Carassius gibelio (silver crucian carp): 128027382
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Entry
128027382 CDS
T08819
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
cgib04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128027382
04082 Neuroactive ligand signaling
128027382
04519 Cadherin signaling
128027382
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128027382
Ion channels [BR:
cgib04040
]
Ligand-gated channels
GABA-A
128027382
SSDB
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
128027382
NCBI-ProteinID:
XP_052470909
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Position
A14
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AA seq
435 aa
AA seq
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MTLLLALLCLTSVADVLGKQRINSENITRILDRLLEGYDNRLRPGSGVSVTEVKTDIFVT
SFGPVSDVKMEFTMDMFFRQMWVDERLAFQGPVEILPLNNRMVDKIWTPDTFFRNARTSL
AHNMTSPNKLFRIMQNGTVFYTMRLTVSAVCPMVLMDFPMDGHTCPLLFGSYAYTNREIV
YTWRKGLQASVDFPPESSSLLQYDLVGQTLFSETYKFSTGLYSVQVVHFYLQRKLGYHLI
QTYIPLIMVVVLSQVAFWINKESVPARTVAGITTVLTMTTLSISARSSLPKVSYATAMDW
FIAVCFAFVASALVEFAAVNYFATLEANREKRRLSRASILESIAQGSDDEPETPQSDNSG
FSRRRRANSVFEAPRTRYPIFLQGSAVPPNMMLAGTSAIDKYARILFPLAFGIFNLIYWY
IYLSKDTLEKPREIE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgactcttcttttggccttgttatgtctcacaagtgttgcagatgttttaggaaagcaa
aggatcaattcagaaaatataacacggattctagaccgacttcttgagggttatgacaat
cgcctgcgtccgggatctggagtgtctgtaactgaggtcaaaaccgacatatttgtcaca
agttttggaccagtatctgatgttaagatggagttcactatggatatgtttttccgccaa
atgtgggttgacgagaggttagcctttcaggggcctgtcgaaatcttgcctttgaacaac
cgcatggtggacaagatctggacgcccgacacgttttttcgcaatgcaaggacatccctc
gcacacaacatgacgtctcctaacaagctgtttcggatcatgcaaaacgggacggtcttt
tacaccatgaggctgactgtgagtgcggtgtgtccaatggtgttgatggactttccaatg
gatggacacacatgtcctctcctgtttggaagctatgcttacactaatcgtgaaatcgtc
tacacgtggaggaaaggtcttcaagcatcagtagatttccctccagaatcatcaagctta
cttcagtatgatcttgtgggtcagaccttattcagtgaaacatataaattcagcacaggt
ctgtattctgtccaggttgtccatttctatcttcagaggaagctcggctaccatctcatc
cagacgtacatcccattgattatggtggttgtgctgtcacaagtcgcattctggatcaac
aaggagtctgtcccggctcgaacggtggctggaatcaccactgtgctcaccatgaccact
ctgagcatcagcgcccgctcctcgctgcccaaagtctcctacgccaccgccatggactgg
ttcattgccgtctgcttcgccttcgtggcttcggccctcgttgagtttgccgcggtcaac
tactttgccacgcttgaggccaacagggaaaaacgccggctctccagggcctcaattctg
gagtctatagcccaaggcagcgacgacgagccggagacgcctcagtctgataatagtggc
tttagccgcagaagacgggcaaactctgtgttcgaggcgcccaggactcgctatcccatc
ttccttcagggctcggccgtccctcccaatatgatgcttgcaggcaccagtgccatagac
aaatacgcccgcatcctcttccctctggccttcgggatcttcaacctcatctactggtac
atctacctcagcaaagacaccttggaaaagcccagggagatcgagtga
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