Carassius gibelio (silver crucian carp): 128027322
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Entry
128027322 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
cgib04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128027322
04120 Ubiquitin mediated proteolysis
128027322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128027322
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128027322
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128027322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
128027322
NCBI-ProteinID:
XP_052470814
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All DBs
Position
A14:5465190..5471629
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AA seq
619 aa
AA seq
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MVRAALVTATSLVLTGAVVAHAYFLKVQFYPTVVYLTKSSPSMAVIYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSENPWDNKAVYMLYTELFTGFIKVILYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAPAQAPVPAAPANAP
VPPPVNVAPGMMPQFPPGLFPFWGPLPGAPPPPAAPGAQAATDAPQTSAAATPAQGAESG
ASSSTQPNADSASAAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMSE
AELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSETNAGETSTS
ANVESSSSTGNTETPSQENEAQSDGSVNGATGFSPPDSTTGVDKDRKEGDEDEDDSEPNA
AELRRRRLRKLETTNTPDH
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctctggtgacagccaccagtttggtgctgactggtgcagtggtggct
catgcgtacttcctcaaggtccagttctaccccactgtggtgtacctcactaagagcagt
cctagcatggcagttatatacattcaggctttcgttttggttttccttttggggaaatta
atgcggaaggtgtttttcgggcaactgagagctgctgagatggagcacctgattgaacgc
tcctggtacgccgtgaccgagacctgtttggcttttacagtcttcagggatgatttctct
cctcgctttgtggccctcttcactctgttgcttttcctcaagtgtttccactggctggct
gaagacagggtggactttatggaaaggagtcccaatatctcatgggtcttccacttcaga
gttctctccctgatggtgctgctgggagtgttggactttctgtttgtcaatcatgcgtgt
cacagcatcataaccagaggagcgtcagtgcagctggtttttggatttgagtatgcgatt
ctgatgactatggtcctcaccaccttcatcaagtacaccttgcacacagttgatctgcag
agtgagaatccgtgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaggtgattttgtatatggcgttcatgaccataatgataaaggtgcacaccttc
cctctgtttgccatccgacccatgtatctggcaatgaggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaatatgaatactctctatccagatgccacc
cctgaagacttgcaagccactgataatgtgtgcatcatttgcagagaagagatggtgacc
ggagccaagaaactgccgtgcaaccacatctttcactcaagttgccttcgctcctggttc
cagagacagcagacgtgtccgacgtgtcgtatggatgtcctccgagcgtcccagccgaac
cagactcctgccccagctcccgcacaagcacctgtccctgctgctcctgctaatgccccc
gtgcctccacctgtcaatgttgctccaggaatgatgcctcagtttcctccgggtctgttt
ccattttggggtcccttaccaggcgcgcctcctcctcctgctgctccgggagcacaggca
gctactgatgcaccacagaccagcgccgctgcaacaccggcacagggagcagaatcagga
gccagcagctcgacccagccgaatgcagacagcgcctctgctgcccccggagcaatgcct
ggattccccttctccatgcctccacctttcccatcagctccgtggctcccgatgcctcca
cctccacccttcatgtcatccatgccaccgcctccgtcgactctgtccaccatgtccgag
gccgagctcagggagctggagcaggagggcaggcgaggtttggaagccaggttgcagtgc
cttcacaacatccacacattactggatgccgccatgctcaacattcatcactacctcagc
acggtggccacattaagtcctccaagatcagaaaccaacgctggtgagacgagtacatca
gcgaatgtggagtcctcttcctccacgggcaacaccgaaactcccagtcaggagaacgag
gctcagagcgatggatctgtaaatggagcgacaggcttttctccaccagactcaaccaca
ggtgtggacaaagacaggaaggagggagatgaagacgaggatgacagcgagccaaatgcc
gccgagttgagacgacgtcgtctgcgtaaactggagaccactaatactcctgaccactga
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