Carassius gibelio (silver crucian carp): 128025389
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Entry
128025389 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128025389
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128025389
04082 Neuroactive ligand signaling
128025389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128025389
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
128025389
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
128025389
NCBI-ProteinID:
XP_052467678
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All DBs
Position
A12:complement(18793061..18834150)
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AA seq
1325 aa
AA seq
DB search
MATPRGFCGPSLQPILFFHLLLNVVPPCQGRPFFGPPSVNVAVVFSGLAHHSEIKGRLSP
ENFLDMPLEVNPITVLVNDTNPRALLTRLCQTMAAENLHGVVFEDDVDSEAVAQILDFIS
SQTSIPIIGISGGSAVVITHKAEGSTFLQMGASIEQQINAMFKVMEEYNWGSFVVITSLY
PGYENFVDYIRSFTDTSYFLWELQDVLSFEMSVGANDIRTRRLLQQVNSQVYLVYSSHEE
AQYLFRMASDVGLLGPGYIWIIPSLAVGNPEVSPPDSFPVGVISIITDRWRKTLRQRVRE
GVSVIVKGVHSFHKYRGFIPEGHSDCNSPVKSYTNNSLFRHMLNVSWEHKDLSFNADGYL
TKPSMVIIALDRERHWDKVGNFEGGILQMRYPVWPRYGSFLEPVSDNRHLTVATLEERPF
VIVESVDPATGTCVRNTVPCRRQSNRTESVTGHTEPYTKLCCKGFCIDILKKLSRTIKFS
YDLYLVTNGKHGKMVRGVWNGMIGEVFYKRADMAIGSLTINEERSEIVDFSVPFVETGIS
VMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNRSLVSAKAP
GGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMI
QEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMIKYNQKGVE
EALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRP
IDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLV
FAWEHLLYWKLRHSVHKSDHLDFLLAISRGVYSCFNGVEDIGRSTSIQNPDITANYAQAN
MLKMLQTAKDIVSSAKVENSLDNATKTIENWRRHSGSLPARIPLVTTTEKVPGHFSYITN
LTENHIPHMQRSITPPFTQHIKTTSPPPMVNHRVLTRPTPLRYTLPPRTRGLYDGMLPVS
SLSTPHLAMHEPPSDLASSFVPYRDFYSEHHKPCHSDFSDAIKRKKRPQNLMVESMDLRG
LHDYKDQSTCHNDANSFAENHISSSYSENPFVVADTACNPCFKTYFDSAFDDIPLIGKRK
LHRRPSFLKATWGPDRVRLPGDGPTATASPQVTIPDLFPCVDVHGRVRNTLCYSQPMDHN
YLHAVRRNSRKSPKFRHSQSTRLPSYKEAIFHNMAAVRRASTLVHRPYSYPELPVYQSPL
SYGPAELCNIFPCMGHPSDSVYGGYRAPTHLHDDHLVPVPGSRLVHSSPVVPMTWGRISS
LESEV
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggccactcctcgagggttttgtggtccctctcttcagcccatactcttctttcatcta
ttactcaatgtagtgcctccctgccagggacgtccattcttcggccctccttcagtcaac
gtggctgtggttttcagtggtttggcccaccacagtgagatcaagggccgtctgagtcca
gaaaacttcctagacatgcccctggaagtgaaccccatcacggtgctggtgaatgacact
aaccccagggctttactcacacgtctctgtcagactatggcagcagagaacctccacgga
gtggtgttcgaagatgatgtggactcagaagctgtggcacaaatcctagactttatctct
tctcagacgtccatccccatcataggcatcagtggaggttctgcagtagtcatcacacat
aaagctgaaggctctacctttctccagatgggagcttctatagagcagcagataaatgca
atgttcaaagtgatggaggagtacaactggggtagttttgtagtgatcaccagcttgtat
cctggctacgagaactttgtggactacatccgctccttcacggacaccagttacttcctg
tgggagcttcaggacgtgctgagcttcgagatgtccgtgggggccaatgacatccgcaca
cgtagactactacagcaggtgaactcgcaagtgtatctagtgtactcttcccatgaggag
gcacagtacttgttcagaatggcctctgatgtagggcttctaggccccggatacatctgg
atcatccccagcctggctgtggggaaccctgaagtgtcccctcctgacagtttcccagtg
ggcgtcattagtattatcacagaccgctggaggaaaacactacgccagagggttcgagaa
ggagtctcagtcatagtaaaaggggtgcacagtttccacaagtacagaggattcattccc
gagggtcacagtgactgcaatagtccggtcaaatcatacaccaacaattctctcttcaga
catatgctaaatgtgtcatgggagcataaggacctctccttcaatgctgatggctatctc
actaaaccttccatggtgatcattgctttggatcgagagagacattgggacaaggtagga
aattttgagggagggattctgcagatgcgataccctgtatggccccgttatggaagcttc
ctggagcccgtgtctgacaaccgccacctgactgtagccacgttggaggagaggcctttt
gtcatcgtggagagtgttgatcctgccacgggcacttgtgtgcgcaataccgtgccgtgt
cgtcggcagtccaacaggactgaaagtgtaacgggacacactgagccttacaccaaactc
tgctgcaaaggtttctgcatagacatcctaaagaagctctcacgcacaatcaagttttca
tacgacctttatctggtcaccaatgggaaacatggcaagatggtccgtggcgtctggaat
gggatgattggagaggtcttctacaagcgtgcagatatggcaattggctctcttaccatc
aatgaggagcgatcggagattgttgacttttcagtgccgttcgtggagactgggattagt
gttatggtggccagaagcaatggaacagtctcaccctctgccttcctggagccttacagt
ccagccgtgtgggttatgatgtttgtaatgtgcctgactgttgtggcaatcaccgtgttc
gtgtttgagtacttcagccctgttgggtacaaccggagccttgtcagtgccaaagccccg
gggggtccaaccttcaccattgggaagtctgtctggctcctgtggggaatcgtcttcaat
aactctgttcctattgaaaaccccaaaggcacgaccagcaaaattatggtccttgtctgg
gctttttttgctgtcatcttcctcgccagctacacagccaatttagctgccttcatgatc
caagagcagtacattgacactgtgtctggacttagtgacaaaaagtttcaaaaaccccag
gaacattatcctccttttcgcttcgggacggtcccaaatggcagcacagagagaaatatt
cggagcaattaccctgacatgcacacccacatgataaaatacaaccaaaagggagtagag
gaagctctcaacagccttaagacagggaagttggacgccttcatatatgatgcagcagtt
cttaattatatggctggcaaggacgagggctgcaagctggtcaccattggtagtgggaag
gtgtttgctaccacaggctacggcattgctctgcagaaggactcccgctggaagcgcccc
atagacctagccctcctccagttcctgggagatggggacacacagagactggagacagta
tggctgtctggaatatgccagaatgagaaaaatgaggtcatgagctccaaactagacata
gacaacatggcaggtgttttctacatgttgctcgtggctatgggtctcagtctgctggtc
ttcgcttgggaacatttactttactggaaactgaggcactctgtccacaagtctgatcat
ttagacttccttctggccattagcaggggcgtatacagctgctttaatggtgttgaagat
attggcagatctaccagcatacaaaatccagatatcacggccaattacgcccaggccaac
atgctgaaaatgctgcagacagctaaggacattgtctcctcagccaaagtggaaaactca
ttggataatgctaccaagaccattgagaactggagaagacacagcggcagcctgccagca
cgtatcccactggtgaccacaactgaaaaagttcctggtcacttctcttatatcactaac
ctcacagagaaccacatacctcacatgcagcgttccataactccacctttcacgcaacac
atcaaaaccactagcccaccaccaatggtaaaccacagagtcttaacacggcccactcct
cttcgctacacccttccccccaggactaggggtctctatgacggtatgcttccagtatcc
agtctgagcacacctcatctagccatgcatgaacctccatccgaccttgcatcttccttt
gttccatatagggacttctactctgaacaccataagccttgtcacagcgatttttcagat
gccatcaagcgaaaaaagagaccccagaatctcatggtggagtccatggatctgagaggg
cttcacgattataaagaccaatcaacgtgtcataacgatgcaaacagttttgctgaaaac
cacatatcctcatcctacagcgaaaatcctttcgtagtagcagacacagcttgtaatccc
tgtttcaaaacgtactttgactccgcattcgatgatatacctttgatagggaaaaggaag
cttcatcgcagaccttcattcctgaaagccacttggggccccgacagagtccggttacca
ggtgacggacccaccgcgacagcttccccacaagtaactatacctgacctgttcccttgt
gtggatgtacatggacgggtgaggaacaccctgtgttacagccaaccgatggatcacaac
taccttcatgctgtccggcgaaactccaggaaaagtccgaagttcagacacagtcagtcc
acaaggcttccctcctacaaggaggcaattttccacaacatggcagctgtcagaagggca
tccactttggtacacagaccctactcctacccagagctgccagtctaccagagcccactg
tcatatggacctgccgaattatgcaacatctttccctgcatgggacatcccagtgacagt
gtatatggagggtatagggcgcccacacacctacacgatgaccatctagtgcctgttcca
ggcagcaggttggttcatagcagtcctgttgtgcccatgacatggggcagaatttccagt
ttggaatcagaggtgtga
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