Carassius gibelio (silver crucian carp): 128026858
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Entry
128026858 CDS
T08819
Name
(RefSeq) THO complex subunit 2-like isoform X1
KO
K12879
THO complex subunit 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128026858
09122 Translation
03013 Nucleocytoplasmic transport
128026858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128026858
03041 Spliceosome [BR:
cgib03041
]
128026858
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128026858
Spliceosome [BR:
cgib03041
]
Complex C
Other components
EJC/TREX
128026858
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128026858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
128026858
NCBI-ProteinID:
XP_052470058
LinkDB
All DBs
Position
A14:23461762..23515134
Genome browser
AA seq
1570 aa
AA seq
DB search
MAALILPSDWIKNWDKSGKNEFFQFFQDLAGKPSSDEFKDLQTALYELCWHVIQGSLKVE
VAASLLTDVMELRDDMPSVLADVFCILDIETGCLEEKHKRDHFTQLVGACLICVPDGMLK
ERLDPETLESLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDLS
GNLTSHLVLENIKSLIGCFNLDPNRVLDIILEVYECRWEQDEFFIPLIKSYMCEHQTLCH
MLGFKFKFHQEPNGETPSSLYHIAAALLQHNLIALEDLYVHLLPLDSSIVEEHKREILEA
KQIARKLTMVVVPSEKTEDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWQHAQSIMD
QMPAFYATSHKAIAVALCQLLHLLVEPLYRRAAVPKGAKGSLMTPLRSKQAPRPAERFDD
LSRDVFTMLCYLGPHLSHDPILFAKIVRLGKSFMKEYQSESRQDTKDKMDSLLSCFLSIA
DQVLLPSLSLMECNACMSEEIWGFFKLFPYQHRYRLYGQWKNETYGHHPLLVKIKAQTVD
RAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDSLKYLTSL
NYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTNQ
LKAGKSFDLLILKEVVQKMAGIEITDEMTVEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQ
RLKDALLDHELALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQFGGFLASN
LSTEDYIKRVPSVDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKVH
KYIAACEQIMAPVHEAVVSLHLPKVWDDLRPQFYATFWSLTMYDLAVPHNAYDREVNKLK
MQIKAIDENTEMPLNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEKDNWLLAK
STKNETITKFLQLCIFPRCVFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSDIIYT
VASCTENESRRYGRFLCCMLETVTRWHSDRAVYEKECGNYPGFLTIFRASGFDGGNKADQ
LDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQALECR
VHKICQEEKEKRPDLYALAMGYSGQLKGRKVHMVPENEFHLKEQPVRSATSGTLQNGPGN
TGKPAVAANTSAGKAEEGTAEDSDKSKDKSQAAQKAASKNSTTANKVNSSNGSSTPNSTK
GSKEKEDKEKTTKEKKEKKDKNPASTPEAKAGGKDKQKEEKPTDSKEKTPKADKDKRKDD
KKEEKSKIDGKSAEKEWSKERDVSNDSKTKEGSKVEKSAGTGSMKSLVPRSEGVESERAE
QKRRKLDAHSSPSHSSAVKDNLNDFKDSASKHHPNHSTVLPKSKEKDEEKKESDKSRDRS
NEREKKEERKDRKRVSGSVPDAVKGSGHLDYSNSDREMSQEAKRRKDENGMSSSKHSKSA
SPSESPHSNDKDSSKRSKSTSKDKSELAKPEKTSGGKKESRHDKEKSEKKRDSTGAKEEK
KHHKSSEKHR
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgatcctcccgtctgactggatcaaaaactgggacaaatccggcaaaaat
gagtttttccagttcttccaggaccttgcggggaaacccagcagtgacgagtttaaggat
ctgcagacggccctgtacgagctctgctggcatgtgatccagggcagtctgaaggtggag
gtggctgccagtctcctgactgatgtaatggagctgcgggatgatatgccttctgtttta
gctgatgttttctgtatattagatattgagacgggctgtttggaggagaaacacaagcga
gatcattttacccagctggttggagcctgtctgatctgtgttcctgacggtatgctgaag
gagagattggatccggaaacgctggagtctctggggctgatcaaacaggctcagcagttc
aaccagaagattgtcaaaatcaagaccaaactattttacaaacagcagaagttcaatttg
ttgcgtgaggagaatgaaggctacgctaagctgatcacggagcttgggcaggatctgtcg
gggaatctcaccagccacctcgtcctggagaacatcaagtcattaataggatgtttcaat
ctggacccaaaccgtgtgctggacatcatcctagaggtgtacgagtgccgctgggagcag
gatgagttcttcatccctctgatcaagtcctacatgtgcgagcaccagaccctctgccac
atgctgggcttcaagttcaagttccaccaggagcctaacggagaaacgccatcatctctg
taccacatcgctgcagctcttcttcaacacaatctcatcgctcttgaagacctctacgtt
catctcctcccactggattccagcatcgtggaagagcacaagagagagatcctggaggcc
aagcagatcgcccgcaagctcaccatggtggtcgtcccctcggagaagaccgaggacaag
gagaaagaaaaggagaaggaagaggagaagaacgagaagcctcctgataaccagaagctg
gggctgctggaggcgctgctgaggatcggtgactggcagcacgctcagagcatcatggat
cagatgccagctttctacgccacctcccacaaggccatcgccgtcgcactgtgccagctg
ctgcacctgctcgtggagccgctctaccgcagggctgcagtccccaaaggtgccaaaggc
agtttgatgacgcctctgcggagcaaacaggcaccgcggccggccgaaagattcgacgat
ctctccagggacgtcttcaccatgctgtgctacctgggccctcacctgtcccacgacccc
atcctgtttgccaagatcgtgcgactgggcaagagtttcatgaaagagtaccaaagtgaa
agcaggcaagacacaaaggacaaaatggactctctgctcagctgttttctcagtattgct
gatcaggtgctgttaccgtctctctcgctcatggagtgcaacgcctgcatgtctgaagag
atctggggcttctttaaactcttcccctaccagcacaggtatcgtctctatggacagtgg
aagaatgagacgtacggccatcatccactcctggtgaagatcaaggctcagacggtagac
cgagccaaatacatcatgaagcgactgactaaggagaacgtgaagccctcaggaaggcag
attggaaagttgagccacagtaaccccactattctctttgattatatcctgtctcagatc
cagtggtacgataacctcataactccggtggtggactctctcaaatacctcacgtccctc
aactatgatgtgctggcctattgcattattgaagctttagccaacccagagaaagagaag
atgaagcacgatgacaccaccatttcatcatggctgcagagtctcgctagtctttgtgga
gcggttttcaggaagtatcccatcgagttagctggtcttctgcagtatgtgaccaaccag
ctgaaagcaggcaagagttttgacctgctgatcctgaaggaggtggtgcagaagatggca
ggaattgagatcacggatgaaatgactgtggagcagctggaggccatgacgggtggagaa
cagctcaaagcggagggtggctactttggacagatcaggaacactaagaagtcgtctcag
cgcctgaaggatgctcttctggaccacgagctggcgttaccgctgtgtctcctgatggcc
cagcagaggaacggggtggtcttctctgaggggggagagaagcatctcaaactcgtgggg
aagctttatgatcagtgtcacgacacgcttgtacagtttggtggcttcttggcgtctaac
ctcagcacagaagactacatcaaaagggtgccgtcagtggatgtcctctgcaaccagttc
cacacgccacacgacgccgccttcttcctctctcggcccatgtatgcccatcagattctg
tccaagtacgacgagctgaagaaggcagagaagggcaaccggcagcagcagaaggtccat
aagtacatcgccgcctgcgagcagatcatggccccagtgcacgaggctgtcgtctctctt
cacttgcccaaagtgtgggatgaccttcgacctcagttctacgccaccttctggtccctc
accatgtacgacctggcggtgccgcacaacgcctacgaccgcgaggtcaacaagctgaag
atgcagatcaaggccatcgatgaaaacacggagatgcctctgaacaaaaagaagaaagag
aaggagcgctgcacagcgctgcaggacaagctgcaggaagaggagaagaagcagctggag
catgttcagagagtcctgcaccgtctcaaactggagaaagacaactggttactggccaaa
tccactaagaatgaaactatcactaagttcctgcagctctgtatcttcccccgctgcgtc
ttctcagccattgatgccgtttactgcgctcgcttcgtggagctggtgcaccagcagaag
acgcccaacttctgcaccctgctctgctacgaccgagtgttctctgatatcatctacacg
gtggcgagctgcacagagaacgagtcgcgccgctacggccgcttcctgtgctgcatgctg
gagacggtgacgcgatggcacagcgacagggccgtctatgagaaggaatgtggcaattat
cctgggttcctgacgattttccgagccagtggtttcgacggagggaacaaagccgatcag
ctggactatgagaatttccggcatgttgtccacaaatggcattacaagttgactaaagcg
tcggttcactgtctggagacgggcgagtacacccacatccgtaacatcctgatcgtgctc
accaagatcctgccctggtaccccaaggtgctgaacctgggccaggctctggagtgccgc
gttcacaagatctgccaggaggagaaagagaagaggcccgatctctatgcattagccatg
ggctactctggccaattgaaaggcaggaaagtgcacatggtgccagaaaacgagttccac
ctaaaggagcagccagtgcgcagcgccacgtctggcactctgcagaacggaccgggcaac
acgggcaaacctgcggtcgccgccaacaccagcgctggaaaagccgaggagggcaccgcc
gaggactcagataaatccaaggacaaatctcaggcggctcagaaagctgccagcaaaaac
agcaccacggccaataaagtgaacagcagcaacggaagcagcacgccgaacagcactaaa
ggaagcaaagagaaagaagataaagagaagaccacaaaggagaaaaaggagaagaaagac
aagaacccagcaagcactccagaggccaaagcaggagggaaggacaaacagaaggaggag
aagcccactgacagcaaggagaagacccccaaggctgacaaggacaagaggaaggatgac
aagaaggaagagaagagcaagatcgatgggaaatccgccgaaaaagagtggtccaaggaa
cgcgacgtgtccaacgacagcaagactaaggaaggcagcaaagtggagaagagcgctggg
acgggaagcatgaagtccctcgtgcccaggtccgaaggagtcgagtctgaacgggcagag
caaaaaagacgaaagcttgacgcacactcgtcaccgtcgcactcctctgcagttaaggac
aatctcaacgacttcaaggactccgcttcaaagcaccatcctaaccacagcacagtcctg
cccaagagcaaagagaaggacgaggagaagaaagagtctgacaaatccagggaccgttcc
aatgagagggagaagaaggaagagcggaaggaccggaaacgagtaagtggctccgtccct
gacgcggttaaaggatccgggcacttggactactcaaacagtgaccgcgagatgagtcag
gaagccaagcgccgcaaagatgaaaatggaatgagctcctccaaacacagcaagagcgcc
agcccctccgaatcaccacactccaacgacaaggacagcagcaagcgctccaagtccacc
agcaaggacaagagcgaactggccaaaccggagaagacctctggaggcaaaaaggaatcc
aggcatgacaaagagaaatccgaaaagaagagagacagcactggcgctaaagaagagaag
aaacaccataaatcatcagaaaagcacagataa
DBGET
integrated database retrieval system
