KEGG   Carassius gibelio (silver crucian carp): 128026940
Entry
128026940         CDS       T08819                                 
Name
(RefSeq) uncharacterized protein LOC128026940
  KO
K10840  centrin-2
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    128026940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    128026940
   03036 Chromosome and associated proteins [BR:cgib03036]
    128026940
   03400 DNA repair and recombination proteins [BR:cgib03400]
    128026940
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     128026940
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    128026940
   Centrosome duplication proteins
    Centriole replication proteins
     128026940
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      128026940
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF_EFCAB10_C EH EF-hand_14 DUF7645 Dockerin_1 MTIP_N SUB1_ProdP9 SRI SurA_N_3 Nmad4 DUF5580_M HerA_C
Other DBs
NCBI-GeneID: 128026940
NCBI-ProteinID: XP_052470190
LinkDB
Position
A14:complement(24620646..24622978)
AA seq 172 aa
MATSPKKPSLGAVAPRKKASPKAELTEEQKQEIREAFELFDTDGSGYIEVKELKVAMRAL
GFEPKKEEIKKMIGEVDKDATGKISFGDFLTVMTHKMADKDSKEEILKAFRLFDDDETGK
ISFRNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNQQEFLRIMKKTSLY
NT seq 519 nt   +upstreamnt  +downstreamnt
atggccaccagtcccaaaaaaccctctctgggggcagtggcccctcgtaaaaaagccagt
ccaaaggctgaactgacagaagagcaaaagcaggagatccgagaggcgtttgagctcttc
gacactgatggttctggttatattgaggtgaaggagttaaaggtggcaatgagagctctg
gggttcgagcctaaaaaggaggaaatcaagaagatgattggagaggttgataaggatgct
actggaaagatctctttcggtgattttctgacagtgatgactcataaaatggctgacaag
gactccaaggaagaaattcttaaagctttccggctgtttgacgatgacgagactggaaaa
atatctttccgcaatctaaagcgagtggccaaagaactcggagaaaacctgaccgacgag
gagctgcaggaaatgattgatgaagcagaccgagatggtgatggagaagttaaccagcag
gaattccttcgcatcatgaagaaaacgagtttgtactga

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