Carassius gibelio (silver crucian carp): 128027249
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Entry
128027249 CDS
T08819
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128027249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128027249
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
hnRNP proteins
128027249
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
128027249
NCBI-ProteinID:
XP_052470601
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All DBs
Position
A14:2855023..2860198
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AA seq
371 aa
AA seq
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MAEADRPGKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPG
DAKDAAREMNGKPFDGKPIKVEQATKPQFESLGRRGPPPSRSRGSSRGLRGSRGASSREP
FFKGMSSRGPPPLKRGPPERNGGPPSKRSTFSGPMGRLSRERDPYGPPRRDSLMSRRDDG
PPPRYDHYSSKDSYSSRDYMSSRDSRDYAPSPRDYPYREYSGHSSSRDDYGSGSRGYGDR
DGYGGGREPRGYMDRPSTGSYRDPYDGYGNSRSAPPSRGPPPSYSGSSGSSRYDDYGSSS
RDGYGSRDSYPSSRSDPYSTSRGDRLGRQERGPPPPLDRGYHREYSSSSRGAPRGGGRGG
RPDRGMARNRY
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggcagaccgaccagggaagctcttcatcggtggcctgaacactgaaactagt
gagaaggtccttgaagcgtatttcagcaagtttggcagaatatcagaagttctgttgatg
aaggatcgtgaaacaaacaaatctagaggctttgcgtttgtaacttacgaaaatcctggt
gacgcaaaagatgcggcaagggaaatgaacggaaagccctttgatggaaagcctattaaa
gtggaacaggccacgaaacctcagtttgagtctttgggacgccgtggtccacctccatca
cgaagtcgtggctcttctagaggtctgcgagggtctaggggagcatcaagcagagaaccc
ttttttaaaggcatgtcatccagagggcctccgccactgaagagaggcccaccggagcgt
aatggaggacccccatccaaaagatccacattctctgggccaatgggaagactgtccaga
gaacgggacccatacggcccccctcgcagagattctctgatgtcacggcgtgatgatggt
cctccacctcgttatgaccactacagtagcaaagacagttactccagccgtgactacatg
agttcacgggacagtcgagactatgccccatcaccacgtgattacccgtaccgggagtat
tcgggccattccagttctagagatgactatgggtcaggatccagaggttacggtgatcgt
gatggctatggtggaggacgagagcccaggggttacatggatcggcccagtacgggctcc
tatagagatccttacgacggttacggtaactcacgaagcgccccaccctcaaggggtccc
cctccgtcctacagtgggagtagtggaagcagtcgttatgacgactatggcagcagttcc
agagatggatatggcagtcgtgacagttatcccagcagtcggagtgacccgtactccact
agtcgtggtgaccgtctgggtaggcaagagcgagggccaccccctcctctagatcgaggc
tatcatcgtgaatacagcagctcaagccgtggggcgcctcgaggcggtggccgcggtggt
cggccagatagaggaatggcccggaaccgatactga
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