Carassius gibelio (silver crucian carp): 128026669
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Entry
128026669 CDS
T08819
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128026669
04121 Ubiquitin system [BR:
cgib04121
]
128026669
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128026669
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128026669
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
128026669
NCBI-ProteinID:
XP_052469883
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Position
A2:12318603..12321532
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AA seq
637 aa
AA seq
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MEKDKHADKEIPQTNPEQQEEELVVKRGATSVVWTWFGFTKADKEQKNVICKLCHANVTV
SHGSTSNLFYHLKVKHVKAYNESQQMRSTSGVPSTCGAKSKKQSQTSLAESFTRGTPYDK
TSRRWKEITQAITMHICKDMSPVYTVEKKGFRDLIKTLDHRYVMPSRKHFSEVELPRLYG
ECRRKIEAELRDALYFSTTTDLWTSRTTQPYMSLTIHFIKDWTLCSRCLQTSYFPEDHTG
EMIAQSLKEALQSWELREDHQVCVTTDNATNNIKALQLNDWTRLQCFAHRLHLAIERGVK
VPQVDRAIGVCKKIVSAFSNTWKRQRELAIAQVQLGLPTHKLITESPTRWGSRQQMIERV
IEQEKALTQVLQADKKTRHLALTWQDMDVLESVNKALCPLVEFTDALSGEQYVSVSYLKP
VLYLFNEQVLKPQDDDTQLTRDIKVNILDYLNEKYADESTQELLDMASLLDPRFKTTYIN
AERVDYMKTRAAAEMESLAADPKRPVEGVSVPLAEDAGENSECPTKKQKKSLGSFFKIAS
RQRQAVPQSERESIEMELNSYLQAVEVDGETNPLEWWRQHEANFPHVASLAKKYLCIPAT
SAPSERAFSTSGNIVTCRRSALKPERVDQLVFLAHNL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagataagcatgctgataaagaaatcccacaaaccaatcccgagcagcaggag
gaggaacttgttgtgaaacgaggcgcgacatcagtggtatggacgtggttcgggtttaca
aaggctgacaaagagcagaaaaatgtgatttgcaaactgtgtcacgcgaatgtaaccgtt
agccacggtagcacgagtaacttgttttatcatctaaaggtgaagcatgtcaaagcatac
aatgaaagccaacagatgcgctccacatcaggtgttccgtcaacctgtggtgctaaaagc
aaaaaacaatctcaaactagtttggccgaatcatttaccagaggcactccatatgacaaa
acctcacgcagatggaaagaaataacgcaagccattacaatgcatatctgtaaagacatg
tcaccagtttacacagtggaaaagaagggatttcgtgatctaatcaaaacgcttgatcat
agatatgtaatgccgagccgcaagcactttagtgaagtagagttgccgcggttgtatgga
gaatgccgacggaaaattgaagcggagcttcgcgatgctttatacttctcaacaacaact
gatttgtggacaagtcgaactacacagccatatatgagcttaacaatccacttcatcaaa
gactggacattgtgcagtagatgtctgcagacttcctattttcctgaggatcacacggga
gagatgatagctcaaagcttaaaggaagcgcttcagtcatgggaattacgagaggatcat
caagtctgtgtcacaactgataatgcaacgaacaacatcaaagcactgcaactaaatgac
tggacgcggttacagtgttttgctcatcgtcttcatttagccattgagagaggtgtaaaa
gtgccccaagttgaccgcgcaattggggtgtgcaagaaaattgtgagtgccttctcaaac
acttggaaaagacagcgtgaactggccatagctcaggtgcagctaggcttgcctactcac
aagcttatcactgagagtccaacaagatggggatccaggcaacaaatgatcgaaagggtc
attgagcaggaaaaagccctaacacaagtcctgcaagctgacaaaaagaccagacatttg
gctctgacatggcaggacatggacgttcttgaatctgtaaataaggcattatgcccactc
gtagagtttacagatgccctgtctggggaacagtatgtaagcgtttcatacttgaaaccc
gtgctttatctttttaatgaacaggttcttaagccacaggatgatgacacgcagctcacc
agggacattaaggtgaacattcttgactatttgaatgaaaaatatgcagatgaatccacc
caggagctgcttgacatggcttcccttctcgaccctcgcttcaaaaccacatacataaat
gccgaacgagtggactacatgaagaccagagctgcagcagagatggagagtcttgcagct
gatccaaaaaggcctgtcgagggagtctcagtgccactagctgaagatgctggagaaaat
tcagaatgtcctactaaaaaacagaagaaaagtttgggaagcttcttcaaaattgcttca
cgccaacggcaagctgtcccccagtcagaaagggagtccattgaaatggaacttaacagc
tatttacaggcagttgaagtggatggtgagaccaaccccctggaatggtggaggcagcac
gaggctaattttccacatgtggccagcctggcaaaaaaatatctgtgcatccctgccaca
agtgctccatctgagcgtgctttcagcacaagtgggaatattgtcacatgccgcagatca
gcactaaaacctgagagagttgaccagcttgtttttcttgcacacaatttgtaa
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