Carassius gibelio (silver crucian carp): 128026398
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Entry
128026398 CDS
T08819
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04145
Phagosome
cgib04217
Necroptosis
cgib04620
Toll-like receptor signaling pathway
cgib04621
NOD-like receptor signaling pathway
cgib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128026398
09143 Cell growth and death
04217 Necroptosis
128026398
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128026398
04621 NOD-like receptor signaling pathway
128026398
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128026398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128026398
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
128026398
04090 CD molecules [BR:
cgib04090
]
128026398
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
128026398
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Phagocytosis
Toll-like receptors
128026398
Pattern recognition receptors [BR:
cgib04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128026398
CD molecules [BR:
cgib04090
]
Proteins
128026398
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Hyaluronan
Cell surface receptors
128026398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_14
LRR_Zer-1
LRR_9
LRRNT
LRR_NXF1-5
ThsB_TIR
DUF3557
DUF4327
Motif
Other DBs
NCBI-GeneID:
128026398
NCBI-ProteinID:
XP_052469447
LinkDB
All DBs
Position
A13:complement(18578562..18581711)
Genome browser
AA seq
805 aa
AA seq
DB search
MIVTFGERMIFLCIILILVNAGQGQECTTIIKNREYSCSGKNLTQIPSTLPFTVTSLDFS
FNFLSSLHKCVFPVLLNLEVLDLTRCHIKHIENDTFYNVKNLITLILTGNPITYFGPGCL
DSVNNLQKLFLVDVGLSSLQLQINNLTEVRELRVGTNNIQSLSLPPFMGTFKNFSLLDLH
ANNISIIKSDDTAVLREIGRNMTLILSRNPLFHIEPGAFQGIYLKEFHIQSAFVSLDAQK
ECLEALAGLSVDKLFIGSYRMQWKVKVSDASYLDGLCSVNFNEIYFVLKECSDSEIHLFR
CMINATKITVKRGYFKTMDNTQFHRLKELYLGHTSLSVVPYISHIPSLEKLVVKNNIPMT
FNGIKDLPLLQFVDLSGNFLIMKDCCSQFFHRTPNIRYMNLSQNSEIGMIDKPFSGLDLL
EVLDLHRTKLILVFYFGFLHGLKNLKYLDISYTSITFTRQIFFQNMNNLTVLKIAGNSFR
GDALTYLLQNLTGLEVLDISHCGIEEISRRTFTGTQKIRHLCLSRNKLMILDFLAQPELN
PLTSLYVDKNSIASIPLHVLQNLPTNLLEFDLSFNPIDCSCSQTEFISWIIQNQNTLKQP
ENIFCKTFSPSSDFRATDFDIDSCVHKKRLTIVLSICFVIVVVLLSLLVYRFQFYLQYCC
ILLRGYRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSI
ASNIIDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFMMERNANIIIIILEDVEETK
TKKVFGLHKHLKKNTYLKWSRDPLM
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgacatttggggaacggatgattttcctatgcataatcttgattctggtgaat
gctggacaaggacaggaatgtaccacgataataaagaatagggagtactcatgttctggg
aagaatttgactcaaattcccagcactcttcccttcactgtgacttctctggatttcagt
ttcaatttcttgagctctttgcataagtgtgtatttcctgtattgttgaatttagaagtc
ttggatctcacaagatgccacatcaagcacattgaaaatgatactttctacaatgtgaag
aatttgattactttgattctcacaggaaaccctattacatactttggacctggatgcttg
gattctgtaaataacctacaaaaactatttcttgtggatgttggtctctcatctttacag
cttcaaataaataatctaaccgaggtgcgggagcttagagtcgggacaaataacatccag
tctctgtctctgcctccattcatgggcacctttaaaaacttcagtttacttgatctacat
gccaataatatatccatcatcaaatctgatgacactgctgtgctgcgagagatcggcaga
aacatgactttgattctctctaggaatccattatttcacattgaacccggagctttccaa
ggcatttatctcaaggaatttcacatacaatctgcatttgtttcattagatgcacaaaag
gagtgtttagaagctcttgctggtcttagtgtggataagttgtttattggtagttacaga
atgcaatggaaagtcaaggtgtcagacgcgagttaccttgatggtctttgctcagttaat
ttcaatgaaatatattttgttctgaaagaatgctctgactctgaaatacacttgttccgc
tgtatgatcaatgcaacaaaaatcacagtgaaaagaggatatttcaaaaccatggacaat
actcaatttcaccgtcttaaggagctgtatttaggccacacttcattatctgttgtacca
tatatttcacacatacctagcttagaaaaattagtggtgaagaataatatacccatgacc
tttaatggtatcaaggatttgcctcttcttcagtttgtagatttgagtggaaactttttg
attatgaaggactgctgttcccaattttttcataggacaccaaatattcgttacatgaac
cttagtcaaaactcggagatagggatgattgataagccattttctggattagacttgctt
gaagtattggacctccaccgtacaaaactaatcctagttttttactttggatttttacat
ggtctgaaaaatttaaagtatctggatatttcttacacaagtattactttcacaagacaa
attttttttcagaacatgaacaatctgactgtgcttaaaattgcgggaaacagttttcgt
ggagatgcattgacttatctcttacaaaatctaacaggcttggaggttcttgatatctca
cactgtggcattgaagaaatctccagaagaacttttactggcacacagaaaatacggcat
ttatgtttaagtcgaaacaagttaatgattttggattttctggcccaaccagaactaaat
ccccttacatcactttatgtcgataaaaacagcattgctagcatcccacttcatgttctc
caaaatttgcccacaaaccttttagagtttgatctgtcctttaaccccattgattgctcc
tgctcccagacagaatttatttcatggattatccaaaatcagaacactttgaagcaaccg
gaaaatattttctgcaaaaccttttcaccaagctcagattttagagcgacagactttgac
attgacagctgtgtgcacaagaaaagactcacaattgttttatccatatgttttgttata
gtagtagttcttttatcactcttggtttacaggtttcagttttatcttcagtattgctgt
attttactgagaggctacagatcacccggacagcaagaatgttcctatgacgcatttgtg
attttctccagctatgatgaagtctgggtcatgaatgaactgatggagaatctggagaac
ggtgttccaccgattcagctttgccttcatatgcgcgactttcaagcggggaagtccatc
gcctccaacattatcgatgaagggataatgggcagtcgaaaaatcattgtggtcgtatcc
caacacttcattgatagtgcctggtgtcgctttgagtttgaattagctcagtctcgcttt
atgatggagcgcaatgccaacatcatcatcatcattctggaagatgtggaagagacgaag
actaagaaagtgtttggacttcataagcatctgaaaaagaacacatatctaaaatggagc
agagaccctttgatgtga
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integrated database retrieval system