Carassius gibelio (silver crucian carp): 128027283
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Entry
128027283 CDS
T08819
Name
(RefSeq) CCR4-NOT transcription complex subunit 7 isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128027283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128027283
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128027283
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128027283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
128027283
NCBI-ProteinID:
XP_052470685
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All DBs
Position
A14:complement(3523591..3530688)
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AA seq
286 aa
AA seq
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MPAATVDHSQRICEVWASNLDEEMKRIRQVARKFNYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTSSG
IQFKKHEDEGIETLYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPEEEVD
FFEILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSSYVQNGTGNAYEEEANKQQS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagccactgtggatcatagtcaaagaatatgtgaggtttgggccagcaacctg
gatgaggagatgaagaggatccgacaggtggcccgaaaattcaactacattgcaatggac
acagagttcccaggtgtagttgcaagaccaatcggtgaatttagaagcaatgctgattac
cagtaccagctgttgcggtgtaatgttgacttgttaaagatcatccagcttggccttaca
tttatgaacgaacagggggaataccctccagggacatcaacatggcagttcaacttcaaa
tttaacctcacggaagacatgtatgcacaggattccatcgagttgctcacctcgtcaggt
atccagttcaagaagcatgaggacgagggtattgagacactgtactttgctgagctgctt
atgacctcaggtgtcgtgctttgtgagggggtcaagtggctctcatttcatagtggctat
gactttgggtacttgattaaaattttgtccaattcgaaattgccagaggaagaggttgac
ttcttcgagattcttcgtttattttttcccgtcatttacgatgtgaagtacctcatgaag
agctgtaagaatttgaagggtggtctgcaggaggtggcagagcagcttgagctggagaga
attggacctcagcatcaggcaggctctgattcactcctcacaggaatggcttttttcaag
atgagagagatgttttttgaggatcacattgatgatgcaaagtattgtggtcacttgtat
ggactgggttcaggctcatcctatgtgcagaacggcactggaaatgcttacgaagaggag
gcaaacaagcagcagtcatga
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