Carassius gibelio (silver crucian carp): 128026117
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Entry
128026117 CDS
T08819
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
128026117
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
90S particles
Other 90S particles
128026117
Pre-60S particles
Other pre-60S particles
128026117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
DUF6031
LMWPc
Motif
Other DBs
NCBI-GeneID:
128026117
NCBI-ProteinID:
XP_052468820
LinkDB
All DBs
Position
A13:10516304..10526749
Genome browser
AA seq
1274 aa
AA seq
DB search
MVKSGKLRSGTAQKIKRWKKGHSSDSNPETSRYRKAARSRNFSRPSEKRDLTVDALKLHN
ELQAGSLQKSSDAMEDQALTEKTSGTCLSGLSDCSNLTFRKVKRYWESNSASHKEICAVL
AAVTEVIRSQGGKETETEYFAALMATLEAVDSSESLAAVAYLLNLVMKRVPAAVLKKKFS
DTAKAFMDVMTNQAYSDSLSCLRLIISCLATLLRKQDLSVWSYPSTLQMYHGLLSFTVHS
KPKVRKAAQQGVCSVLGYSDFVLSDNAPVHHPAAAATAKFCCKELEQSGGSKEDTTTLHV
LGLLKDVLSAFPPSSVKSCCETLLRVMTLSHVLVTANAMQAFHKLFSSKPSPASMSAELN
AQIITALYDYVPSESDLQPLLAWLAVMEKAHVHLSSLQSSLSIGHLPRLFSVTMSCLLSP
HTQVVSAATQTLKTLLNECVAPHIAEIGPVLPGTSAGNGACILKMFRVVEEGLSYRFHSS
WPFVLQILGCFYRAAGRQAHPIMIKSLQSLGDLRATPRFPFSGELDLAVGSAVEGMGPEV
VLKAVPLLITGTDDDLEFPRSWLIPVIRDHVKNAQLAYFTSYFVPLANRLKQTGDELEQS
GQKLMAKVYQTLQMQIWTMLPGFCTKPTDLLASFKGIARSLGMALNDRPDLRLCICQALR
TLINKSCETEEAKAELKRFSKNFLPILFNVYSEQPDPGEMVSARMAVLDTIRVYLSITEQ
EMVCTFLQKASKRLNSADNSEFTRLAVIDLIVAMAPFVDEASMTQTFSLIKPFVESKDAS
IQKKAYRVLEEICGGESASCKAFVLQNLEQLKAMLMDSLTTAASSSKRPRLKCLIHIVKQ
LNEEHRGFITALLPEVILCTKEMSIGARKNAYSLLVEIGNAFVRFCGNTKDAINEYLGHV
YIGLTGSVTMVICTVLALTRLVFHYKDTIDVSSLELLLQNVCLLLSSRTRDVLKASLGFL
KVLLFCLDVKVLASHITVIMKGISNMNDMRRHFRGKLKSIYTKLIKKFGLELVKSMLPAD
QHKVIVNIRKTEARNKRRKLVSKTEEDGSDTEDETPKVKGESIEDILAETDSDSDEDEKP
KKGQKKPVRKSQAWLKEGISDEPLNFLDSKAAQRVLATNPNLKKARKAEHGFKVKSDGRL
IIKDDQKDKTKDAEMDDVLEEAGVKTKKNPKRKMRDELYDDMDVEPTMKYKAGGIGIHRP
LDRRPKFGTEDKSKKGKGDVKKTGKCDPYAYIPLKKAQLNHRKKAKLQGQFKGMVRGAKK
GALSGSKILKKRKA
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtccggaaaacttcgatccggaacagcgcagaaaatcaagcgatggaagaaa
ggtcacagtagcgacagcaatccggagacaagtcgctatcgaaaggcagcgagaagccga
aatttcagccgtccctcggaaaaaagagatctgacagtagatgctttgaaactccacaat
gagcttcaggcaggatctctgcagaaaagcagtgatgccatggaggatcaagccctgaca
gagaaaacctcagggacttgtctaagtggactgtcggactgctccaacctcacttttaga
aaagtaaagcgctactgggagtcgaactccgcgtcacataaagagatctgtgctgtattg
gcagctgtaactgaagtcattcgctctcagggaggaaaagagacagagacagagtacttt
gcagccttgatggcaacacttgaagctgtagatagcagcgaatctctggcagctgttgcc
tacctcctaaacctggtcatgaaaagggtgcctgctgcagtgcttaagaaaaagttctca
gacacggccaaggccttcatggatgtcatgacaaaccaagcctattctgactctttgtcc
tgcctgcgattgatcatatcgtgtctagcgactttgctgcgtaaacaggatctgtcagtc
tggagttacccttcaactctgcagatgtaccatggccttttgagctttacagtgcactcc
aaaccaaaggtgcggaaagcagcacagcagggtgtttgctcggtccttggctacagtgac
tttgtgttgtccgataatgccccggtccatcacccagcagcagccgccacagccaaattc
tgctgcaaagaattggagcagtcaggaggcagcaaagaagacactaccactctccacgtg
cttggtcttctaaaagacgtgctgtctgcttttcctccgagttctgtcaaatcttgctgt
gagacccttcttcgtgtgatgaccctgagccatgtgctggtgacggcaaatgcaatgcag
gctttccacaagctcttcagtagcaagccaagtcctgccagtatgtctgcagaactgaat
gctcagatcatcactgctttatatgactatgttccaagtgagagcgatctgcagccttta
cttgcatggcttgctgtaatggaaaaagcccatgttcatctttccagtttacagagctct
ctgagtatcggtcatcttcctcgcctcttctctgtcaccatgtcatgtcttctgtcccca
cacacacaagtagtttctgctgcgactcagactctgaagactttgttaaatgagtgtgtg
gctccgcatatagctgagatcggtcctgttttaccaggcacatcagctggaaatggggct
tgcatcctaaagatgtttcgtgtcgtggaggaagggttgtcctatcgttttcattcctct
tggccgtttgtgctgcagatcctaggctgtttctacagagctgcaggaagacaggctcat
cctattatgataaagagtctgcagtctctcggtgacctgcgggccacccctcggttcccc
ttctcaggggagctggatctggctgtgggcagtgcggtggagggcatgggtccagaggtg
gtcctgaaagctgtgcccctcctcatcactggaacagacgatgacctggagtttccacgt
agctggctgatcccggtcataagagatcatgtgaaaaatgctcagctggcttacttcacc
tcatactttgtccctttggcaaacagacttaaacagacaggtgatgaactggagcagtca
ggacagaaactgatggcaaaagtctaccagactctacagatgcagatttggaccatgcta
cctggattctgtactaaacccactgacctgttggcctcgtttaagggcattgctcggtct
ctgggtatggccctgaatgatcggcctgacctccgtctgtgcatctgccaggctttacgg
actcttatcaacaagagctgtgaaacagaggaggcaaaggccgaattaaaacgattttcc
aagaacttccttcccatcctgtttaatgtctacagtgagcagccagatcctggagagatg
gtgtctgctagaatggctgtcctagacacaatcagagtctacctgagcattacagaacag
gagatggtgtgcacgtttctgcagaaagcatcaaagagactcaacagtgcagacaactct
gagttcacacggcttgcagttatcgacttgattgttgcaatggctccgtttgtagatgaa
gcatcaatgacccagacattcagtttgattaaaccttttgttgagagcaaggatgctagc
atccagaagaaagcttaccgtgtgcttgaggaaatttgtggaggagagagtgcgtcttgt
aaggcttttgttctgcagaaccttgagcagctgaaagcaatgttaatggacagcctgaca
acagctgcctcctcttccaaacggcctagactcaagtgtctaattcacatagtgaagcag
ctgaatgaagaacaccgtggttttatcacagctctgcttcctgaggtcattctttgcact
aaggaaatgtctattggtgcccgcaaaaatgcctactctcttctagttgagatcggaaat
gcatttgtaaggttttgtgggaacacaaaagatgccataaatgagtatttaggccatgtg
tacattggactaactggctctgtaacgatggtcatctgtacagttcttgctttaacaaga
ctagtgttccattacaaagataccatagacgtgtcatcactggagctgctgctgcaaaat
gtgtgtcttctgctttcgagcaggacacgagacgtcctcaaagcctctctgggattccta
aaagtcttgctcttttgtcttgatgtcaaggttttagccagccatattactgttattatg
aagggcatcagcaatatgaatgatatgcgaagacattttagagggaaacttaagagcatt
tacaccaagctgattaagaaatttgggttggagctggtcaaaagcatgttgccggctgat
caacacaaggtcatagtgaacatccgtaaaacagaggccagaaataagagacgcaaactc
gtgagcaagacagaagaggatggctcagacactgaggatgagacccctaaagtgaaagga
gagagtattgaggacattctggccgagacagactctgactccgatgaagatgagaagcct
aaaaagggtcagaagaagccagtgagaaagagccaggcctggttaaaggaaggcatatct
gatgaaccactcaacttccttgattcaaaagcagcgcagagagttttggccaccaaccct
aatctaaagaaggccaggaaagcagagcatggattcaaggtgaaatccgatggaagactg
atcatcaaagacgatcagaaggataaaacaaaagatgctgaaatggatgatgtacttgaa
gaggctggagtcaaaactaagaagaatccaaagaggaaaatgcgtgacgaactatatgac
gatatggatgtggagcctacgatgaaatataaagctggtgggattggaatccataggcct
ctggatagaagaccgaagtttgggaccgaggataaatctaagaaaggaaaaggtgatgtt
aagaagacaggcaagtgtgacccgtatgcttatataccactgaagaaggcccagctcaac
cacaggaaaaaggccaaactgcaaggccagttcaagggcatggttagaggggccaagaaa
ggagcactttctggatcaaaaatactgaagaagaggaaagcctaa
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