Carassius gibelio (silver crucian carp): 128026441
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Entry
128026441 CDS
T08819
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128026441
04121 Ubiquitin system [BR:
cgib04121
]
128026441
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128026441
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128026441
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
GLE1
Phage_zn_bind
Motif
Other DBs
NCBI-GeneID:
128026441
NCBI-ProteinID:
XP_052469562
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All DBs
Position
A13:19964796..19967639
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AA seq
629 aa
AA seq
DB search
MSQPETSAAAADDLVPKRRSTSKIWQFFGFKRDDHMQTEVICKTCKSRVATKTGNTSNLF
SHLKAKHNDLYQLCSAEKSSSSGESTLVHQPKQQSISSSFESITPYPVSSRRHREITEAI
TRYLAKDMVPIATVGKPGFLHLMNTIDKRYNIPSRTYFSRIAIPQMYEHTRNRVMLELRD
VEHFACTTDLWSSRTTEPYISLTVHFIDKAFKMRSLCLQTAYFPSEHSGENIALGLREAL
SGWNLNEARLVCFTTDNATNMIKAAEINGWPRLQCFGHRLHLAIENAVKCDTRISRALGV
CKKLVGHFSHSWKKKEALKKAQRELNLPEHGLITECPTRWGTKQQMMERILEQQRALSQV
LSENRSTRHLVPSWQDIEVLESVNKALKPLQDFTDALSGEEYVSISYLLPVLRLLNTQTL
AADEEDTELTCSIKTKVLGYMEAKYEDPATQTLLNIATFLDPRFKKDYIPKEQWEEISLR
IKSEMKEAQPAVAISSSSVGAAVSGAEAEPCQSATATSTKRMKKSLGSLLQTSVTSPSES
SDHATIEAEFNSYILIPKIHSEQDPLAWWGIHKVNFPHLSKLAEKYLCVPATSTPSERLF
STSGNVVTCQRASLKPNKVDMLVFLSKNL
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcctgagacatccgcagctgctgccgacgatttagtgccaaaacgaagaagc
acctcaaagatatggcagttttttggatttaaaagagatgaccacatgcagactgaagtt
atatgtaaaacatgtaaatctcgtgtagcaacgaaaacgggaaacacttcaaatctgttc
agtcacctcaaagcaaagcacaacgatttgtatcagctatgctctgcagaaaaatcttca
agctcaggtgaatcaaccctcgttcaccaacccaagcaacaatccatatcatcaagcttc
gaaagcataacaccatatcctgtaagttcccgccgtcatagagagataaccgaggccatt
acacgctatctggcaaaggatatggttccgatcgccacagtcgggaaaccagggtttttg
cacctgatgaataccatcgacaaacggtacaacattccctctcgaacctatttttcacgc
attgctatcccccaaatgtacgagcatactcgcaaccgtgtcatgttggaactgagagat
gtcgaacattttgcgtgtacaacggacctctggtccagtaggacaacagagccgtacatt
agtttaacggttcactttattgacaaagcctttaagatgagaagtctgtgcttacagaca
gcatatttccccagtgaacacagtggggaaaacatagcgctgggactgcgagaggctttg
tctggctggaatttgaatgaggcgcgtctagtgtgttttaccactgacaacgcaaccaat
atgatcaaagcggcggaaataaatggttggccccgactacagtgcttcgggcacagactg
caccttgctattgaaaatgcagtcaaatgtgacacacgcatcagtcgtgctctaggagtg
tgcaaaaagctagtgggacatttttcccatagctggaaaaagaaagaagcgctaaagaaa
gcacagagagagcttaacctgccagaacatggtctgatcacagagtgccctacacgatgg
ggcactaagcaacaaatgatggaaaggatcctggaacagcagagggctctgtcacaagtt
ctctctgaaaatcggagtacaagacatctggttccatcttggcaggacattgaggtcctt
gagtccgtaaacaaggcattgaagccacttcaagattttacagatgctttgtctggggaa
gaatacgtgagcatttcctatctacttccagttcttcgtttactgaacacacaaaccctt
gctgctgacgaggaagacacagagctgacatgctcaattaaaaccaaagtgctgggctac
atggaggcaaaatatgaggatcctgcaacccaaactctcttgaacattgccactttttta
gatccaaggttcaaaaaagactacattcctaaggaacaatgggaagaaattagtttaagg
ataaaatcagaaatgaaggaggcacaacctgctgttgccatatcatcatcatcagtgggt
gctgctgtgtcaggtgctgaggctgagccatgtcaaagtgccacagccacaagtacaaag
aggatgaagaagtctttaggaagtctcttacagacctcagtcacatctccctctgaatcc
tctgaccatgcaaccattgaagcagaatttaacagctacattctgatccccaaaatccac
agtgagcaggaccctttggcatggtggggaattcacaaggtaaatttcccccacttaagc
aagctggcggaaaaatatctttgtgtgcctgccactagcacaccatctgaaagacttttc
agcacatcaggcaatgtagttacatgtcagcgtgcatccctgaaaccaaacaaagtggac
atgctggttttcttgtccaaaaatctttaa
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