Carassius gibelio (silver crucian carp): 128026126
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Entry
128026126 CDS
T08819
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
128026126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
128026126
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128026126
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128026126
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
128026126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
Motif
Other DBs
NCBI-GeneID:
128026126
NCBI-ProteinID:
XP_052468836
LinkDB
All DBs
Position
A13:complement(10724587..10741586)
Genome browser
AA seq
1397 aa
AA seq
DB search
MPVEGNKDQALAPLSSPVSALTPGVQEDNGLSIPRSSKEEPAATCPENVGSQNPRKSQAL
LQINRQEIQSVDRNSQAAELLGLGVDVYDQDVLEQGVLQQVDRAIQEANQAAAKAEAEKE
YESVLDDVRSCTTALKHINKILEQLAPHAASSKDISRKIESVKRQKENKEKQLKKIRAKQ
KRLQAVLDGEDVQKLEAELLIEDDEEPGPSTLGSMLMPAQESEWEELIRTGHMTPFGSRI
PQKQEKKEPRKVMLSENSGFDKYLDDQAMLADSRKRPILKKKITKKNSGQTMDGKEKKNK
SLSSKDKKLQKRMRKLQRTALKAHPKARAKVEKEPLRARRRKGDGEQTSDSEGSEYIPSD
ELMDPEEPERDDDDFWVDEDEEYQLKPYKKKNQAKTRKPKKEDESDEYIPSSSDDEDSQK
GKKVQKCKDDGDIECYRQRIRKWKRRRLCEKEAKREAGEDESEESDVEFDEGFKMPGFLW
KKLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKLKTRGSNYRYA
GLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTCKKEKLIPEIVASHGILITS
YSYIRIMQDYIQKYDWHYVILDEGHKIRNPNAGVTTSCKQFRTPHRFILSGSPMQNNLKE
LWSLFDFVFPGKLGTLPIFMEQFSVPITMGGYSNASPVQVQTAYKCACVLRDTINPYLLR
RMKADVKANLSLPDKSEQVLFCRLTEDQRQVYQNFLDSKEVYQILNGDKQVFSGLIALRK
ICNHPDLFTGGPRLLRGIPDDQLTEEEHFGYWKRSGKLIVVESLLLLWFKQGHRVLLFTQ
SRQMLEILEVFVRENGFSYLKMDGTTNIASRQPMITQFNQNKDIFVFLLTTRVGGLGVNL
TGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLT
NRVLKDPKQRRFFKSNDIYELFTLSSPDGSQGTETSAIFAGTGSDVQVPKRHKTSRPSQG
TSRPSSSSTFCVDDQDNTSLSGNRNATSVNGLSNNNAFGSQNNSLEPHSTADRLTNSTSK
DHSSANSPQKHREKKKHCETPEKDTISSDRHQRKHKKRRHSEDAKFEGSRIPHLVKKRRY
KKEENEEEEERKNEKKSDDYVLAKLFKKSGIHSVMKHDTIMEASNPDYVLVEAEANRVAK
DALRALKISRQNCRLSFSRGPTTATPPSVKRRFGHKKNSLLSQSSGTMATAAEKCKDADI
IKKSVVKKPENAAHFSGEGAQEESGSLSSSSLLARMRARNHLKQPQRLEEEEEGERESAA
VHATPTEHDELLVDLRNFVAFQAQVDGQASTKEILEYFTPRLTSTQTPVFRELLRNICEF
HRLPGQEGMWKLKADYR
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaggtaacaaggaccaggccctggctcctttgtccagccccgtcagtgcc
cttactcctggagtccaagaagacaatggcctttccatcccaagaagcagtaaggaagag
ccagcagcaacatgtcccgaaaatgttggttcacagaatcctagaaaatcacaggccctg
ctccagatcaaccgtcaggagatccagtcagtggaccgcaactctcaggctgctgagctg
ctgggattgggagtggatgtgtacgaccaggatgttctcgagcaaggtgtgttgcagcag
gtggacagggccattcaggaggccaaccaggctgcggctaaagcggaggctgagaaagaa
tatgagtccgtactggatgacgtcaggtcatgtacaacggctttgaaacacatcaacaaa
attttagagcagttagcccctcatgctgcatctagcaaggacatcagtcggaaaattgag
tctgtcaaacgacaaaaagagaacaaggagaagcagttaaaaaagatcagagccaagcag
aagagattgcaggctgttcttgacggagaggatgtccagaagctcgaggcagaattattg
attgaggatgacgaagaaccaggcccatccaccttgggcagcatgcttatgccagcccag
gagtctgaatgggaagagctcatccgcacaggtcacatgacccccttcggttcacggatc
cctcagaagcaagagaagaaagagcctcgaaaggttatgctcagtgagaactccggattt
gacaagtatcttgatgaccaagccatgttagcggatagtaggaagagacccatcttaaag
aaaaagatcactaagaaaaactcaggacagaccatggatggcaaagagaaaaagaacaaa
tccctctccagcaaagataagaagctccaaaagcgaatgcgtaagctccagaggactgct
ctgaaggctcaccccaaagccagggccaaggtggagaaggagccactccgagccaggagg
aggaaaggtgatggagagcagacgtccgacagcgagggttcagagtacatcccgagtgat
gagctgatggatcctgaggaaccagagagagatgatgatgatttctgggtggatgaagat
gaagaataccaacttaaaccatacaagaagaagaaccaagccaaaaccaggaagcccaag
aaggaggatgagagcgatgagtacattcctagcagctcagatgacgaagactcacagaaa
ggcaaaaaagtccaaaaatgtaaagacgatggagatattgagtgttacaggcaaaggatt
aggaagtggaaaaggcgcagactttgtgaaaaagaagcgaagagagaagcaggagaggat
gagtccgaggagagcgacgtggagtttgatgaaggatttaaaatgcctggtttcctctgg
aagaaactctttaagtatcagcagacaggtgtcaggtggatgtgggaactgcactgccag
caagcaggaggtattctgggagacgagatgggcctgggtaagaccatccagataattgcc
ttcctggcaggcctgagctacagcaagctaaaaacacgcggctccaattacaggtatgct
ggattggggcccacggtcattgtgtgtccggctacagtcatgcatcagtgggtgaaggag
ttccacacttggtggcctccgttccgtgttgctgtcctccatgacacgggctccttcacc
tgcaaaaaggagaagctcatcccagaaatagttgcgagccacggcatcctcatcacttcc
tactcatacatccgtatcatgcaagattacatccagaagtacgactggcattacgtcatc
ctggatgagggccacaaaattaggaaccccaacgctggggttacgacgtcatgcaaacag
ttccggacaccccaccgttttattctctctggctcacccatgcagaacaacctcaaagag
ctgtggtcgctttttgactttgtgtttccagggaagctggggactctgcccatcttcatg
gagcagttctctgtgcccattaccatgggaggatactctaatgcgtctccagtgcaggtc
cagacagcctataaatgtgcttgtgttcttcgtgacacgattaacccttacctgctgaga
agaatgaaggctgatgtgaaagcaaatctctctttacctgacaaaagtgaacaggtcctg
ttctgcagattaacagaagatcagcgtcaggtttaccaaaattttctggactccaaggag
gtttatcagattctgaatggagacaagcaggttttctcaggcctcatagctctgaggaag
atctgcaaccacccggatctgttcacaggcgggccacggttgctccgaggcatccctgat
gatcagctgactgaggaggagcacttcggttactggaaacgctctgggaagttgattgtg
gtggagtcactgctgctcctgtggttcaaacagggacaccgagttttgcttttcacccaa
tccaggcagatgctggagatcttggaggtgttcgtgagggagaatggcttctcgtatctc
aaaatggacggcactactaacattgcatccagacagccaatgatcactcaattcaaccag
aacaaagacatcttcgtcttccttctgacaacaagagttggaggtttgggagtcaatttg
actggagccaatagggttgtaatctacgacccagactggaacccaagcacggacactcag
gctcgtgagcgtgcctggaggattgggcagaagcagcaggtgacggtttacaggctgctg
acagctggaacaattgaggagaagatttaccacagacaaatcttcaaacagtttctcacc
aaccgagtgctaaaagatcctaagcagagacggtttttcaagtctaatgacatttatgaa
ctcttcacgctgagcagtcctgatggctcccagggaacagaaaccagtgcaatatttgca
ggcacagggtcagatgtgcaggttccaaaaagacacaagacctcccgtccatctcagggg
acctcgagaccatcctcttcatctacattttgtgttgacgaccaagataacacatctctg
tcaggaaatagaaacgctacctcagtcaatggtctctcaaacaacaatgcttttgggtcg
cagaacaatagccttgaacctcattccactgctgatcgtttgacaaacagcactagtaaa
gatcattcttctgcaaacagccctcaaaagcacagagagaagaaaaagcactgtgaaacg
ccagaaaaggacacgatatcctcagacagacaccagcgcaagcataaaaagcgcaggcac
tctgaagacgcgaagtttgagggcagtcgcattccgcacctggtgaagaaacggaggtac
aagaaagaggaaaatgaggaggaggaagagagaaaaaatgagaaaaagagtgacgattat
gttctagccaaactctttaaaaaatcagggatccacagcgtcatgaagcacgacaccatc
atggaggcatcgaacccggactatgtgcttgtggaagctgaagccaatagggttgcgaag
gatgcgcttagagcgctgaagatctccagacaaaactgcaggctttctttctcaagaggg
ccaacaacagcaaccccaccttcagtcaagagaaggtttgggcataagaaaaactctctt
ctgtctcagtcgtctgggacaatggcaacagcagcagagaaatgcaaggatgcagatatt
ataaagaagtcggttgtaaagaaaccagaaaatgctgctcacttcagcggtgaaggagcg
caggaggagtctggttctctctcctcatcttctcttctcgctagaatgagggccaggaat
catctcaaacaaccccagagactagaggaagaggaagagggagagagagagtctgctgcc
gtgcatgctacccctacagaacacgatgagcttctggttgacctgaggaactttgtggcc
ttccaagctcaggtggatggccaggcgagcaccaaggagatcctggagtacttcaccccg
agactcacttccacacaaacaccagtgttcagagaactgctgaggaatatttgtgagttc
cacagacttcctggtcaggaagggatgtggaagcttaaagctgactacaggtag
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