Carassius gibelio (silver crucian carp): 128026856
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Entry
128026856 CDS
T08819
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128026856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128026856
03036 Chromosome and associated proteins [BR:
cgib03036
]
128026856
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128026856
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
128026856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
128026856
NCBI-ProteinID:
XP_052470052
LinkDB
All DBs
Position
A14:complement(23364141..23397755)
Genome browser
AA seq
2036 aa
AA seq
DB search
MSTEILRSSKLNTLATKLHEFVGHSPDEESIDSPDISNGKMAASDSNSPNERMNEPGCSS
EMTKPSSSRSKRKPSSVTKHTAVAESDCVNESAGEDGMQSGQDLSKLPQGTVVVKPEPAA
NEAKDEFHGPEFRSRGSKVKEEGTRKRPDEQLQEIFNCTACGQQVNHFQKDAVFQHPALH
VLICKSCFRYYMSDDINKDEDGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLGRKEL
SEIMDEESKWHCYVCRPEPLQDIVKTCEKVLLSLESSYRKPKGDTDKTKREDRKHKHSKR
EKTAVNGQDYASDGAGSLSFSCKTLTVPKELVKKTKKLIETTNGLNRTFVQFLQQTSKGS
DASAVSNRHLKAFKSVLADLKKAHMALEESLEEEFESKGLKFQNGEEQRPAHSQTADRTV
VNSNHADPAPVREDGLDCPTKNQNPVVEENENQQECNSADVEMKESLPPSPEEPQDQSEE
SEAQDQEMADNPDFEDCSVPAGEASLDKDIVSVPTSVPEELFEMVESLAVKKENCDNGSS
NESIDGKSTSKAEVVVSNNSLTKLGRKLVVKLTPVPLKITIKRDESKEQSPSEDMNCDTL
PKKGQDSRRSPRMKTTPLRKSPEVKSRRKPRSSTAKEEPSAAVKEPCDSDSDEVPEVLQK
AALKASSDESQPESASGKGTKKKNLEKAKAKPKRKLEMASSDSEKSSTAKKRSTKKNKGR
ESDSSNHNSDLEKQIKNLSKLDSGEKRSKGVKKQENESSKEGKKAPTRSSERKRGSQREK
PKTKEELSSSDEEQEEEEQAANSDEDSDQQKIKPILESVMASIDGFHQSSGDEIELKAES
SSQVMDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDGDSPKKGKDGAKKQD
ETDEEDETSDSGSDVDVKKGGRRHRLLRKKLTLSEGDSEDETTVKKKKETKKRGRRKVDS
DDSADSDFEQSSSGSSDASALSEAVSEDGGEEKSSRRKTRSSNKAGKDGERSYHKEKKKR
RRIKIQDSSSSGKSGGEEDGEDEGDEKGTPKNRKKIRKIIKDDSLRTETRDALKEEEERR
KRIAERERLREKLRETIVVEESSQVACPITTKLVLDEDEETKEPIVQVHRNLVTKLKPHQ
VDGVQFMWDCCCESVKKVKKSSGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLNFSTALV
VCPLNTVLNWLNEFEKWQEGLGDEESLEVQELATVKRPQXRAYALQRWQEDGGVMIIGYE
MYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHVLKNEASAVSKAMNSIKTRRRV
VLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLVDVRVMKKRA
HILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLSPIQCKLYRYYLDHFTGVGSALESG
RGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEESSMSLTS
EDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEVRAPNSS
PGSPSPDWYKEFVTETDSEVLEHSGKMVLLFEILRMAEELDEKVLVFSQSLISLDLIEDF
LELAGRAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNALTRKKWAEEFNDTSNVRGRLFLI
STRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVRTVFVYRFLAQGTMEEKI
YDRQVTKQSLSFRVVDQQQIERHFTMNELTELYAFEPDQLDDPSEKKSKRATPMLPKDPF
LAELLHSYKDHIVCYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRINQPSYSQ
MGVGAGPNSYFPFNVAALASMSNQQLEDLINQGRQKVIEATNALKLVPREPLEDIVAQVW
KENPSLPEAQVHSMALGRQASYEMEIKHREAAYRDVLGKQQTLMMYVQKVLANRKVQEQQ
MAMARQGMLLNQLAMQNGLAAPMNQMDLLGLYQQLGALQGLPSSQLGKNPGPSKGL
NT seq
6111 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggagatcttaaggtctagtaagttgaatacattagcgactaaacttcatgag
tttgtgggtcattctccagacgaagaaagcatcgattctccagacatttccaatggtaaa
atggcagccagtgactcaaacagccctaatgagagaatgaatgagcctggttgctcctca
gaaatgaccaaaccctcatcttcacgctcaaagaggaaaccttcatctgtgaccaagcac
actgcggtggctgaatctgactgtgtgaacgagagtgcaggtgaagacggcatgcagagc
ggtcaggatctcagcaagctgcctcaaggcacagtggtggtcaaaccagaaccggccgct
aacgaagctaaagatgagttccacggcccagagtttcgtagcagaggaagtaaagtcaaa
gaggagggcactcggaaacgtcccgacgagcagctccaggagatttttaattgcacagca
tgtggacagcaagtcaatcattttcagaaggatgccgtctttcaacatcccgcactgcat
gttcttatctgcaagtcatgtttcagatattatatgagcgatgatatcaacaaggacgaa
gatggaatggatgagcaatgcagatggtgtgcagaaggcggtaatctgatttgctgtgac
tactgcagcaatgccttctgcaaaaaatgcattttgaggaaccttggacgaaaagagctg
tctgagatcatggatgaagaaagcaaatggcactgctatgtgtgccgcccagagccgctg
caagacattgttaaaacctgcgagaaagttttgctcagtctggaatcgtcgtacagaaag
cccaagggagacactgacaaaacaaagcgtgaagatcgtaaacacaagcacagcaagcga
gaaaaaactgccgtgaatggacaggactacgcctcggacggagcgggatcgttatccttt
tcctgtaagaccttgacggttccgaaagagcttgtgaagaagaccaaaaaactaatcgag
accacaaacggtttgaatcgtacttttgtacaattcctccagcaaacgtcaaaaggcagc
gacgctagtgcagtaagtaatagacacttaaaggccttcaaatcagttttggccgatctg
aaaaaggcccacatggctctggaggaatcactcgaagaagaatttgaatcgaaaggcctc
aagtttcaaaatggagaggagcaaagaccagcacacagtcaaactgcagatcgtacggtt
gttaactcgaaccacgctgaccctgctcctgtcagagaagatggattggattgccccacc
aagaaccagaatccagtggtcgaagagaacgaaaaccagcaggagtgtaactcagctgat
gttgaaatgaaggagagcctcccaccctctccagaagaacctcaggaccagtctgaagaa
agtgaagctcaagaccaagaaatggcagataaccctgactttgaggactgctcagtgcca
gcaggtgaagcgtctcttgataaagacattgtgtctgttccaacgtctgtcccagaagag
ctctttgagatggtcgagagtcttgcagtgaagaaagaaaactgtgacaatggcagctca
aatgagtccattgatgggaaatcaacgtccaaggctgaagttgtggtttccaataacagc
cttacaaaactgggaagaaaactcgttgtcaaactaacacctgttcctcttaaaatcacc
ataaaacgagatgagagcaaagaacagtcgccttcagaagacatgaattgtgacacgttg
ccaaagaagggtcaagatagccgacgctcccccaggatgaagaccacaccgctgcgtaag
tcaccagaggtgaagagcagacgcaaaccgaggtcgtcaacggctaaagaagagcccagc
gccgcagtgaaggagccgtgtgattcagactcggatgaagtccctgaggtcctgcagaag
gctgccttgaaggccagctcggatgagagtcaacccgaaagtgcttctggcaaaggtacc
aagaagaagaatttagagaaagctaaagcgaagccaaagcgtaaactcgaaatggcctcc
tcagattctgaaaagtcatcaaccgcaaagaaaaggagcaccaaaaaaaataagggcaga
gaatctgactcctcaaaccacaactctgatcttgagaaacagatcaaaaacctgtccaag
cttgatagtggggaaaaaagatccaaaggtgtcaaaaagcaagagaatgaatccagtaaa
gagggcaagaaagccccgacaaggtcatccgagaggaaacgagggtcacagagagaaaag
cctaaaaccaaggaggagttatcatctagtgatgaagagcaggaggaggaggagcaggcc
gctaactcagatgaagacagtgatcagcagaagattaaaccaatactcgagtctgtgatg
gctagtattgatggtttccatcagtcatcaggtgatgaaattgaattgaaggctgagtcc
tcctcccaggttatggatgatgacgacgatccagagaacagaattgccaagaggatgctt
ctggcgcagatcaaggccaactattcctctggagcggacagttcgtctgatgatgaaaac
gcagataaagaggatggggattcaccaaagaaaggaaaagacggtgctaagaagcaagac
gaaactgatgaagaggatgaaacctcagactctggctcagatgttgacgtgaagaaaggt
ggacgcaggcaccgtttgttgaggaagaagttgactctaagcgagggagactctgaagac
gagaccaccgtcaaaaagaagaaagaaaccaaaaagagaggcaggcggaaagtggacagc
gatgattcggcagactcggacttcgagcagtcgagctcgggctccagtgatgcatcagcg
ctcagtgaagccgtgagtgaagacggcggtgaagaaaagagcagcagacgcaaaacacgg
tcgtccaataaagctggcaaggacggtgagagaagttaccacaaagagaagaagaaacgg
cgtcgcattaagatccaagactcctcgtccagtggcaagagtggaggggaagaggatgga
gaagatgaaggggatgagaaaggaacacccaaaaaccgtaagaagatccgcaagatcatt
aaagacgacagcctgaggacggagacccgggatgcgctgaaggaggaagaggagaggagg
aagcgcattgctgagagagagcggctgagggagaaactacgagagactatcgtggtggag
gagtcatcgcaggtcgcgtgtcccatcaccacgaagctggtgctggatgaggacgaggag
accaaggaaccaatagtgcaggttcacaggaacctggtgaccaaactcaagccccatcag
gtggacggagtgcagttcatgtgggactgctgctgtgagtctgtgaagaaggtcaagaag
tcttctggctccggatgtattctggctcactgcatggggctggggaaaaccctgcaggtg
gtgacgtttctccacactttgctgctgtgtgagaagctgaacttcagcaccgctctggtg
gtgtgtcctctcaacacggtgctcaactggctcaacgagtttgagaagtggcaagagggc
ctgggagatgaggagagtttagaggtgcaggagctggccacggtgaagagacctcagnng
agagcgtacgctttacagcgctggcaggaggatggcggtgtcatgatcataggctacgag
atgtaccgcaacctcacgcaaggacgaaacatcaagagcaagaagctgaaggaaaccttt
cagaaaactctggtcgatccaggtccagattttgtcatctgtgacgagggtcacgtgctg
aagaacgaagcgtctgctgtctccaaagccatgaactccatcaagactcgtcggagagtg
gtgctgacaggaacgcctctgcagaacaacctgatcgagtatcactgtatggtgaacttc
atcaaggagaacctgctgggatcagtgaaggagttcagaaaccgcttcatcaaccccatc
cagaacggccagtgcgccgactccacgctcgttgacgtccgagtcatgaagaagcgcgcg
cacatcctctacgagatgctggcgggatgcgtccaaagaagggactacactgcccttaca
aaattcttgcctccgaagcacgagtacgtgttagcggtgcggttatcacccattcagtgc
aagctttaccgctactatctggatcacttcacaggtgtcggatctgccttggaaagtgga
cgaggccgcgccgggaccaaactcttccaggatttccagatgctcagcagaatctggacc
catccgtggtgcctccagctggactatatcagtaaagaaaacaagggatacttcgacgag
gacagtatggaggagttcatagcctcagagacagaggagtcctccatgagtttgacctct
gaagatgagaagcccaaaagaaagaagaagcgaggcaaagggaaagagcagagctcagac
aagtctgacagcgatgacctggaagtgattaaggagtggaacaccagttctcgtggagga
aaccctgaggggcgcaaccgagcagagcctgtggaggaggttcgggcgccaaactccagt
cccggaagcccttccccggactggtacaaagagtttgtgaccgagaccgattctgaggtg
ctggagcattctgggaaaatggtgcttctttttgagatcctccgcatggctgaagaattg
gatgaaaaagtgttggtgttcagccagtctctcatttctctggacctcattgaagatttc
ctggagttggcaggcagagccaaagaggaaggcaagctttctccgtacaaaggtgagggc
aagtggttcagaaacattgactactatcgtctagatggttcaactaacgccctgaccagg
aagaaatgggcagaggagttcaatgacaccagtaatgttcggggtcgattgttcctcatc
tcaaccagagctggctctcttgggatcaacttggtagctgcaaacagggtcatcattttc
gacgcctcgtggaacccatcctacgacattcagagtattttcagagtctatcgctttggc
caagtcaggactgtgtttgtctacaggtttttggctcagggaaccatggaggagaagatc
tatgaccggcaagtcaccaaacagtcgctgtccttcagagttgtggaccagcagcagatt
gaacgccactttaccatgaacgaactgacggagctctacgcatttgagcccgaccagctg
gacgatccctctgagaagaagagcaagcgggccactcccatgctgcccaaggatcctttc
ctggcagaactccttcacagttacaaagatcatatcgtctgctaccacgagcacgactct
ttgctggaccacaaggaggaagaggcactgagtgaggaagatcgtaaagcagcctgggcc
gaatacgaggccgaaaagaagggtctgtccatgcgtatcaaccagccgtcttattctcaa
atgggcgtgggagcaggaccaaactcttacttccctttcaacgtggctgccttagcctcc
atgagcaaccaacagttggaggatttgattaaccagggcaggcagaaagtgatagaagcc
actaacgctctgaagttagtgcccagggaaccactggaggacatcgtcgcacaagtgtgg
aaggagaatccgagtttacccgaggcccaggttcactccatggctcttgggaggcaggcc
agctacgagatggaaatcaaacacagagaagctgcttaccgtgatgtcctcggcaagcaa
caaactctgatgatgtacgtgcagaaggtgctcgccaaccgtaaggtgcaggagcagcag
atggccatggcgaggcagggtatgctgctcaaccagctggccatgcagaacggtctggcg
gcccccatgaatcagatggatctgctgggcttgtaccagcagctcggggcgctccagggc
ctcccctcctcacagctggggaagaacccgggcccgtctaagggcctgtag
DBGET
integrated database retrieval system
