KEGG   Carassius gibelio (silver crucian carp): 128026398
Entry
128026398         CDS       T08819                                 
Name
(RefSeq) toll-like receptor 4
  KO
K10160  toll-like receptor 4
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04145  Phagosome
cgib04217  Necroptosis
cgib04620  Toll-like receptor signaling pathway
cgib04621  NOD-like receptor signaling pathway
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128026398
  09143 Cell growth and death
   04217 Necroptosis
    128026398
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128026398
   04621 NOD-like receptor signaling pathway
    128026398
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128026398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    128026398
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:cgib04054]
    128026398
   04090 CD molecules [BR:cgib04090]
    128026398
   00536 Glycosaminoglycan binding proteins [BR:cgib00536]
    128026398
Membrane trafficking [BR:cgib04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    128026398
Pattern recognition receptors [BR:cgib04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   128026398
CD molecules [BR:cgib04090]
 Proteins
  128026398
Glycosaminoglycan binding proteins [BR:cgib00536]
 Hyaluronan
  Cell surface receptors
   128026398
SSDB
Motif
Pfam: LRR_8 LRR_4 TIR TIR_2 LRR_14 LRR_Zer-1 LRR_9 LRRNT LRR_NXF1-5 ThsB_TIR DUF3557 DUF4327
Other DBs
NCBI-GeneID: 128026398
NCBI-ProteinID: XP_052469447
LinkDB
Position
A13:complement(18578562..18581711)
AA seq 805 aa
MIVTFGERMIFLCIILILVNAGQGQECTTIIKNREYSCSGKNLTQIPSTLPFTVTSLDFS
FNFLSSLHKCVFPVLLNLEVLDLTRCHIKHIENDTFYNVKNLITLILTGNPITYFGPGCL
DSVNNLQKLFLVDVGLSSLQLQINNLTEVRELRVGTNNIQSLSLPPFMGTFKNFSLLDLH
ANNISIIKSDDTAVLREIGRNMTLILSRNPLFHIEPGAFQGIYLKEFHIQSAFVSLDAQK
ECLEALAGLSVDKLFIGSYRMQWKVKVSDASYLDGLCSVNFNEIYFVLKECSDSEIHLFR
CMINATKITVKRGYFKTMDNTQFHRLKELYLGHTSLSVVPYISHIPSLEKLVVKNNIPMT
FNGIKDLPLLQFVDLSGNFLIMKDCCSQFFHRTPNIRYMNLSQNSEIGMIDKPFSGLDLL
EVLDLHRTKLILVFYFGFLHGLKNLKYLDISYTSITFTRQIFFQNMNNLTVLKIAGNSFR
GDALTYLLQNLTGLEVLDISHCGIEEISRRTFTGTQKIRHLCLSRNKLMILDFLAQPELN
PLTSLYVDKNSIASIPLHVLQNLPTNLLEFDLSFNPIDCSCSQTEFISWIIQNQNTLKQP
ENIFCKTFSPSSDFRATDFDIDSCVHKKRLTIVLSICFVIVVVLLSLLVYRFQFYLQYCC
ILLRGYRSPGQQECSYDAFVIFSSYDEVWVMNELMENLENGVPPIQLCLHMRDFQAGKSI
ASNIIDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFMMERNANIIIIILEDVEETK
TKKVFGLHKHLKKNTYLKWSRDPLM
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgatcgtgacatttggggaacggatgattttcctatgcataatcttgattctggtgaat
gctggacaaggacaggaatgtaccacgataataaagaatagggagtactcatgttctggg
aagaatttgactcaaattcccagcactcttcccttcactgtgacttctctggatttcagt
ttcaatttcttgagctctttgcataagtgtgtatttcctgtattgttgaatttagaagtc
ttggatctcacaagatgccacatcaagcacattgaaaatgatactttctacaatgtgaag
aatttgattactttgattctcacaggaaaccctattacatactttggacctggatgcttg
gattctgtaaataacctacaaaaactatttcttgtggatgttggtctctcatctttacag
cttcaaataaataatctaaccgaggtgcgggagcttagagtcgggacaaataacatccag
tctctgtctctgcctccattcatgggcacctttaaaaacttcagtttacttgatctacat
gccaataatatatccatcatcaaatctgatgacactgctgtgctgcgagagatcggcaga
aacatgactttgattctctctaggaatccattatttcacattgaacccggagctttccaa
ggcatttatctcaaggaatttcacatacaatctgcatttgtttcattagatgcacaaaag
gagtgtttagaagctcttgctggtcttagtgtggataagttgtttattggtagttacaga
atgcaatggaaagtcaaggtgtcagacgcgagttaccttgatggtctttgctcagttaat
ttcaatgaaatatattttgttctgaaagaatgctctgactctgaaatacacttgttccgc
tgtatgatcaatgcaacaaaaatcacagtgaaaagaggatatttcaaaaccatggacaat
actcaatttcaccgtcttaaggagctgtatttaggccacacttcattatctgttgtacca
tatatttcacacatacctagcttagaaaaattagtggtgaagaataatatacccatgacc
tttaatggtatcaaggatttgcctcttcttcagtttgtagatttgagtggaaactttttg
attatgaaggactgctgttcccaattttttcataggacaccaaatattcgttacatgaac
cttagtcaaaactcggagatagggatgattgataagccattttctggattagacttgctt
gaagtattggacctccaccgtacaaaactaatcctagttttttactttggatttttacat
ggtctgaaaaatttaaagtatctggatatttcttacacaagtattactttcacaagacaa
attttttttcagaacatgaacaatctgactgtgcttaaaattgcgggaaacagttttcgt
ggagatgcattgacttatctcttacaaaatctaacaggcttggaggttcttgatatctca
cactgtggcattgaagaaatctccagaagaacttttactggcacacagaaaatacggcat
ttatgtttaagtcgaaacaagttaatgattttggattttctggcccaaccagaactaaat
ccccttacatcactttatgtcgataaaaacagcattgctagcatcccacttcatgttctc
caaaatttgcccacaaaccttttagagtttgatctgtcctttaaccccattgattgctcc
tgctcccagacagaatttatttcatggattatccaaaatcagaacactttgaagcaaccg
gaaaatattttctgcaaaaccttttcaccaagctcagattttagagcgacagactttgac
attgacagctgtgtgcacaagaaaagactcacaattgttttatccatatgttttgttata
gtagtagttcttttatcactcttggtttacaggtttcagttttatcttcagtattgctgt
attttactgagaggctacagatcacccggacagcaagaatgttcctatgacgcatttgtg
attttctccagctatgatgaagtctgggtcatgaatgaactgatggagaatctggagaac
ggtgttccaccgattcagctttgccttcatatgcgcgactttcaagcggggaagtccatc
gcctccaacattatcgatgaagggataatgggcagtcgaaaaatcattgtggtcgtatcc
caacacttcattgatagtgcctggtgtcgctttgagtttgaattagctcagtctcgcttt
atgatggagcgcaatgccaacatcatcatcatcattctggaagatgtggaagagacgaag
actaagaaagtgtttggacttcataagcatctgaaaaagaacacatatctaaaatggagc
agagaccctttgatgtga

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