Carassius gibelio (silver crucian carp): 128026191
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Entry
128026191 CDS
T08819
Name
(RefSeq) poly(A) polymerase gamma-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128026191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128026191
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
128026191
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
128026191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DUF4269
Motif
Other DBs
NCBI-GeneID:
128026191
NCBI-ProteinID:
XP_052468975
LinkDB
All DBs
Position
A13:13182697..13193576
Genome browser
AA seq
747 aa
AA seq
DB search
MKEMSTTGNSTLGGQQPRKHYGITSAISLAFPREIDHIYTQKLTEAMKPFGVFEGEDELN
HRLAVLGKLNSFVKEWIAEISDSKNLPLSSVTNVGGKIFTFGSYRLGVHTKGADIDALCV
APRHIERTDFFSSFFEKLKRHDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIP
DNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSN
MLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRSIMSEEFKNGLTVTDEILQGKADWS
KLFEPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQ
SFPGSKENHNENEFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKD
GMTIEATHVKKKQLHHYLPPELVQRKKKSLGEINRSSNGGGSKRCSLDGSQLDSSRDTDI
GTPFSSPTPVSKQCQPVSTPEDSSITPPKHPVLVFIDSPTASEVSPPKPEQGMSIPVIGS
KPITTPVAKPPAPPAGNTIPTVVGRSVIPRITSSCPSPTELPNSVNGAPKRPHSPSLEDP
PKRHKDTEVFSDDSAFKEPYPPNSNGSDCEERPAVEDLSATKPMPIPTIDASRSQRLPSK
ELPDASSPIPTSNIRVIKNSIRLTLNR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagatgtcaacgactggtaacagtacgcttggcgggcagcagcctcggaaacat
tatggcatcacatctgcaatcagcctggcctttcccagagagatagaccatatctacact
cagaagcttactgaggctatgaaaccatttggagtatttgagggtgaagatgaactcaat
cacaggcttgcagttcttgggaagctgaattcatttgtgaaggagtggattgcagaaatc
agtgattcaaagaatcttccactgtcatcagtaacaaatgttggtggcaaaatctttact
tttgggtcatataggttgggagtgcacacaaaaggtgctgatatagatgctttgtgtgtt
gccccacgtcacattgaaagaactgactttttttcatccttctttgaaaaactaaaacgg
catgatgagattaaggatctacgtgctgtggaggatgcatttgtaccagtcatcaagttc
aagtttgatggaattgagatcgatttgctgtttgccaggctcgctctacagtcaattcct
gataacctggacctgaggggagactctctcctcagaaacttggacatcagatgtattcgc
agtctaaatggttgccgtgttacagatgagatcctatatttggtgcctaataaagagaac
ttcagattaacattgagagcaattaaattgtgggccaaacgccgtggaatctattccaac
atgctaggctttcttggtggagtttcctgggcaatgctcgtggccagaacttgtcagctc
tatccaaatgctgttgccgccacacttgtgcacaagttctttctggtcttctctaaatgg
gaatggccaaaccctgtgcttttaaaacaacctgaagacagcaatttgaatctgccagtc
tgggatccacgggtgaatccatcagacaggtatcatctgatgccaattatcactcctgca
tatccacaacagaactctacctacaacgtgtccacttccacacgcagcatcatgagtgaa
gagttcaagaatggtctcactgttacagatgaaattcttcagggtaaagccgattggtcc
aagttgtttgaacctcccaactttttccagaagtacaagcattacattgtcctcactgct
agtgcatccactgaggaaaaccacctagagtggattggactggttgaatcaaagataaga
gtgttggttggaaatttggagcgcaatgagtacatcacccttgcccatgtcaacccacag
tcttttcctgggtcaaaagagaatcacaatgagaatgaatttgtgtccatgtggttcatt
ggaatcagcttcaaaaaactggacaattcagactgtgtgaatattgacttgacctacgac
atccagtccttcacagatactgtttacaggcaggcaagcaatatcaatatgctaaaggat
ggcatgactattgaggccacacatgtgaagaagaaacagttgcatcattacctgcctcct
gaacttgtgcagaggaagaaaaagagtttgggagaaataaaccggagctcaaatggtggt
gggtcaaagcgctgctctctagatggcagtcagcttgacagctccagggacacagatatc
ggcaccccattcagctctcctacaccagtcagcaaacaatgccagccagtctccacacct
gaagacagtagtatcaccccacccaagcatccagtccttgttttcatagacagcccaaca
gcatcagaagtttctcctccaaaaccagaacagggaatgtccattccagtcatcggatcc
aagcccatcaccactccagttgccaagcccccagcacctcccgctggcaacaccattcct
acagtggttggccgtagtgtgataccacgtattacctcttcctgccctagccccactgaa
ctgcccaacagtgtgaatggagcaccaaagagacctcactctccatctctggaggatcca
cctaagaggcacaaagatacagaggtgttttctgatgactctgcatttaaagagccgtac
cctcctaatagtaatggctcggactgtgaagagaggccagcagtggaagatctttcagca
accaaacctatgccgataccaaccattgatgcatcgagatcacagagactacccagtaaa
gagcttcctgatgcatcttccccaattcccacaagtaacatccgtgtgattaaaaattca
atcaggctcacccttaaccgataa
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