Carassius gibelio (silver crucian carp): 128026419
Help
Entry
128026419 CDS
T08819
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1-like isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
128026419
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128026419
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
128026419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
128026419
NCBI-ProteinID:
XP_052469492
LinkDB
All DBs
Position
A13:complement(19198552..19455421)
Genome browser
AA seq
1238 aa
AA seq
DB search
MLVVADGNGSYGSSSRMSSNINLNKNKDSSVSISKMDLIIPFSPEVPCDNNGQRMWWAFL
ASSMVTFFGGLFIILLWRTLKYLWTVCCHCNIKNKEAQKVNNPMNSQADGPTKNQNDKED
VPVSEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNFY
KDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLG
LRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWEN
FQNSQPLSYWECVYLLMVTMSTVGYGDVYARTTLGRLFMVFFILGGLAMFASYVPEIIEL
IGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNL
ELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVI
SIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLST
MLANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLL
IAIEYKSEQRESSILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRI
KKCGCKRTKYKFNGYVRSLEDEHPSTLSPKKKQRNGGMRNSPNCSPKMTRHDPLLIPGNE
QIENMDTSVKRYDSTGMFHWCPSNDIEKAILTRSEASMTVLSGHVVVCIFGDVTSALVGL
RNLVMPLRASNFHYHELKPIVFVGSLDYLKREWETLHNFPKVSILPGTPLSRADLRAVNI
NLCDMCVILSANQSNIDDASLQDKECILATLNIKSMQFDDSIGILQANSQGFTPPGMDRS
SPDNSPVHGLVRQTSITTGSNIPIITELAKPGKLLPLVSFSQEKNSGNNIQMITELVNDS
NVQFLDQDDDDDPDTELYLTQPFACGTAFAISVLDSLMSATYFNDNILTLIRTLVTGGAT
PELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKT
YNMLCFGIYRLRDAHLSTPGQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRVSL
SHSSHSSHSSSKKSSSVHIPATNRQNRSSKAREARDKQNATRMNRMGPEKRWFTDEAENA
YPRNIQIKPMSTHMANQVNQYKSTSSLIPPIREVEDEC
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgctagttgtggcagatggcaacggatcctatggcagcagctctagaatgagcagtaat
atcaatctgaataaaaacaaggactcttctgtctctatatcgaagatggacctgatcatc
ccgttctcaccagaagtaccctgtgacaacaatggtcagcgcatgtggtgggctttcctc
gcctcatccatggtgacgttcttcgggggtctcttcatcatcctcctgtggaggaccctt
aagtacctgtggacggtctgctgccattgcaacatcaaaaacaaggaggcacagaaggtg
aataaccctatgaacagtcaggctgatggcccaacgaagaaccagaatgataaagaggat
gtcccagtcagcgaggtgggctggatgacctcagtcaaagactgggcaggggtcatgatc
tcagcacagacccttactggcagagttctggtggtgttggtctttgcactcagcatcgga
gctctgggaatatacttcatagattcttcagatcctatagaatcctgtcagaatttctac
aaagacttcacattacaaattgacatggcattcaacgtgttcttcttactctactttggc
ctgcgtttcatagcagctaacgataagctgtggttctggttggaggtgaactcagtggtg
gacttcttcaccgtaccgcctgtgtttgtgtcagtgtatctgaacaggagctggctgggt
ctgaggtttctaagagccttgagattgatacaattctcagaaattttacagtttttgaat
atcttaaaaacaagtaattccatcaagctggtgaacctgtgttccatcttcataagcaca
tggctcactgctgcaggattcattcatctggtggaaaactcaggggatccatgggagaac
ttccaaaactctcagccgctctcatattgggaatgtgtgtacttattaatggtcactatg
tccacggtgggatatggagacgtctatgcaagaaccactcttggacgccttttcatggtc
ttcttcattctcggtggtctggccatgtttgccagctacgtccctgaaatcatagagtta
ataggaaaccgcaagaaatatggtggttcctatagtgcggtaaatggcagaaagcacatt
gtggtctgtggtcatatcacgctcgaaagtgtttccaacttcctcaaagacttcctacac
aaggacagggatgatgttaatgtagaaatcgtttttcttcataatatttcccctaatctt
gagctggaagccttgtttaaacgtcacttcactcaggtggaattctatcaaggttcggtc
ctcaacccacatgatctagcaagagttaagattgagtcagcggatgcctgcttgattctt
gcaaacaaatactgtgcagaccctgatgctgaagatgcctctaatatcatgagagtaata
tctataaagaactaccatccaaagatcagaataatcactcaaatgttgcagtaccacaac
aaggcccatctgctaaacattcccagctggaactggaaggagggtgatgatgcgatctgc
ctggccgagctgaaggcaggcttcatagcccagagctgcctggcacagggcctgtccacc
atgctggccaacctcttctccatgaggtcatacatcaagattgaggaggacacatggcag
aagtattatctggagggagtggccaatgaaatgtacactgagtacctgtccagtgccttt
gtggggctttcatttcctacagtttgtgagctgtgctatgtgaagctcaagttgttgttg
atcgctattgaatacaagtccgagcagagggaaagcagtattctgatcaacccggggaat
catgtaaagatgcaggaggggacactgggattctttatcgccagcgacgccaaagaggtg
aaaagagcatttttctactgcaaagcatgtcatgatgacatcacagatcccaaaaggatt
aaaaagtgtggctgcaagagaaccaaatacaagtttaacggatatgtcagatcactcgaa
gatgagcatccgtcaacactgtcgcccaaaaagaagcaacgcaacggaggcatgcgaaat
tcacccaactgctcacccaaaatgacgagacatgaccctctactcattccgggaaatgag
cagattgagaacatggatacaagtgtgaaaagatacgactctactggaatgtttcactgg
tgtccatccaacgatattgagaaggccattctgacacgaagcgaggcctccatgacggtt
ttaagtggacatgtagtagtgtgtatatttggagatgtcacgtcagctttagtggggctt
cgaaacctggtgatgcctttgagagcaagcaacttccactaccacgagctaaagcccatc
gtgtttgtgggctcattagattatctgaaaagagagtgggaaacccttcacaacttcccc
aaagtctccatcttacctggtacaccattaagtcgagctgatttaagggccgtcaacatc
aacctctgtgacatgtgcgttatcctgtcagccaatcagagcaatatcgacgatgcttca
ctgcaggacaaggaatgcatcttggcgactcttaacatcaaatctatgcagtttgatgac
agcattgggatcttgcaggctaattcccaaggtttcacacctccggggatggataggtct
tctccagataacagtccagtgcacggcttagtgcggcagacatccatcaccacgggatca
aacatcccgatcataactgaacttgctaagcctggcaaactactgcctttggtttcattc
agtcaggaaaaaaacagtggaaacaacatacaaatgataacagaactggtgaatgactcc
aacgttcagtttttggaccaagacgacgatgacgacccagatacggagctgtatctgacc
cagccgtttgcctgcggtactgcgttcgccatcagcgtgttggactccctgatgagtgcg
acatacttcaatgataatatcctcaccctgatccggacgctggtcacaggaggcgccact
ccggagctggagggcctgctagctgaggagaacgcgctgagaggtggctacagcacgccg
cagacgctggctaacagggacaggtgtcgggtcgcccagctggccctctacgatgggccc
ttcgcagacttgggggatggcggttgctacggagacttgttttgtaaagcattaaaaaca
tacaacatgctgtgctttgggatctatagattgcgcgatgcacatttaagtacaccaggc
cagtgcacaaaaaggtatgtcatcacaaacccaccttatgagtttgagctggtgcccacg
gacctgatcttctgtctgatgcagtttgaccacaatgcgggccagtcccgagtgagcctg
tcccactcctcccattcctctcattcatccagcaagaagagctcgtctgttcacatcccc
gccaccaatcggcagaaccgcagcagcaaagcacgtgaagcccgtgacaaacagaatgca
acaaggatgaatagaatgggcccagaaaagagatggtttacagatgaagcagaaaacgca
tacccaaggaacattcaaatcaagcccatgagcactcacatggccaaccaagtcaatcaa
tacaaatccactagcagtctgattccacccatccgagaagtcgaagatgaatgctga
DBGET
integrated database retrieval system
