Carassius gibelio (silver crucian carp): 128027302
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Entry
128027302 CDS
T08819
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00061
Fatty acid biosynthesis
cgib00071
Fatty acid degradation
cgib01100
Metabolic pathways
cgib01212
Fatty acid metabolism
cgib03320
PPAR signaling pathway
cgib04146
Peroxisome
cgib04216
Ferroptosis
cgib04920
Adipocytokine signaling pathway
Module
cgib_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
128027302
00071 Fatty acid degradation
128027302
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128027302
09143 Cell growth and death
04216 Ferroptosis
128027302
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128027302
03320 PPAR signaling pathway
128027302
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgib01004
]
128027302
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128027302
Enzymes [BR:
cgib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128027302
Lipid biosynthesis proteins [BR:
cgib01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128027302
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of breast milk
128027302
Exosomal proteins of breast cancer cells
128027302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
CelTOS
PDDEXK_6
Motif
Other DBs
NCBI-GeneID:
128027302
NCBI-ProteinID:
XP_052470725
LinkDB
All DBs
Position
A14:complement(4372013..4384353)
Genome browser
AA seq
706 aa
AA seq
DB search
MDPSTLLLFPVHAVVWLYSLLSFLPWYFLTGAQEKKSLAKRLKSRSTTGQAEGPYRSVDR
FDSLVTEDFPGKDTLDKLFDYAVERFGKADCLGTREVLSEENETQPSGKVFKKLILGDYK
WISYEEMDVQISQFGSGLAALGQQPKSTIAIFCETRAEWMITAQTCFRHNFPLVTFYATL
GEEAVAFGLNECGVTHLVTSVELLETKLKDVLSQIPNLRHIIYVDRKSISTAGYPQGVHI
HSMHSVQELGAKPENLRRPVVKPVPSDLAVIMYTSGSTGRPKGVMIVHSNLIGGMAGQCE
RIPGLGSKDTYIAYLPLAHVLEMTAEISCVTYGCRIGYSSPQTLSDQSTKIKKGSKGDCT
VLKPSLMAAVPEIMDRINKNVMSKVQEMNCVQRTLFKLAYDYKLEQIKRGYDAPLCNILF
KKVRSLLGGNVRMMLSGGAPLSPATQRFMNICFCCPVGQGYGLTETCGAGTITEVADYST
GRVGAPLICCEIKLKDWAEGGYTKHDKPHPRGEILIGGPNVTMGYYRSEGCINEDFFVDE
NGQQWFCTGDIGEMHPDGCLQIVDRKKDLVKLQAGDYVSLGKVESALKNCSLVDNICAYA
NSDQNYVISFIVPNQKKLTALARQKGIEGTWEEICNHPVMEREVLREIKEVAISIKLQRF
EIPVMVHLSPEPWTPETGLVTDAFKLKRKELKNHYLNDIERMYGHK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagtacacttctcttgttcccagtacatgcagtagtatggctctactcactc
ttgagctttctcccatggtacttcctgactggagcccaggaaaagaaatccttggcaaag
aggctcaaatccaggtcaaccacgggtcaggctgaaggaccgtatcgatccgtggatcgc
ttcgactccctggtcacggaggactttcctgggaaagacacccttgataagctgtttgac
tatgcggtggaacgcttcggtaaagcagactgcctgggaaccagagaagttctgagcgaa
gaaaatgagactcagccgagtgggaaggtcttcaaaaagttgattcttggtgattataaa
tggatatcctatgaggagatggacgttcagatcagtcagtttgggagcggactggcagca
ctaggccaacagccaaaaagcaccatcgctattttctgtgagacaagggcagagtggatg
atcacggctcagacctgctttagacacaatttcccattggtcaccttttatgcaactctg
ggagaagaggcagtggctttcggattgaatgagtgtggagttacacacctggtcaccagt
gtcgaactgctggaaactaaactgaaggatgttctttctcaaatccccaatctgaggcac
atcatctatgtggacaggaagagcatcagcacagcggggtatccacagggcgtccacatc
cacagcatgcactctgtgcaagagctgggagccaagccagaaaacttgagaagacccgta
gtgaagcccgtcccatcagatctcgctgttatcatgtacaccagcggctccaccggtaga
cctaaaggggtgatgattgttcacagtaacctgatcgggggcatggcaggccagtgcgag
aggatacctggattgggctcaaaggacacatatattgcctatctgcctcttgctcatgtg
ctggaaatgacagctgagatctcctgtgtgacgtacggctgcaggatcggctattcctca
ccacaaacactgtctgatcagtccaccaaaattaagaaaggaagtaaaggtgactgcacc
gtgctcaaaccttctctaatggcggccgtacccgaaataatggaccggatcaataagaac
gtcatgagtaaagtgcaggagatgaactgcgtgcagagaaccctgttcaaactggcctac
gactacaaactcgagcagatcaagaggggttatgatgcacctctgtgcaacattttgttt
aagaaagtcagatctctgctgggtggaaacgtgcggatgatgctgtccggaggagcccct
ctgtctcctgccactcagcgcttcatgaacatctgcttctgctgtcctgttggtcaggga
tacggtcttactgagacctgcggagcgggaactataaccgaggttgctgactatagcaca
ggacgagtaggagctcctctgatctgctgtgagatcaaactcaaagactgggcagaagga
ggctatacgaagcatgacaagccccatccgcgtggtgagatcctcatcggaggtcctaac
gtgaccatgggctactacaggagtgaaggctgtatcaacgaggacttctttgtggatgag
aacggccagcagtggttctgcactggtgatatcggagaaatgcaccctgacggctgtctt
cagattgttgatcgcaagaaggaccttgtgaaactccaagctggagactacgtctcttta
ggaaaagttgagtccgctctgaagaactgctctctcgttgacaacatctgtgcttacgca
aacagtgaccagaactacgttatcagcttcattgttcctaatcagaagaagctgaccgct
cttgccaggcagaagggcattgaaggcacgtgggaagagatctgcaaccacccggttatg
gaaagggaagttctgagagaaattaaagaagttgcaatttcaatcaaactccagcgcttt
gaaataccagttatggtccatctgagtccggagccttggacccctgaaacgggtctggtg
acggacgcattcaaactcaagaggaaggagctcaagaaccactatctcaacgacatcgaa
agaatgtatggccacaagtag
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