Carassius gibelio (silver crucian carp): 128027354
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Entry
128027354 CDS
T08819
Name
(RefSeq) D4, zinc and double PHD fingers family 2, like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128027354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128027354
03036 Chromosome and associated proteins [BR:
cgib03036
]
128027354
Spliceosome [BR:
cgib03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128027354
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128027354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
PHD_4
zf_RING_Vps8
zf-C2H2
Lar_restr_allev
zf-C2H2_4
ESR1_C
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
128027354
NCBI-ProteinID:
XP_052470857
LinkDB
All DBs
Position
A14:6590820..6603419
Genome browser
AA seq
405 aa
AA seq
DB search
MATAVENIVKVLGEQYYKDALEQCHSYNARLCAERSILMPFLDSQTGVAQSNCYIWMEKR
HRSAGTTPGQLYTYPARRWRKKRRAHPPEEPALVFPPIKSAELELGMKKDVLGPLDGSSL
EALLKGEPLDKRVSTEFRPPEEETSLSEVTGTSTASSHSGSTRIRKRVLEPEDYLDDLDD
EDFEEETPKRRGKGKSKGRGVGNGKKKMEAAAAAQEDRDKPYACDICGKRYKNRPGLSYH
YTHSHLADEEGEDREEPEIHTPVPREEHKTPKKGPNGLALPNDYCDFCLGDSNMNQKTGQ
SEELVSCSDCGRSGHPSCLQFTAVMMAAVKTYRWQCIECKCCNVCGTSENDDQLLFCDDC
DRGYHMYCLSPPMADPPEGSWSCHLCLALLKDKASIYQSQNPAME
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgccgtggagaacatcgttaaagttcttggagagcagtactataaagatgct
ttggagcagtgtcacagttataacgcccggctgtgtgccgagaggagcatcctcatgccc
ttcctggactcccaaactggagtcgctcaaagcaactgctatatttggatggagaagaga
cacaggagtgcaggtaccacaccgggacagctgtacacatatcctgctcggcgctggagg
aagaaaagaagagctcacccaccagaagaacctgctctggtgtttcctccaatcaaatct
gcagagctggaactgggaatgaaaaaagatgtgttggggccgttggatgggagcagtctg
gaagccttgctgaaaggagagccgctggataaaagagtgtccaccgagttcagaccgccg
gaggaagaaaccagtctgtctgaggtcactggaaccagcacggccagcagccacagcggc
tccacacgcatcaggaagagagtgcttgagcccgaagactacttggatgatctggacgat
gaagattttgaggaggagactccaaaaagacgaggaaaaggaaagtctaagggtcgagga
gttggaaatggaaaaaagaaaatggaagctgctgcagctgcccaagaagatcgagacaaa
ccgtatgcttgtgacatctgtgggaaacgctataaaaacagaccgggtttgagttaccac
tacactcactctcacctggctgacgaggagggagaagatcgagaggaacctgagattcac
acacctgtaccacgagaggaacacaagacccctaagaaaggaccaaatggcctggcgtta
cccaatgactattgtgacttctgcctgggcgactccaacatgaaccagaaaacaggccag
tcggaggaactggtgtcctgctctgactgtggacgttcaggacatccttcgtgcctgcag
ttcactgccgtgatgatggcagctgtgaagacttaccgctggcaatgcattgagtgcaag
tgctgcaatgtttgtggcacatctgagaacgacgaccagcttctgttctgtgatgactgt
gacagaggataccacatgtactgcctcagccctcccatggcagaccctccagaaggaagc
tggagttgccacctgtgtctggctcttctgaaggacaaggcctccatttatcagagccaa
aaccctgccatggagtga
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