Carassius gibelio (silver crucian carp): 128027364
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Entry
128027364 CDS
T08819
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128027364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128027364
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128027364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
ERM_helical
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
128027364
NCBI-ProteinID:
XP_052470885
LinkDB
All DBs
Position
A2:complement(14631121..14651034)
Genome browser
AA seq
2342 aa
AA seq
DB search
MAALLQQALERTEINKLPKAIQNKLEKVLSEQQTEVDSLKSQHERYKADCEQQYFSLEKK
LAESQEQFLSQSKEYHSIKEENGRLLEELKKLKDVEEEQGTTQASKPPRAKYEIEAENRE
LSRSLEKRSQEVENLSEDLKRLNDKLVETNTIKMELQLKLDELQSSEVSIQFREKRMEQE
KELLQNQNTWLNAELKSKTDELYALSRDKGKEILELKCSLESKKEEVTRLQDQVTTLKKN
NDNMQKSTEELMNKLKEAKDQWASMEEKYRNELNANLKLCNLYKNAAADSEVKNAELNRA
VEELNKLLKEAMEANKGTEKKLSELQSVREKAASDLHEKVRHLEKELENANTRLADFKRR
GVPALTEEELTNLSPTAAAVAKIVKPGMKLMELYNAFVEAQDQLHIEKLESKRVHKVLDE
IVLEVENKAPILKRQREEYENMQKSMTSLCAKLEQAMKEVRRLQKETDEANKRSLGLERD
KQRSERQLADMSEQVRVLLVEVEEARGNQVVREDVSSAVSSSSEVQGSRQLAFRSVQELQ
QQNQNMLAQIRDLEEQRERDQNQAKTARQTELEQNLEKFQTELEQIKEQHNHQKQLADSA
ARQRDMYRILLQTAGVELPPQGPDAGSQATAASRSGPMPTRSTPLRAAAAESVQATQAKA
ALKQLNDAFTTYKKEKAENDKLLNEQIERLHGQVSDLLSQKAKLSSQLEFAFKRYEMLQD
NVNGFRREIEALRERNQKMTATHQRHEQIIHTMTQDLREANEKLVMAELRVENIRKEKDI
LKQVENRLAQEKESILTEQRGQNLLLTNLKSIQLTMERSETDTKQRYNNQIQRLEKDIVQ
LKKKLEQEVEQRHALERHQDTQLLEAKKQLETQTALHQKTKELLRTAEQQVTSMRQQLNN
TENQSTAPKQPVRTLPRAPGVPQQEVDELRACLQQAEEQNSDLKERLKNVNTNLEQYRSL
VLSLEESVNKEKQLGEQARTSTDSQLKTARELNQQLEARLVEAEKEKLELQEEKRKAVES
IEERVKELKRSMTDMQTELQDALQRAVEAVAQEQRATQDSKLQAKLAAEAQNKYERELML
HAADVEALQAAKKQGQQSVQTLKQLEDKAQKAASELRQGRVDWEQKEKRLKEELSKEQKR
AEELQKQNTMLHDQMEELSSKIMASTQQQTAGESSLNISLNEEGKSHEQILDILRFVRRE
KEIAETRREVAEVETLRYKQRMEYLEGELKELQDSLNVEREKLQVATKTLTQQEDIMKRM
ESMSALTETNKMLKNEKNRLEHELQQTQAKIRKLEADIKPLQDSNAELSEKSGMLQAEKR
LLEEDVKRLKTRTQQLLSQQKDSDQEESKRLNSERETHLKRIQQLIEETGKLKNEVARSQ
ASITTAQSQVQNLQDSLGKVTTERDSLKKELEAKNVDIQEKLKTITQVKKIGRRYKTQYE
ELKEQHDKMVAEAASKPAQEHEDRQASVQEIQNLKSSLSQTQNRTSELETQLDSIQKTVQ
EREAEVKSLQEQLAQVQPELSRLRAELQEKSNLEEQLRQQIAEKEEKTKKAFMGAKQKIN
QLNSAKEQLAKENEELKQQREELEVRMSALKSQYEGRLSRQERELRELREQQERHGDQKD
EAQEPGQSKVQEAQRSSDARQITLKPTPAADRGSASTSEPPTANIKPTPVAAAPSKPSPI
AGSKSTPRASIRPMITPGPVTTPTATVMPTTQVETQEALQSTESPVEHVTVFGSTSGSVR
STSPNIQTTQPILGLQQTQATAFVQPTQQQTSPEPATTVMEAVHSSQMERPSTSTAVFGS
VSATAGSSVPKRAREEEQESSTEVTDTTQEDSTHQPITKKLRIIRRIGLEVSSDASGTEE
SNDAMGEAPGESQQPPDASEEAFPVLGEGDEESLSQSVPMDQVSESQPSESQISGQDSIE
EYKHDVIIIETDSGTEEEEEEQGEPGEYEDDDDAEDEDEDGDGGMAEAADESNEGSGSAD
ANDAYEGDEAEGDGAADPGIDNEESQEASDSIQKQADSQSSGEASVSTLESFPAEPVPTT
TTTSCLGLRLPQPPRRPHHTPPPRLNIHPVPELGPPIMQRQSGQSRRPSMGRAPQLTPGI
GSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDMMPQASSSH
SDLSHLATHGGLGMYESPLFLPAHEEESGGRSVPTTPLQVAAPVTVFTESHPSDVSETAS
QSVPMVSTSTGSLSAPGEAVPGDDGDDVFVGEAESEGASSEACLEGQSELESAQPTDDAS
MPSTSQEPTSSSTDPSTSSGQAKPASRLLPQHQLPRRNQIIRRGGGFPRGSRGRGLNRGT
PF
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttcttcagcaagcgctggagagaaccgagataaacaaactgccgaaagcg
attcagaacaaactcgagaaagttctgtcagagcagcaaacggaagtagactcactgaaa
tcccagcacgagcgatataaagcagactgcgaacaacagtacttcagtcttgagaagaag
ctagccgagagtcaggagcagttcttgtcccaaagtaaagagtatcacagtatcaaggag
gagaacggccgcctcttggaggaacttaagaagctaaaagatgtagaggaagagcagggg
accacacaagcgagtaagcctccaagagccaaatatgaaattgaggcagaaaaccgagag
ctctcacggtcgcttgagaagagatctcaagaagtggaaaacctcagcgaggatcttaaa
cgtctcaacgacaaacttgtggagaccaacacaatcaagatggagctccagcttaaactg
gatgaacttcagtcttctgaggtttccattcagtttcgtgagaagcgaatggaacaagaa
aaggagctccttcagaaccagaacacatggctgaatgcagagctgaagagtaagacggat
gagctgtacgcattatccagagacaagggcaaagagatcctggagctcaagtgctcttta
gagagcaagaaggaagaggtgaccagacttcaggaccaagtgaccacgctcaagaaaaac
aatgacaacatgcagaagagtactgaggagctcatgaacaaactcaaagaggctaaagac
cagtgggcctccatggaggaaaagtatcgcaatgagctgaatgctaacctcaaactctgt
aatttgtacaagaacgcagcagcagactctgaagttaagaacgctgaactgaacagagct
gtagaagagctcaacaaactgttgaaggaggcgatggaagccaataaaggcacagagaag
aagctgtcagagctgcagagtgtgagggagaaagcggcgtctgatctacacgagaaggtc
aggcatctggagaaagagctggaaaatgccaacacgcgacttgcagactttaaaaggaga
ggcgttccggctctcacagaagaggagctgacaaacctctccccaactgcagctgcagtg
gccaagattgttaagcccggcatgaagctaatggagctgtataatgccttcgttgaggcg
caagaccagctgcatattgagaagctggagagcaagcgtgtgcacaaggttctggatgag
atcgttctggaggtggagaacaaagctcccatcctgaaacggcagagggaagaatatgaa
aacatgcaaaagtccatgaccagcctatgtgccaaactggagcaggctatgaaggaggtc
cgtcgactccagaaggagacggatgaagccaataagagatctttagggctagagcgagat
aaacagagatcagagagacagttagcagacatgtctgaacaggtgcgtgtgctgctggtg
gaggtggaggaagcacgtggtaatcaggtggtgcgtgaggatgtgagctcggctgtgagc
agcagctctgaggtccagggatcacgccagttggctttccgcagcgtccaagagcttcag
cagcagaaccagaacatgctggcccagatccgagatctggaggagcagagggagcgggac
cagaaccaggcgaagactgccaggcaaaccgagttggaacagaatctagagaagtttcag
acggagctggagcagataaaggagcagcataaccaccagaagcagctggctgattcagcc
gcccggcaacgagacatgtaccgtatcctgttgcagacagctggagtcgagcttccaccg
cagggtccagacgctggatctcaagccaccgctgccagcaggtcaggacccatgcctacc
agatctacacccctcagggctgcagctgcagaatctgtccaggctactcaggccaaagca
gcacttaaacagcttaatgatgcctttacaacatataaaaaagagaaggcagaaaacgac
aagcttctgaacgaacagattgagaggcttcatggtcaagtgtcggacctgctctcacaa
aaggctaaactctcctctcagctggagtttgccttcaaacggtatgagatgcttcaggac
aatgtgaatggctttagacgagagattgaagccctacgtgagaggaatcaaaagatgact
gccactcatcagagacatgaacaaatcattcacacaatgactcaagatctaagggaggcc
aatgagaaactagtcatggctgagttgcgcgttgagaacatccggaaggaaaaagacatt
ctgaagcaggtggagaacagactggcccaggagaaagagtccatcctgaccgagcagcgg
ggccagaacctcctgcttaccaatctcaaatccattcagcttaccatggaacgctctgag
acggataccaagcagcgctacaataaccagattcagcgtctggagaaagatatcgtccag
cttaagaagaagctggaacaggaggtggaacagagacacgcactggaacgccaccaagat
actcagcttctggaggctaagaagcagttggagacacagacagcactacatcagaagact
aaagagctgctaagaactgctgaacagcaggtcacctccatgaggcagcaactgaacaac
accgagaaccagagcacagctcctaagcagcctgtgaggacgttacccagagctcctggt
gttcctcaacaagaggtggatgaactccgtgcatgtctacagcaggccgaagaacagaac
tctgacctgaaggagcgtttgaagaatgtcaacaccaacctagagcagtacagatccttg
gtgctcagcttagaggaatctgtaaacaaagagaagcagttgggtgagcaagcacggacc
tccactgacagccagctgaagaccgcgcgagagttgaaccagcagctggaagcccggctg
gtggaagcagaaaaggaaaagctagagctccaggaggagaagaggaaagctgtggagagc
attgaagaacgggtgaaggaactgaaaaggagcatgacagacatgcagacagagctgcag
gatgccctccagagagctgtggaagcagtggcccaggaacagagagccactcaggacagc
aaactacaggctaaactggctgcagaggctcagaataaatatgagcgagagctcatgctg
catgctgcagatgtggaagccctacaggccgccaagaaacagggacagcagtcagtgcag
accttgaagcagcttgaggacaaggctcagaaagctgcatctgagctgcgtcagggccgt
gtggactgggaacaaaaagaaaagagactgaaggaggaactttctaaagaacagaagaga
gccgaggagctgcagaagcagaacaccatgcttcatgatcagatggaagagctgagcagc
aagataatggcctccacccagcagcagaccgctggagagagcagtctgaacatctctctg
aacgaggagggcaaatctcatgaacagatcctggacattctcaggtttgtacggcgggag
aaggagatagctgagacccggcgagaagtggcggaagtggagaccctgcgatataaacag
cgcatggagtacctggagggagagctaaaggaactgcaggatagcctgaatgtggagagg
gaaaagctacaggtagcaacaaagaccttgacacagcaggaagacataatgaagcggatg
gagagtatgagtgctctgactgagaccaacaagatgctgaagaatgagaagaacagactg
gagcatgaactacaacagactcaagcaaagatccgtaaactggaggcagacatcaagccc
ctgcaggactccaatgctgagctgagtgagaagagtggcatgctacaggctgagaagaga
ctcctggaggaggacgtcaagcgcttgaagactcgaacacagcaactgcttagtcagcag
aaggacagtgatcaggaggaaagtaaaaggcttaattctgagagggagacccatctcaaa
cgcatccagcagctcatagaggagacggggaaactcaagaatgaggtggccaggagccaa
gcttcaatcacaacagctcagagccaggtgcagaacctgcaggatagccttgggaaggtc
accactgaaagagacagtctgaagaaggagctggaggcaaagaacgtggatatccaggag
aaactcaaaaccatcacgcaggtcaagaagatcggccgtcggtacaaaacccagtatgaa
gagctcaaagaacagcatgataagatggtggcagaggctgcgtctaagccagcacaggag
catgaagaccgtcaggcctcagtgcaggagattcaaaacctgaagagctcactgagtcag
acacagaacagaacctccgaactggaaactcagctggacagcatacagaagacggtgcaa
gagcgtgaagctgaggtgaagagcctgcaggagcagctggcgcaggtgcagccggagctc
agtcgtctgagagcagagcttcaggagaagagtaacctggaggagcagctccgacagcag
atcgctgagaaagaggagaagaccaagaaagccttcatgggtgccaagcagaagatcaac
cagctcaacagtgcaaaggagcagctggcaaaagagaatgaggagctaaagcagcaaaga
gaggagctggaggtgaggatgagtgcgctgaagtcccagtatgaaggccggttgagccgg
caggagagagagctgagggaactccgtgagcaacaggagagacacggagatcagaaagat
gaagctcaggagcctggccagagcaaggttcaggaggcacagaggtcatcagatgctcgc
cagatcactctcaaacccacacctgctgctgacagaggaagtgccagtacatccgagccg
cccactgccaacatcaagcccacaccagtggctgctgcccccagcaagccttcaccaatt
gcagggagtaagtctacccctagggcaagcatccgcccaatgataacacccggacctgtg
accacgcccacagccacagtcatgcccacaacacaggtggaaacgcaggaagctctccag
tccacagagagtccagtggaacatgtgactgtcttcggcagcaccagcggctcagtgcgt
tccaccagccctaacattcagactacacagccaatcctcggcctacagcagacccaagcc
actgccttcgtccagcccactcagcagcagaccagtccggagccagcaacgaccgttatg
gaggcagtacatagctcacagatggagaggccatccacttccactgctgtctttggttca
gtgtcagcaactgcaggctcatctgtgcccaagcgagcgcgagaggaagagcaggagagc
tccaccgaggtgactgacaccacacaggaagactccacccaccaacccatcacgaagaag
ctccgtatcataagaagaataggcctggaggtgagcagtgatgcttcaggcactgaggag
agtaatgatgctatgggtgaagctccaggagagagccagcagcctcctgatgccagtgag
gaagcatttcccgtgttaggtgagggagacgaagaatctttatctcagtctgtcccgatg
gatcaggtgagtgagtcccaaccctccgagtctcagatcagcggacaggactccatcgag
gagtacaagcatgacgtcatcatcatagagacagatagcggcactgaggaggaagaggag
gagcagggggagcctggagagtatgaagacgatgatgatgcagaagatgaagatgaagat
ggtgatggagggatggcagaagcagcagacgagagtaatgaaggcagtgggagtgcggat
gccaatgatgcctacgagggggatgaggcagagggtgatggagcagctgatccaggcatt
gacaacgaagagagtcaagaggcatccgattcaatccagaagcaagcggactctcagagc
agtggtgaagctagtgttagcaccctggagtcgttccctgctgagccagtccccaccacc
accaccacatcctgcctgggcctacggcttccccaacccccccggagaccacatcacacc
ccaccccctcgcctcaacatccaccccgtccctgagctcggaccccccatcatgcagaga
cagtctggacagagcagacggccctcgatgggtcgtgcaccccagctcacgcctggaatc
ggaagcatgcaacatttctttgacgatgatgacagaatggttcctagcactcccaccctt
gtggtgccacaccgtacagatggctttgcagaggccattcattcccctcaggtagccgga
gttcctcgcttccgtttcggccctcctgaggatatgatgccccaggccagctcctctcat
tctgacctgagccatctggccacacatggagggttgggcatgtatgaaagtcctctcttc
ctgcctgctcatgaagaagagtctggaggcaggagtgtccccaccacccctctacaagtg
gctgctccagtgaccgtattcacagagagccacccctctgatgtgtcggagacggcctct
cagtcggtccccatggtcagcacgtccaccggcagtctgagcgcaccaggagaagctgtc
ccaggggacgatggagatgacgtttttgtgggggaggctgagagtgaaggggcgagtagt
gaggcatgtctcgagggccagtcggagctggaatctgcacagccgaccgatgatgcaagc
atgccctccactagtcaagagcccacgtccagctccacagatcccagcaccagtagtggt
caggccaaacctgcgagccggctccttcctcagcaccagctgccgcgcaggaaccagatc
atcaggagaggcggtggttttcctcgtggaagtcggggtcgaggactcaacagaggcacc
cccttctaa
DBGET
integrated database retrieval system
