Carassius gibelio (silver crucian carp): 128026267
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Entry
128026267 CDS
T08819
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128026267
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
128026267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
128026267
NCBI-ProteinID:
XP_052469126
LinkDB
All DBs
Position
A13:complement(15039551..15074276)
Genome browser
AA seq
1927 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLA
VLDPTMSPQRRLELAAQLKLWHLKVIEIVKRGQHRKSLDKLFQGFKPAVECCYFNWEVAY
PLPGITYCGADKKNASFCWVRMVQQQRGNKAGTSGEPGEGARGGTSEGTSSEQKPRCNSH
LPQQEVAVRPKETIVSKRKGVPVVNSGGVLVCLGGRVSLSLQEGGKGMYKASSSSQSAGS
KAKLTQSNKGSCGSSSGVSGKHPNAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASNT
FDFLPPPPEMLPSPSPLLREPLKYSGNASKERAYETKRVLPSAADAHACSIAIPVVVAME
KKVEAEADLDENGGDEDPLDDTRHSAALGKAQQGRREGDGSGASGASVPQAVEAGAGADA
VCEDDYQAYYLSAASEEGADRGVADSNHEEEPDIFAGIKPLEQEGRMEILFACAEALYAH
GYSNDACRLAVDLARDLLANPPDLKVEQPQTKGKKSKVSTIKQTQVATNTLSKVAFLLTV
LSERLELHNLAFNTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIPLGLVEMTSIR
DRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEELGFE
AAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQT
HKPQTLSSFYSSKPATSSQKSPSKHAAHGASGATGGVSKHTPAATTSSVQGVTGGGAAGQ
QGGLVGSGVQSAATGEGIADNRDQEGAQSTSCEQQSEAAPFKPEGTVPSRLALGGRGAYG
TRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPFRGGWTAASWGRGQDSDSISS
SSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPESHAPHVPNQPSEAAAHFYFELAK
TVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSS
HVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELALSCL
PHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQ
TVGGGSGSQREGSGRCRANGGAGRTPPEGSCGILDNTGALDPSGVSTVTTTVTAAAVVPV
ISVGSTIYQSHALPGSAMGHAQGLHPYTTIQTHLPTVCTPQYLGHPLQHIPRPAVFPVSG
AAYPQVYDSRKAYQSGFKSICLSSQGMHPAFIGAQYPFSVATGPHPPMAATAVTFPGVPM
PSMTQIAVHPYHTAEAALSTTVAAGVHSASTIQAIQGASHPGLSSQPASLVSAPFPVEDE
QHSQPISQQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARL
GVNHVYQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQ
YIHHRLIHLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISL
EMATFSP
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgctgagtgggaagacggagagaggttctcctttgaagattcagac
cgttttgaggaggactccctgtgctcattcatatcagaggcagaaagcctctgccagaac
tggagaggatggaggaaacagtcagctggcccaaattcacccactgtgaagattaaagat
ggacaagtcatccctctggtggagctgtcggccaaacaggtggcgttccatattccattt
gaggtggtggaaaaggtctatcctcccgttcctgagcagctgcaattgcggattgcctac
tggagcttcccagagaacgaggaggacatcagattatactcctgtctggccaacggcagc
cctgatgagttccagcgtggcgaacagctctatagagtgagggctgtgaaagaccctcta
cagataggtttccacctcagtgccacagtagtgtcgccccaggccggccaatcaaaagga
gcctacaatgtagctgtaatgtttgaccgctgccgcatcacttcctgcagctgcacctgt
ggagcaggagccaaatggtgtgcccacgttgtggccctctgcctcttcagaattcacaat
gcttctgcagtgtgtcttcgagcacctgtgtcagagtccctgtccagattacagcgggat
caactccagaagtttgcacaatacctcatcagtgaactcccacagcagatcttgccgaca
gctcagcgtcttttggatgagcttctgtcctcccagtctaccgctattaacacagtgtgt
ggagccccagaccctactgctggcccttcagcctctgaccagagcacctggtatctagat
gagtccaccctcagtgacaacataaagaagaccttgcacaagttctgtggcccatcacct
gttgtgtttagtgatgtgaactccatgtacctgtcatccactgagcctccggcagctgcc
gaatgggcttgtttgctgaggcccctgcgaggcagagagccagagggcatctggaacctt
ctgtccatcgtcagagagatgtttaagaggagagacagcaatgctgcgcctctgttagaa
atcctcaccgaacagtgtctcacctatgaacagatcattggctggtggtatagtgtgagg
acatcggcctctcacagcagtgctagcgggcacacaggtcgcagtaatggccagaccgag
gttgcagcacatgcgtgtgccagcatgtgtgatgaaatggttgttttatggagactggcg
gtgctcgaccctaccatgagtccccagaggcgtttggagcttgctgcccagctaaagcta
tggcacctgaaggtaatagagattgtgaaacgggggcaacaccgcaagtctctcgacaaa
ctcttccagggcttcaaaccagctgtagagtgctgctacttcaactgggaagtggcctac
cctttacctggcatcacctattgtggcgcggataagaaaaatgcctcattttgttgggtc
aggatggtgcagcagcagcggggcaataaagctggcaccagtggggaaccaggagaaggt
gctcgcggtggaacgtcagaaggtacttcttctgaacaaaagccacggtgcaactctcat
cttccccagcaggaggtggctgtccgccctaaggagaccattgtgagcaagaggaaagga
gtgccagttgtgaatagtggaggcgtgctggtttgtctgggtggaagggtctctctctct
cttcaggagggaggtaaaggcatgtataaagccagtagctcctctcaatcagctggtagc
aaggccaagcttacacaaagcaacaagggctcatgtggaagttcgagtggtgtcagcggg
aagcaccccaatgctaaacggcgaactagcagtgaggacagctctctggagcctgacatg
gctgagctgagtctggatgatggttccagtctggcgcttggagcggaggcctcgaacacc
tttgatttcctgccgcctccaccagagatgttgccgtcacccagtcctcttctccgagag
ccactcaaatacagtggtaacgcttcaaaagagcgtgcatacgagaccaaacgtgtgctg
ccctctgctgctgatgcccatgcctgctccattgcaattccagtagtggtagctatggag
aaaaaggtggaagcagaggcagatctggatgagaacggaggagatgaggaccccttagat
gatactcggcactctgcagcgctcggcaaggctcagcagggtcgcagagagggagatgga
agcggggcttcaggggcctcagtgcctcaggcagttgaggcaggagcaggagcagatgct
gtgtgtgaagatgactatcaagcgtattacctcagtgccgcatcagaagagggagcagat
agaggggttgcagacagcaaccatgaagaagagccagatatctttgctgggattaaacct
ctggagcaagagggcaggatggagatactttttgcctgtgcggaggctctctatgctcat
ggctatagtaatgacgcgtgcagactggctgttgatcttgctcgagatctgctggctaac
cctcctgacctgaaggtggagcagccacagacaaagggtaaaaagagtaaggtgtcgacc
attaaacagacacaggtggccaccaacaccctgtctaaagtagccttccttctgactgtg
ttgagtgagaggcttgagctccataacctggcattcaacactggcatgttctccctggag
ctgcagagaccgccggcttctactaaagctctggaggtcaagctggcatatcaggagtct
gaggtggtggctctgctgaagaagattcctctgggtcttgtagaaatgacttctataagg
gacagagcagagcagctccgtgatggaaacttctgcgactatcgtccggttctgcccctc
atgctggcaagcttcatatttgacgtactctgcacccctgtggtctctcccacggggtct
cgacctcctagcaggaaccgtaacaatgaaatgcctggtgatgaggagctggggtttgag
gcagctgtagcagctcttggtatgaagacaacggtcagtgaggcagagcatcctctgctg
tgtgaagggacacggagagagaaaggagacctggctctagcactaatgatcacctataaa
gatgaccaaagcaagcttaaaaagattcttgacaagctcctggatcgtgagagccagacc
cataagcctcagactctgagctccttttactctagcaaaccagccacgagcagccagaag
agcccatccaaacatgccgctcatggtgccagcggagccacgggaggggtgtcaaagcac
acgcctgctgcaacaacatcatctgtgcagggcgtgactggcgggggagcggcggggcag
cagggcggtttagtgggtagtggagttcagagtgcagcaacaggagagggcatcgcagac
aacagagatcaagagggtgcgcagtcgacctcctgtgagcagcagagcgaagctgcgccc
ttcaagcctgagggcactgtgcccagtcgtttggcactggggggtcgcggggcatatggc
acgcgctgctggggatcacctgtacggcagaaaaagaaacacactggcatggcaagcatt
gacagcagtgctccagagaccacctcagacagctctcctactctcagtcgacgcccattt
cgaggtggctggactgcagcttcctgggggagaggccaggacagtgacagcattagcagc
tcttcctctgattcacttggctcatcgtcatccagcggctcacgcagagctggaggagga
gccagagccaagagtactgacaccagcaggtataaaggtcgccggcctgaaagccacgct
ccacatgtgcccaaccagccgtctgaggcagctgcccatttttactttgagctggccaag
actgtgctgattaaagctggtggaaacagctccacctccattttcactcaaccctctgcc
agcggagggcatcaagggccccaccgcaacctgcatctgtgtgcctttgaaattggcctg
tatgccctcggcctgcataattttgtgtctccaaactggctgtcaaggacgtattcctcg
catgtatcctggattacaggccaggctatggagattgggagtgctgccctcaacatccta
gtggaatgctgggacgggcacctcacccctccggaggtagcgtcactcgcagaccgcgca
tcgcgagcacgggatcccaacatggtgcgtgctgcggcagagctggctttgagttgcttg
cctcatgctcacgccctcaaccccaacgagattcagagagccctggtgcagtgcaaggag
caggataatgtgatgctggagaaagcttgcatggcagttgaggaggctgcaaagggaggt
ggtgtttatcctgaggtcttgttcgaggtggctcaccagtggtattggctgtacgagcaa
acagtgggtggagggtctgggtcccagcgagagggatccggccgctgtagggccaatggt
ggagcagggagaacgccacccgagggaagctgtggtatcctggataacacgggagccttg
gacccatcaggcgtttcaactgtaactacaacagtgactgcagccgctgtagttcctgtc
atttctgttggctccaccatctaccagtcacacgcgctgcctggctcagccatgggacac
gcgcaaggcctgcatccctacaccaccatccaaacccatctgcctacggtctgcaccccg
cagtacctgggccacccccttcagcacattccccgtcctgctgtcttccccgtgtctggg
gcggcctacccacaagtgtatgactccaggaaggcgtatcaaagtggttttaagagcatc
tgtttgtcttctcagggaatgcaccctgcttttattggtgctcagtacccattttctgta
gccactggccctcatcctcctatggcagcgactgctgtcactttccctggagttccaatg
ccgtccatgactcagatcgctgtccacccgtaccatactgcagaggcagcccttagcact
actgttgcagcaggagtacactccgcttccaccatccaggccattcagggggcttctcat
ccaggactctcgtcccagcccgcctccctggtcagcgcacccttccctgtggaagacgag
cagcacagtcaacctatcagccagcagggcctgcactacctccactcggcctacagagtc
ggcatgctggccttggagatgttgggaaggagggcccacaacgatcatccaaacaacttt
tcccgtagccccccgtacactgaagatgtcaaatggctgttgggcctggctgcgcgtctt
ggtgtgaaccacgtgtaccagttttgtgtgggggcagcgaaaggtgttcttagtccgttt
gtcctgcaggagatcattatggaggctctgcagaggttaaaccctgcacatatccacgca
cacctccgcactccagccttccaccagctcgtgcagcgctgccagcaggcctacttacag
tatatccaccacaggctgatccatctgactcctgcggactacgacgactttgtgaacatc
atccgaagtgcccgcggagcgttttgcctgactccagttggcatgatgcagttcaatgat
gtgctgcagaacctaaagaggggcaaacagactaaagaactatggcagcggatctcgttg
gagatggccactttctcaccctga
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