Carassius gibelio (silver crucian carp): 128025915
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Entry
128025915 CDS
T08819
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128025915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128025915
Spliceosome [BR:
cgib03041
]
Complex B
Other components
Prp19-related factors
128025915
Complex C
128025915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
128025915
NCBI-ProteinID:
XP_052468483
LinkDB
All DBs
Position
A13:complement(4109490..4114930)
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AA seq
235 aa
AA seq
DB search
MASSAEVVNEEETTESPAALKREERLRKFRELHFKRNEARKLNHQEVVEEDKRLKLPSNW
EAKKARLEYELIVDQKKKECAERGEDYNRVKLLEISAEDAERWERKKKKKNPDPGFSGYA
EAQLRQYQRLTKQIKPDMDNYEKQREECGEDFHPTSNSLIHGTHVPSKESVDRMVDDVEK
QIEKRSKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctagcgcagaggttgtgaatgaagaggaaaccacggagagtccagcagctttg
aagagagaagagagactcaggaagttcagagaacttcacttcaagaggaatgaagcccgg
aagctgaatcatcaggaggtggtggaggaggacaagagactgaagctgccgtcaaactgg
gaggccaagaaagcccgactggagtacgaactcatcgtggaccagaagaagaaggaatgt
gcagagcgtggcgaagactacaaccgcgtgaagctcctggagatcagcgctgaagatgca
gagagatgggagaggaagaaaaagaagaaaaacccagatcctggattctccggctacgct
gaggcccagctgagacagtaccagagactgacgaagcagatcaagccggatatggacaat
tatgagaaacagagagaggagtgtggagaagatttccaccccacctccaacagtctgatt
cacggcactcacgtcccgtctaaagagagcgttgaccgcatggtggacgacgtggagaaa
cagattgaaaagcgctccaaatacagtcgccgcagggcctacaacgacgatgctgacatc
gattatatcaacgagagaaatgctaaattcaacaagaaggctgagcgtttctacggcaaa
tacaccgcggagatcaaacagaacctggagagaggaacagccgtgtaa
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