Carassius gibelio (silver crucian carp): 128026753
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Entry
128026753 CDS
T08819
Name
(RefSeq) homeobox protein six1a-like
KO
K15614
homeobox protein SIX1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128026753
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
128026753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
128026753
NCBI-ProteinID:
XP_052469978
LinkDB
All DBs
Position
A13:10423574..10425976
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AA seq
283 aa
AA seq
DB search
MSILPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSTHSHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAETKERENSENSCVGGKQSQRSSLDGVKSLMSSSEDEFTPPQSPEHNPVLLLQGNMNNH
GAPAYPMPGLGAQHSVHSMQGHPHQIQDSLLGSLTSSLVDLGS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcttgccctctttcggttttacgcaggagcaggtcgcgtgcgtctgcgaggtg
ctgcagcagggtggaaatctggagaggctcggacgtttcctttggtccctaccagcctgt
gatcacctccacaagaacgaatccgtgctgaaagcgaaggccgtggtggccttccaccgg
ggaaacttccgtgagctctacaagatcctggagagccaccagttctccacgcacagccac
cccaagctgcagcagctgtggctgaaggcgcattacgtggaggcagaaaagttgcggggc
cgcccgctaggcgctgtgggcaaataccgagtgcgtagaaaatttcctctgccccgtacg
atctgggacggtgaggagaccagttactgctttaaggagaagtcgcggggcgtgctgcgt
gaatggtacacgcacaatccttatccatctccacgggagaagcgggagctggcggaggca
acgggactgaccaccacacaggtcagcaactggtttaaaaacaggaggcagagggaccgg
gcagctgagacaaaagagagagaaaacagcgagaacagctgcgttggcggtaagcagagc
cagcggtcttcgctcgacggagtgaagtcgctcatgtccagctcggaagatgagttcact
ccgccgcagagccccgagcacaaccccgtgctgcttctgcaggggaacatgaacaatcac
ggagctccagcatacccaatgcccggcctcggtgcgcaacattcggtgcatagcatgcaa
ggacatccgcaccagatccaggattcactgttgggatctctaacatccagccttgtggat
ttaggatcttaa
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