Carassius gibelio (silver crucian carp): 128027192
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Entry
128027192 CDS
T08819
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4-like isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128027192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
128027192
Transporters [BR:
cgib02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128027192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
128027192
NCBI-ProteinID:
XP_052470495
LinkDB
All DBs
Position
A2:complement(13864557..13908280)
Genome browser
AA seq
2328 aa
AA seq
DB search
MNTSSQIRLLLWKNWTLRKRQKIRFVVEILWPVFLFIGLVWLRRANPLYRQHECHFPSKA
MPSAGILPWFQGIFCNANNPCFRHQTRGEFPGVVSNYHNSILARFYQDSQELLFNDTEFH
QLSRLWHEATIMNNFMETLRTSPTLVAGKGLKVEHILKDDEGLTSFLLRDAGLSEAVVYD
LTNAQVRVEQFAYGVPDLTLKEIACSQALLERFLIFPSHGGLYRVHNAMCALSQQRLQMI
EDVLYANIDFFKLLRLLPMVLDNYTTGIDLQFWGRVLSALSDKLQELAERPSSQDLMRVI
YSIFQPGGPSSFSQLMSTVSDLFCGYAEGEITRVFSFNWYEDNNYKAFLGINNSRGHDSY
TYDKTATPFCNALMQNLESNPITKIMWNSVKPLVMGKILYTPDSPAVRKILKSANTTFEE
LERLQKMGKVWEEVGPQLWEFFQNSVQMNMIRDTLRNPTVMDFLDRRLKETQFSTKDILN
FLHSGPEQNRYINMTNFDWRNVFRLADDVIRMFNHYSECISLDKFVGHMDENLMTHQALH
LLGENKFWAGLVFMDMYPWSTELPRHVKFKIRMDIDAVERTNKIKDRYWDPGPRADPLED
HRYIWGGFAYLQDMIEHGILKLHTGHDWPLGVYLQQMPYPCYVDDMFMLTLNRCFPIFMV
LAWIYSVSMMVKSIVLEKEMRLKDMLKAMGVSNRVIWYTWFIDSFLMMAASTALLTVIIM
VGKVLNYSDPIILFLFLLTFTMATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHVFCF
AWQDRITKEMKLAVSFLSPVAFGFGTEYLSRYEEQGLGLQWDNINTSPLEGDEYSFFTSI
HMMLLDAAIYAFLAWYLDNVFPGQYGIGRPFYFPLQPSYWVKPTPQPSQNPAPGPEKPVV
NNVEKQDDVEYGGLSPDQRECNGSSSSKQCKHREKRERMEKEREREEQLKVQEEIQQEEI
QPVHDGNPFFEPEPEGLLMGVSVQDLVKVYSKSSKPAVDRFNMNFYESQITSFLGHNGAG
KTTTLSILTGLFPPTSGTAYIYGKDIRTEMDAIRQSLGMCPQYNILFNHLTVEEHILFYS
LLKGRDRQEAEQEVENMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSKVVILDEP
TSGVDPYSRRSIWDLLLKYRTGRTVILSTHHMDEADLLSDRVAIISKGKLHCSGSPLFLK
NCFGVGFYLTLVRRMKDQRKKENECDCASQCSCTCSTCTRYKEESQTFQPERVLDGNVES
ITALIHHHVPEAKLIEMIGQEMTYLLPNKGFKYRAYASLFRELEETLGDMGLSSFGISDT
SLEEIFLKVTADGDAANSSVTPEQWMLQQRKNGNGFLRENEAASNVEDANGVGSPMESDN
SAGRASMQVKGFNLVLKQFHALIVKRFHHATRSHKDFLAQIVLPASFVLIALVFTMIVPP
FGEYPSLTLTPWMYGQQFTFISNEQPSHPKMRHFIQTLLKGPGMGTRCMANQSLESLFTC
LNTTSDWEVPPVSPEVENILSSPEWNIRNPSPSCECSTDTKLTMLPVCPDGAGGLPPRQR
KELTGDILLDMTDKNISDYLVKTYPKLIKTSLKSKYWVNEQRYGGLSVGGQLPILDVDPK
EIRAILTQLGQMMNITGGPYSKSAMNELGTFLHYMESEYNVKVWYNNKGWHAMVSFMNIA
NNAILRAFLPPHANPAEYGITAVNHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIP
ASFVLYLIQERVTKAKHLQFVSGVSPLVYWVANFFWDMINYSASTAMVVGIFVAFDKKCY
TSPTNLPALVALLCLYGWSVTPMMYPMSYIFNVPSTAYVSLSCINLFIGINSSAITFILE
LFENNRSLLMFNEVLKKVLLVFPHFCLGRGLIDMAMNQAVTDVYARFGEEFSMDPFRWNF
VGKNLFCMAVEGFVYFIFNLLIQYNFFLDHWASDYEKSPVKDEDDDVAQERERIYKGGNK
NDILLIRDLSKTYRRRKQPAVDRICVGVPAGECFGLLGVNGAGKTTTFKMLTGDTDVTSG
EAAVAGYSVLTDILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGIPESEISRVAEWG
IQKLGLSEYAGNCAGTYSGGNKRKLSTAIAMIGCPPLVLLDEPTTGMDPHSRRFLWTAIL
SIIRDGRAVVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGGGYVVTMKIKAE
KAGIPPDLVPAESFMESSFPGCIQREKHYNTLQYEIVASSLARVFQLVLTNKERLNIEDY
SVSQTTLDQVFVSFAKQQSGDDDTQLRASALRREKKISPLQRDVAKNN
NT seq
6987 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccagcagccagatccgtctgctgctctggaagaactggacactccgcaagaga
caaaagattcgcttcgtggttgagattctgtggcctgtgtttttattcattggacttgtt
tggctgcgaagagccaatcccctgtatcgccaacatgaatgtcattttcccagcaaggct
atgccctcagcgggaatcctgccttggtttcaaggcattttctgcaatgctaataaccca
tgttttcgccatcaaactcgaggagagttccctggggtcgtctccaactaccacaactcc
atactggcacggttttaccaggactcacaggagctgctgttcaacgacactgagttccat
cagctcagccgtctgtggcatgaagccaccatcatgaacaacttcatggagacgctacgc
accagtcccacgctggtggcaggtaaaggactaaaagtagagcatattctgaaggatgac
gagggtctaacgtcattcctgctgcgggacgctgggctttcagaggcggtggtgtatgat
cttacaaatgcacaagtgcgggtggagcaatttgcatatggagtcccggatctgactctg
aaggagatcgcctgcagtcaggctcttctggagcgattcctcatcttccccagccatgga
gggctgtacagggtccacaatgccatgtgtgccctttcccagcaaagactgcagatgatt
gaggacgtgctgtatgccaacatagacttcttcaagctcttacgactgttgcccatggtg
ctggataactacacgaccgggatagacttgcagttctggggtcgagtgctttctgcattg
tctgacaagcttcaggagcttgcggagaggcccagctcccaggacttgatgcgggtcatc
tactccatcttccagcccgggggtccctcgtccttcagtcagctgatgtccactgtgtcg
gatctgttctgtggatacgctgagggtgagatcacccgggtcttctcttttaattggtat
gaggacaacaactacaaggctttcctaggcatcaacaactccagaggacacgacagctac
acctatgacaagaccgcaactccgttctgtaatgcattgatgcaaaacctggagtcgaac
cctattacaaaaataatgtggaattcagtgaagcctctggtgatggggaagatcctgtac
accccagactctccggctgtcagaaaaatattaaagagtgccaacactacgtttgaggag
ctagagaggttgcagaaaatggggaaggtctgggaagaggtgggaccacagctttgggag
ttctttcagaacagtgtccaaatgaacatgatacgggacacacttagaaaccccacagtg
atggactttttggacaggcgtcttaaagaaacacagttctccaccaaagacatccttaat
ttcctgcacagtggcccagagcagaacagatatataaatatgacaaactttgactggaga
aacgtcttcagactggctgatgatgttatccggatgttcaaccattacagtgagtgtata
agtctggataagtttgtgggtcacatggatgagaatctgatgacccatcaagctctgcac
ctgctgggggagaataagttctgggcaggtctggtcttcatggacatgtacccctggagc
acagaattgccccgccatgtcaagttcaagatccgaatggacattgatgcagtggaacgt
accaacaaaatcaaagaccggtactgggaccctggcccgagggcagaccctctggaggac
catcgctacatttggggaggttttgcttacctgcaggacatgattgaacacggaatcctc
aagttacacacaggtcatgactggcctctaggtgtttacctgcagcagatgccctacccc
tgctacgtggatgacatgttcatgctgaccctaaaccgctgtttccccatcttcatggtg
ctggcctggatctactccgtgtccatgatggtgaagagcatcgtgctggagaaggagatg
aggctgaaggacatgctgaaggccatgggcgtctcgaatagagtcatctggtacacctgg
ttcattgacagcttccttatgatggctgctagcactgctctgctgacggtcataatcatg
gttggcaaagtgctgaattacagtgatccaatcatcctgttcctgtttctcctcacattc
accatggccactataatgcagtgtttcttgatgagtgtgttcttcaataaggccaacttg
gctgcggcttgtagtggcatcatctacttcaccctctacctccctcacgtcttctgtttc
gcctggcaggaccgcattaccaaagaaatgaagttagctgtgagctttctgtctccagtg
gcctttggttttgggaccgagtacctgtcccgctatgaggagcaaggcctggggctgcag
tgggacaatattaatacaagtcctctagagggtgatgagtactccttcttcacttctatc
cacatgatgctactggatgcagctatctatgcttttttggcgtggtatcttgacaacgtc
tttccaggccagtatggcatcggtcggcccttttatttccctctgcagccctcatactgg
gtgaagccgacacctcaaccctcacagaatccagctccaggccctgaaaagccggtggtt
aataacgtggagaagcaggatgatgtggagtatggtggcctttcaccggaccaaagggaa
tgcaatggttccagcagcagcaaacaatgcaagcacagggagaaacgagagaggatggag
aaagagagagagcgagaggaacagctaaaagtgcaggaagagattcagcaggaggagata
cagccagtgcatgatgggaatccgttctttgaaccggagccggagggtctgctaatggga
gtgtcagtgcaggacttggtgaaagtttattctaagtcctcaaaacctgcggtggaccgt
ttcaacatgaacttctatgagagccagatcacttctttcctgggtcacaatggggcaggg
aagaccaccaccttgtcaatattgaccgggttgtttccgcccacctctggaacggcttac
atatatgggaaggacattcgtacagaaatggatgccatacgacaatcattgggcatgtgc
cctcagtacaacatcctcttcaaccacctgacagtagaggagcatattctcttctactct
ctgctgaagggacgtgaccgccaggaggccgagcaggaggttgagaacatgctggaagac
ctgggactgccccacaaacgagatgaggaagcacagaacctctctgggggtatgcagagg
aagttgtctgtggctatggcttttgtgggtggttctaaggtggtgatactggatgagccg
acatcaggagtggatccatattccagacgctcgatctgggacctgctcctcaagtaccgc
acaggacgcacggtaatactgtccactcatcacatggacgaggcagacctgttgagtgac
agagtggccatcatctctaaagggaaactacactgcagtggctctcctctcttcctgaag
aactgctttggagtgggtttctacctcacactggtgcgtcgcatgaaggaccagcgcaaa
aaagagaatgagtgtgactgtgcgtctcagtgttcctgcacctgctccacctgcaccaga
tataaagaggagagtcagacgtttcagcctgagagagtactagacgggaacgttgagagc
atcactgctttgattcatcaccatgtacctgaggcaaaactgattgaaatgatcggtcag
gagatgacgtatctgctgccaaataaaggttttaaatatcgcgcatacgccagcctgttc
cgcgaactggaggaaacgttgggtgacatgggcctcagtagctttggcatatctgacacg
tcactagaggagatctttctgaaggttacagcagatggagacgcagctaacagctctgtt
acaccagagcaatggatgctacaacagaggaaaaatggcaatggtttcttgagagaaaat
gaggctgcaagtaatgttgaagatgctaatggtgttgggagcccaatggagtctgacaac
agtgctggaagagcctccatgcaggttaaaggctttaatctggtactcaaacagttccac
gctcttattgttaagagatttcaccatgccacacgcagccataaagattttcttgcacag
attgtgttgccagccagttttgtcctcattgctttggtcttcactatgattgtcccacca
tttggagagtatcccagtctgaccctcactccgtggatgtatggacagcagtttaccttc
atcagtaatgagcagccatcacatccaaagatgaggcacttcatacagacgttgctgaag
gggcctggcatgggaactcgctgtatggcaaatcaatctttggagagcctctttacctgc
ctaaacaccacttcagattgggaagttcctccagtttctcccgaggtggaaaacatcttg
tcgagtccagagtggaacataagaaacccctccccttcctgcgagtgcagcactgataca
aagctcaccatgctgcccgtctgtccggacggagctggaggactgccgccacgccagaga
aaagagctaacaggggacattttgctcgacatgacagacaaaaacatctctgactactta
gtgaagacttaccccaaactcatcaagaccagcttgaagagcaaatattgggtgaatgaa
caaaggtatggtggactctctgttggtggacaactgccgattcttgatgttgaccctaag
gagattcgggccattcttacccagcttggacagatgatgaatattacagggggcccctat
tcaaagtcagctatgaatgaattaggaactttcttgcattacatggagagtgagtacaat
gttaaggtgtggtataacaacaaaggctggcacgccatggtctccttcatgaacattgca
aacaatgccattctccgtgctttcctgccgcctcatgccaatccggcagaatacggcatt
actgccgtcaaccacccgctcaacctcaccaaagagcagctgtcagaggtcactgttctc
accacatcagtggatgcagtggtggccatctgcgtcatctttgccatgtccttcatccct
gccagcttcgtcctctacctcattcaggagcgtgtcaccaaggccaaacatctgcagttt
gttagtggagtcagccctctggtttactgggttgctaactttttctgggacatgataaac
tactctgccagcactgcaatggttgtgggaattttcgtggcttttgataagaaatgctac
acatcaccgaccaatctgccggcgctggtcgctttgctctgcctctatgggtggtcagtg
acacccatgatgtaccccatgtcctacatcttcaatgtccccagcacggcgtatgtgtcc
ctctcctgcatcaaccttttcattggtatcaacagcagtgccatcaccttcatcttagag
ctctttgagaacaacaggtctctgctaatgtttaatgaggtgttgaagaaggtgttactg
gtcttccctcacttctgtctcggccgaggtctcattgatatggccatgaaccaggctgtg
actgacgtctatgccagatttggggaggagttttccatggatccattcagatggaacttt
gtggggaagaatcttttctgtatggctgtggagggctttgtctatttcatctttaatctg
ctcatccagtacaacttttttcttgatcactgggcctcagactatgagaagagtccagtt
aaagatgaagatgatgatgtagctcaggagagagagcgcatttacaaaggaggaaacaag
aatgacatccttctaatccgagacttgtcaaaaacatacaggcgcagaaaacaaccggca
gttgacagaatctgcgtaggagttccagcaggcgagtgctttgggcttcttggtgtaaac
ggtgcaggtaaaaccacaacctttaaaatgctgaccggagacacagatgtgacatcaggg
gaggcggcagtagctggatacagtgttctcaccgatatcctggatgtgcaccagaatatg
ggctactgtcctcagtttgatgccatagatgagcttctgactgggagggagcacctgtac
ctgtacgcccgtctccgtggcatccctgaatctgagattagcagagtggcggagtggggc
attcagaagctgggtctgtctgaatatgcaggaaactgtgctgggacctacagcgggggc
aacaagaggaaactgtctactgctattgctatgattggctgtcctcctctagtgctcctg
gatgagcccaccacaggaatggacccacactcccgtcgcttcctgtggaccgccattctg
agtatcatccgtgatgggagggcagtcgttttgacatctcacagtatggaagagtgtgaa
gctctttgtactcgcttggccatcatggtcaatgggacgtttaagtgtctgggcacaatc
cagcatctaaaatataagtttggaggtggctatgttgtcaccatgaagatcaaagctgaa
aaagcaggcatacctcctgatctggtcccggccgagtccttcatggaaagcagcttccca
ggatgtatacaacgagagaaacactacaacactttacaatatgaaattgtcgcctcctca
ctggcacgagtcttccagctggtgttgaccaacaaagagagactgaacattgaggactat
tcggtgtctcagaccacgttagaccaggtgtttgtgagttttgccaagcagcagtcagga
gacgatgatactcagctcagagcatcagcgctgagacgagagaaaaagatctcaccgcta
caaagagatgtggcgaaaaacaattaa
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integrated database retrieval system