Carassius gibelio (silver crucian carp): 128026054
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Entry
128026054 CDS
T08819
Name
(RefSeq) protein jagged-1b-like
KO
K06052
jagged-1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04330
Notch signaling pathway
cgib04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128026054
04371 Apelin signaling pathway
128026054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgib04090
]
128026054
CD molecules [BR:
cgib04090
]
Proteins
128026054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_DL_JAG
EGF_2
DSL
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_3
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128026054
NCBI-ProteinID:
XP_052468736
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All DBs
Position
A13:complement(8447073..8475665)
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AA seq
1213 aa
AA seq
DB search
MSVRRSSVFSAFYLHAFLLCLPTKVSEASGHFELEIVSMQNANGELQNGSCCDGERNPAD
RKCTRDECDTYFKICLKEYQSRVSAAGACSFGTGSTAVLGGNTFSAKGTRSERSRIVLPF
SFAWPRSYTLIVEALDFNNETASESGKLIEKASHSGMINPNRQWQRLTHNGHIAQFDYQI
RVTCDEHYYGFGCNKFCRPRDEFFGHYTCDQNGNKTCLEGWTGPDCNTAICRQGCSTEHG
SCNQPGDCKCLYGWQGLYCDKCIPHPGCVHGTCVEPWQCLCDTNWGGQLCDKDLNYCGTH
QPCLNGGTCSNTGPDKYHCSCEDGYSGVNCERAEHACLSNPCANGGTCKETSQGYECQCA
VGWSGQSCEINVDDCKPNPCKHGGTCQDLVNGFKCTCPPHWTGKMCLIDANECEDKPCVN
AKSCHNLIGGYFCECLAGWTGQNCDININDCQGQCLNGGTCKDLVNGYRCLCPPGYSGEH
CEKDVDECASSPCLNGGQCQDEVNGFQCLCPAGFSGQLCQLDIDYCQPNPCQNGAQCFNL
ASDYFCKCPDDYEGKNCSHLKDHCRTTSCQVIDSCTVAVVSNSTPEGVRYISSNVCGPHG
RCRSQAGGQFTCECQEGFRGTYCHENINDCESNPCRNGGTCIDKVNVYQCICADGWEGVH
CEININDCSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDSQCDEATCNNGGTCHDE
GDIFKCRCSPGWEGATCNIAKNSSCLPNPCENGGTCVVNGDSFTCVCKEGWEGSTCTENT
NDCNPHPCYNSGTCVDGENWYRCECAPGFAGPDCRININECQSSPCTTGSTCVDEINGYR
CLCPPGRTGLECQEVIGRPCIANGQVAADGAKWEKDCNVCQCQNGKIHCTMKKWCGPKPC
QAGKARNECPVGQSCIPIKEEHCFVKPCPSLGECWPPAPSSPSKCHASFSYQDDSCANIT
FTFNKENMPQGLSVEHVCNELRHCYLLKNLTAEYAVSITCELSSSASNEIHVSISTEEPR
SDRSPIKDIKVQIFDLVNKHNGNCTIIKAIKGVRVLQTNHKTDYLVPLLSSIFIVLWILA
LVSAFLWCIHRRRKQNTHSNATTSATEDNTTNNVREQLNQIKNPIEKHASHGVAIKDYEG
KNSIIAKIRTHNSEVEEEEMDKHLQKARFTKQPAYTLVEQEERAPSKNPNWTNKQDNRDL
ETAQSLNRMEYIV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcgacggagctcagtattttctgctttttaccttcatgcctttttgttatgc
ttgccgacgaaggtgtctgaggcatcggggcacttcgagctggaaatcgtatcgatgcag
aatgcgaacggcgagctgcagaacggctcgtgctgcgacggcgagaggaacccggcggat
cgcaaatgcacgcgggacgaatgtgatacatattttaaaatttgtcttaaggaatatcaa
tcgcgagtttccgcggctggggcttgcagtttcggaactggatctacggccgttctcggt
gggaatacattttcggctaagggaacgcggagtgaaaggtcaaggattgttttacccttc
agttttgcgtggccgaggtcctacacgttgatagtggaggccttggacttcaataatgag
accgccagtgaaagtggaaagctcattgagaaagcgtcccactctggcatgatcaacccg
aatcgacagtggcagagactgacccacaacggccatatcgcccagtttgattaccagatc
cgggtcacttgtgatgaacactactacggctttggctgcaacaagttctgccggccacgt
gacgagttctttggacattacacctgcgaccagaatggcaacaagacctgtctggaagga
tggacgggtcctgactgcaatacggcgatctgcagacaaggttgcagcaccgaacatgga
tcttgtaatcaaccaggtgactgcaagtgtctgtatggctggcagggtctgtactgtgat
aagtgcatccctcacccgggctgtgtacacggaacctgcgttgaaccctggcagtgcctc
tgtgacactaactggggtggacaactctgtgacaaagatttaaactactgtggaactcac
cagccatgtctgaatggaggaacgtgcagcaatacagggcctgacaaataccattgctct
tgtgaagacggctactccggggtcaactgcgaacgagctgaacacgcttgtctatccaac
ccgtgtgcgaatggagggacgtgcaaggagaccagtcagggttacgagtgtcagtgtgca
gtcggctggagcggccaatcgtgtgaaatcaatgtggacgattgtaaacccaacccatgc
aaacacggaggtacctgtcaggatttagttaatggcttcaaatgtacctgccctcctcac
tggaccggcaaaatgtgtctgattgatgccaatgaatgcgaggacaagccatgtgtgaat
gccaagtcatgccacaatctgattggtggatatttctgcgagtgtctcgctggctggacg
ggtcagaattgtgatataaacataaatgactgccagggtcaatgtctgaatggaggaact
tgcaaggatctggtgaatggctaccgctgtctttgccctcctggctattcgggtgaacac
tgtgagaaggacgtggacgagtgtgctagcagtccgtgcctaaacggtggtcagtgtcag
gatgaagtcaatggatttcagtgtctgtgtcctgccggcttctcaggtcagctgtgtcag
ctggatatcgattactgccagcccaacccatgtcagaacggtgcgcagtgtttcaacctg
gcctcggactatttctgcaaatgtcccgatgactacgagggtaaaaactgctctcacctg
aaggaccattgtcgaaccacgtcatgccaagtgattgacagctgcactgttgctgtggtg
tccaacagtacaccggaaggggtgcgatatatatcctcaaacgtctgtggtcctcacgga
cgctgcaggagtcaggccggaggccagtttacatgcgagtgtcaggaaggattcagaggc
acctactgccatgagaatataaacgactgtgagagtaacccatgtcgcaatggcggtact
tgcatcgataaggtgaacgtttatcagtgcatttgtgctgacggctgggaaggagttcac
tgcgaaatcaacataaatgactgcagcttgaacccctgcctgaacaagggagcatgtcaa
gacctggtgaacgatttctactgcgaatgcagaaacggctggaagggaaaaacatgccac
tcccgtgatagccaatgtgacgaagctacatgcaacaatggaggtacatgccatgatgaa
ggggacatcttcaaatgcaggtgctcacccggctgggaaggagccacgtgtaacatagcc
aagaacagcagctgtctgcccaacccatgtgagaatggtggcacctgtgtggtcaatggc
gactcgttcacctgtgtctgcaaggaaggctgggaaggatccacctgcaccgagaatacc
aacgactgcaacccacacccatgttacaacagcgggacgtgtgtggatggtgaaaactgg
taccgttgtgagtgcgctccgggtttcgcagggccagactgtcgcataaatattaatgag
tgccagtcttctccctgcacaactggctctacctgcgtagatgaaatcaatggttatcgc
tgcctatgtccacctggaagaacaggactagagtgtcaagaagtcattgggagaccctgt
attgctaacggacaagtagctgctgatggtgccaaatgggagaaagactgcaacgtttgc
cagtgtcaaaatggaaagattcattgcaccatgaaaaagtggtgtggaccaaaaccatgt
caggcaggaaaggccagaaatgagtgtcctgttggccaatcctgtattcccatcaaggaa
gagcactgctttgtcaaaccctgtcctagtcttggagaatgttggcccccagcgccctct
tcaccctccaaatgccacgccagcttctcttaccaggacgacagctgtgccaacatcacg
ttcaccttcaacaaggagaacatgcctcaaggcttgagtgtggaacatgtttgtaatgaa
ctgaggcactgttacctgctgaagaacctcacggcagagtatgctgtgtccatcacctgt
gagctatcttcatcagccagcaacgagattcatgtcagcatttccacagaagagcccagg
tcggacaggagtcctattaaagacattaaggttcaaatatttgacttggtaaacaagcac
aatggtaactgcaccatcatcaaagccatcaaaggcgtacgagtcctccagaccaaccac
aaaactgactacttggttcccctgctcagctccatcttcattgtgctctggatccttgcc
ctggtctcggccttcctgtggtgtattcaccgccggcggaagcagaacacccacagcaac
gcaactacctcagctacagaggacaataccaccaataacgtgcgtgagcagctcaatcaa
atcaaaaaccccattgagaaacatgcgtctcatggcgtggccataaaagactacgagggg
aagaactccatcattgctaaaattaggacacataactctgaggtggaggaagaggagatg
gacaaacacctgcagaaagcgcgcttcaccaaacagccggcctacacgctggtggagcag
gaggagcgtgcgcccagcaaaaacccaaactggactaacaaacaggacaacagagacttg
gagacggcacagagcttaaataggatggagtatatcgtatag
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