Carassius gibelio (silver crucian carp): 128027246
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Entry
128027246 CDS
T08819
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04518
Integrin signaling
cgib04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
128027246
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128027246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128027246
Membrane trafficking [BR:
cgib04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128027246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
CH
SH3_1
RhoGEF67_u1
SH3_9
PH
SOS1_NGEF_PH
CENP-Q
Mis12
ENTR1
COG6_N
ZapB
CAMSAP_CH
SH3_3
Motif
Other DBs
NCBI-GeneID:
128027246
NCBI-ProteinID:
XP_052470597
LinkDB
All DBs
Position
A14:2860439..2884030
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AA seq
779 aa
AA seq
DB search
MNPEEQTVTWLITLGVLNSPKKNIADPEEFLKTSLRDGVVLCKLMERVHPGAIVKYSTEP
RCEADCLANIREFLKGCQSLKVEGFDAESLYTGENFNKVLSTLSAINIATQDRSPNRSCP
QSSGSAPSLSAPSQAAPTLKSSRSLRRQSKALDMSENGGGGHLVVKARFNFKQNNEDELS
FSKGELIQVTRQEDGGWWEGTLNGKTGWFPSNYVREVKPCEKPISPKAIKGLDVPQLTKN
YYNVVVQDILEHEREFVKELQTLLGCYLRPLQTSDKLSSADCSSLNGNLEDILSFQQGLC
LALEECSKMPEGLQRIGACYLNLMCQIRTLYLSYCSSHPSAVCVLTDHSEELDKFMESQG
ASAPGILTLTTSLSRPFMRLDKYPTLLQELERHVEEAHPDYSDVLKATVAFKNLVTQCQD
LRKRKNLELQILSEPVRGWEGDSMKSLGQVVYTSQVHIQSGLNEEKEERYFMLFPNVVVM
LSVSPRMSGFIYQGRLPLTGTTVTKLPEDAETGHYAFEITGGAIDRTTVFCGSAQEQLEW
LEHLHAYTKEGSPVGTIIKSVDGKPTTMTSTSSHHLHSFGTAVANRGPLEPPKITKPWSL
SCLRPAPPLKPSAALGYKERMSYILKDTSKSPRTRPKFLPKRKTERKASDDDALLRKSTA
ALEEDAQILKVIEAYCTGASLHQSTTAVRKECIPQVFLLPEEEKIIVEEVKSNGQTIIEE
KSLVDAVYALKDEVHELKKENKWMKQCLEEEQKSRKELERVVRKLAKQKNDCSWDEGGH
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgaagagcagactgttacgtggctaataacattaggcgtgcttaattcaccc
aaaaagaatatcgctgatccggaggaatttctgaaaacctctctcagagatggggtcgtc
ctgtgtaagcttatggaacgagtgcatcctggagccatcgtaaagtactcaactgaacct
agatgcgaagcggactgccttgcaaacattcgagagtttctaaaaggatgccagtctcta
aaggttgagggctttgatgcagaaagcttatatactggggagaacttcaacaaggttctg
tcaacactctcagcaataaacatcgccactcaagatcgttcccctaatagatcatgtcct
cagtccagtggctctgctcctagcctgtcagccccttcacaagctgctcccacactcaag
tccagcaggtctttacggaggcagtcaaaagctttggatatgtcggagaatggagggggc
gggcatctggttgtcaaggcacgttttaatttcaagcagaacaatgaggacgagctgtct
ttcagcaagggtgagctgatccaggtcacacgccaggaggacggtggatggtgggaggga
acccttaacggcaaaaccggctggttccctagcaattacgtccgagaggtcaagccatgt
gagaagccgatttctccgaaagcaataaaaggacttgacgttcctcagctgactaaaaat
tattataatgtggtggtgcaagacatcttggagcatgagagagagtttgttaaggaactg
cagacgctcctgggctgctacctgcgccctctacagaccagcgacaagctgtctagtgcg
gactgctccagtctgaacgggaatttagaggacatcctctcgttccaacagggactgtgt
cttgccttagaggagtgctccaagatgccagagggcctgcagcggattggtgcctgttat
ctgaacctgatgtgtcagatcagaacactgtacttgtcctactgctccagccatccttct
gcagtctgtgtgctgactgatcacagtgaggagctggacaagttcatggagagtcaggga
gccagtgctcctggtatcctgaccctcaccaccagcctgagcagacccttcatgaggctg
gataagtaccccaccctcctgcaggagcttgagcgacatgtggaggaggcgcatccagac
tacagtgacgttctcaaagcaacagttgcttttaaaaatcttgtgactcagtgtcaagat
ttgcgtaaaagaaagaacttggagttacagatcttgtcggagccggtgcggggctgggag
ggcgacagcatgaagtcactgggtcaggtggtctacacgtcgcaggtccacatccagagc
ggtttaaatgaggaaaaggaagagcgatacttcatgctgtttcccaatgtggtagtcatg
ctgtccgtcagcccaagaatgagtggttttatttaccaaggacgtctgccactgactgga
accactgtaaccaaactgccagaggatgcagagacaggccattatgcttttgagatcaca
gggggggcgatagatcgcaccactgtgttctgcggtagtgcacaggagcagctggagtgg
ttagaacatcttcatgcttacaccaaggaagggagtcctgtcggaacaataataaagagt
gttgatggtaaacctacaaccatgactagcacgtcgtcccaccacttgcacagtttcggt
actgctgtggctaaccgaggacccctcgaaccccccaagatcaccaagccatggtcctta
agctgtctgagacctgcgccaccccttaagccatctgctgccctcggttataaagagagg
atgtcttatatcctgaaggacactagtaaaagccccagaaccagacccaagttccttcca
aagagaaaaacggagagaaaagcatcagatgatgatgccctgcttagaaaaagcacagcg
gctctagaggaggatgcccagatactcaaagtgattgaggcctactgcactggagccagt
ctccaccaatccaccacagctgttcgcaaggagtgcatcccccaggtcttccttcttcca
gaagaagagaagattattgttgaggaggtcaagagcaatggccagacgatcattgaggaa
aaaagtcttgttgatgccgtttatgctctaaaagatgaagtccatgaattaaaaaaggag
aataaatggatgaagcagtgtctggaagaggaacagaagtcccggaaggagttagagcgt
gtagtcagaaagttggccaagcagaagaatgactgttcctgggatgaaggaggtcactaa
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