Carassius gibelio (silver crucian carp): 128027391
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Entry
128027391 CDS
T08819
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128027391
03036 Chromosome and associated proteins [BR:
cgib03036
]
128027391
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
128027391
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
128027391
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
YABBY
Motif
Other DBs
NCBI-GeneID:
128027391
NCBI-ProteinID:
XP_052470920
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Position
A14:7601460..7610959
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AA seq
701 aa
AA seq
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MGDTLEFNNIQTELKGSWNDGRLRFSKQSVVYKSHKTGKVDSISAPELSAAQWRRVCLGH
GIKLATSAGHIYRYDGFRDTDFEKISAFFKANYKVELAEKDMCVKGWNWGTAKFSGSLLS
FDVNESPVFEIPLASVSQCATGKNEVTVEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEELSLSLNMSEDEVEKRYE
GKLSKNMSGSLFEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQNNQYTFSNIEREEYGKLFDFVN
AKKLNIKNRGIKEGMKGADGYSDSDEDQHDAYLERMKEEGKIREEGDGSDESEGDSDESF
NPGEEDEDVPEEYDSNASVSDSEADDADSEDEAKKKKPEKKPKKVVKEKKERKPRKEKKV
KDPGAPKRPMSAYMLWLNGNRERIKSENPGISVTEISKKAGEMWKQLSKDRKEEWDRKAE
EAKKQYEKAMKEYRESGGGATAASVTKEKKKKGGKVEAKKKSGGEKEKKKEPVNESFKSK
EFISSEESSSESDRDRGSKRKASEDEEDEDTPASSEESGSD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaataacattcaaacggagttgaagggatcttggaatgac
ggccgtctgaggttcagcaagcagtcggtggtctataaaagccataaaacagggaaggtg
gacagtatctcggctccggagctgtctgcggctcagtggcgtcgcgtctgtctcggtcac
gggatcaaactggccaccagcgccggacacatctacagatacgacggcttcagagacacc
gatttcgagaagatctcggcgttttttaaagcgaactacaaggttgagttggcggagaag
gacatgtgtgtgaagggctggaactggggcactgccaaattctcagggtctctgctgtcg
tttgatgtgaacgaaagtcccgtcttcgagatcccgctggccagcgtatcccagtgtgca
acagggaagaacgaggtgacggtggagtttcatcagaacgacgacgcagaggtgtccctc
atggaggtccgcttctatgtgcctcccaacaccggagacgacggatcggaccctgtggag
gcgttcgctcagaatgttctctcgaaggcagatgtcatccaggccaccggagacgctgtg
tgcatctttaaagagcttcagtgtctgacgccgagaggaaggtatgatatccgtatctac
cccaccttcctccacctgcacgggaagacgtttgactataagatcccttacaccaccgtg
ctgcggctcttcctgctgccgcacaaggaccagaggcagatgttcttcgtgatcagtctg
gatccgcccattaaacagggtcagacgcgttatcacttcctcatcctcctcttctctaaa
gatgaagagctgagtctgtctctgaacatgagcgaggacgaggtggagaagcgttacgaa
ggcaagctcagtaagaacatgtccgggtcgctcttcgagatcgtcagcagggtcatgaag
gctctggtcaacaggaagatcacggtgcccggaaacttccagggtcactcgggctctcag
tgtataacgtgtgcgtacaaggcgagctcagggctgctgtatcctctggagcgaggcttc
atctacgtgcacaagcctccggttcacctgcgcttcgaggagatctcctgcgtgaacttc
gccagaggaaccaccaccacacgctccttcgacttcgagatcgagaccaagcagaacaac
cagtacaccttcagcaacatcgagagggaagaatacgggaaactctttgactttgtcaac
gccaagaagctgaacatcaagaacagaggaatcaaagagggcatgaaaggagccgacggc
tacagcgactctgatgaagaccagcatgatgcttacctggagcggatgaaagaagagggc
aagatccgggaggagggagacggcagcgacgaatccgagggagacagcgacgagtctttc
aaccctggagaagaggatgaagacgtccctgaagagtatgacagcaacgcttcagtgagc
gacagcgaggcggacgacgcagacagcgaggatgaagccaagaagaagaagcctgaaaag
aagcccaagaaagtggtgaaggagaagaaagagaggaaaccacggaaagagaagaaggtg
aaggaccccggggccccgaagagaccgatgagcgcttacatgctgtggctgaacggcaac
cgagagcgaatcaagagcgagaatcctgggatatctgtcaccgaaatctccaagaaggct
ggagagatgtggaagcagctgagcaaagaccgcaaagaggaatgggaccgaaaagcagaa
gaggccaagaaacaatatgagaaagccatgaaggagtacagagagagtggaggaggagcg
acagcagcgtctgttaccaaagaaaagaaaaagaaaggaggaaaggtggaggccaagaag
aagagtggaggagaaaaggagaagaagaaggaacctgtaaacgagagctttaagagtaaa
gagttcatctcgagcgaggagagctcgtctgaatctgatcgggacagaggcagcaaacgc
aaggcctctgaggatgaggaggatgaggacacacccgccagctcagaggagtccgggtcc
gactga
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