
ggagtgaaaggttcactagaggagctttgtaaaaaccaggaaatcaagaaagcaatcatc
tctgaccttaacaagctggggcgtgaagcagggctgaagtcattcgaacaagtaaaagac
ctgtacctccatccggacatgttcactatagaaaacggtctcctcactccaaccctgaaa
gccaaacgggcagatctcacaaaattctttaaaattcagattgagagtctttatgctaac
atgtag
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