Carassius gibelio (silver crucian carp): 128027468
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Entry
128027468 CDS
T08819
Name
(RefSeq) protocadherin-19-like isoform X1
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128027468
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
128027468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
128027468
NCBI-ProteinID:
XP_052471074
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Position
A14:complement(10461355..10515685)
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AA seq
1094 aa
AA seq
DB search
MHSKDADFVQMFLCFLLCWTGVDGVFNLKYTVEEELRPGTKIANVTADAKVAGFALGNRQ
PYLRVISNSEPRWVNLSPAGLLITKQKIDRDAVCRQTPKCFISLEVMSNLMEICVIKIEI
IDVNDNAPRFPTNHIDIEISENAAPGTRFPLEGASDPDSGSNGIQTYTITPNDIFGLEIK
SRGDGSKIAELVVEKTLDRETQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFD
EPAYTVNVLENSPINTLVIDLNATDPDEGTNGEVVYSFINFVSNLTKQMFKIDPKTGVIT
VNGVLDHEELSVHEIDVLAKDLGPNSIPAHCKVIVNVIDINDNAPEIKLLSENSEMVEVS
ENAPLGYVIALVRVSDSDSGANGKVQCRLQGNVPFRLNEFESFSTLLVDGRLDREQRDTY
NLTILAEDSGYPPLRSSKSFSVKVTDENDNPPYFTKPHYQAMVLENNVPGAFLLAVSARD
PDLGMNGTVSYEIIKSEVRGMSVESYVTVNSNGEIYGVRAFNHEDTRTFEFKVSAKDGGD
PPLTSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPKNAGVGYLVTQIKADDYDEGEN
GRLTYSISEGDMAYFEIDQINGEVRTTKTFGENAKPSYQITVVAHDHGQTSLSASAYIVI
YLSPDLNAQEQIGPVNLSLIFIIALGSIAVILFVTMVFVAVKCKRDNKEIRTYNCSFLYL
RRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTL
PLGCRRSESTFLNVENQNSRNAAPNHGYHHTFTGQGPQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKSTSTFKDMEGNSLKDSGHEESDQTDSEHDVQRGHYADTAVNDVLNMTVPP
NNSQLPDQDQSEGFHCQDECRILGHSDRCWMPRVPMPARAKSPEHGRNVIALSIEATTVD
VPHYEDCGTTKRTFATFGKDGPDEERVEQRGRRQTAEPAVCSPKTNGTVREAGNGREAVS
PITSPVHLKSPQSKPPSTYNTLKCRDAERIANHSLLRQPEGKDSEPAMREINTLLQDGRE
KESPGNKRLKDIVL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcattccaaggacgcggatttcgtacaaatgtttttgtgctttctcttgtgctggact
ggagtcgatggcgttttcaatttgaaatacaccgtggaagaagagctgcgtccgggcaca
aagatagccaacgtgacggcggacgcaaaagttgcgggttttgcactgggaaaccgacag
ccttatttgcgggttatctccaattccgagccgcgatgggttaatctgagccccgccgga
ctgctcatcacaaagcaaaaaattgatcgggacgctgtttgccgacagacacctaagtgt
tttatttctttggaagtgatgtcgaacttgatggagatctgcgtgattaaaattgagatt
attgacgtaaacgacaacgcgccgcgcttccccactaaccacatcgacatagaaatctcg
gaaaatgccgctcccggtaccagatttcccctagagggggcaagcgatccggactccggg
agcaacggcattcagacgtacacaattacccctaatgatattttcggtcttgagattaag
tcgaggggagacgggtccaaaatcgcagaacttgtggtggaaaagactttagacagagag
acgcagtcacgttacacgtttgaactcacagcggaggatggcggagaccccccgaagtcc
gggactgtgcaacttaacataaaagtcattgattcgaacgataacaaccccgttttcgac
gagccagcatacactgtaaacgtgctggagaattctcccattaacaccttagtcatagac
ttgaacgctacggacccagacgaaggaaccaatggcgaggtggtctactcgttcataaac
tttgtatccaacctgaccaaacaaatgtttaaaatcgaccccaaaacaggcgtgataaca
gtgaatggcgttttggaccacgaggaattgtccgtccacgaaattgatgtactagccaaa
gatctgggtccaaattcaatccctgcccactgcaaagtgatcgttaatgtaatcgacata
aatgacaacgcgccagaaatcaaactgttgtcagaaaacagcgagatggtggaggtgagc
gagaacgcgcctctcggatatgtaatagctctggtgagagtctcagacagtgattccgga
gcgaatggaaaagtgcagtgcagactgcagggcaatgtgccttttagactcaacgagttt
gagagcttctccaccttacttgttgatggccgtctggatagggagcagagagacacgtac
aatttgaccattctagccgaggacagcgggtatcccccgctcagaagctccaaatcattt
tcagtgaaagtaacggatgaaaacgacaaccccccttacttcaccaagccacattatcaa
gccatggtcctcgaaaataacgtcccaggtgcgtttctgctggcggtgtccgccagggac
ccagacctgggcatgaacggcaccgtgtcctacgagatcatcaaatcggaggtgcggggc
atgtctgtggaatcttacgttaccgtgaactcaaacggcgagatctacggcgttagggct
tttaatcacgaagatacgcggacttttgagtttaaagtctctgcaaaggatggaggagat
ccacctttgaccagcaacgccaccgtgcgcattgttgtactggatgtaaatgacaacaca
cctgtgatgaccaccccgcccctggtgaacggcacggcggaggtgtccattcctaaaaac
gctggagttggttatttggttactcagataaaagctgatgattacgacgagggggaaaac
ggaaggttaacgtattcgatttcagaaggagacatggcctactttgaaatagatcagata
aacggcgaggtgcgaaccacaaagacgtttggggagaatgcgaaaccatcctatcagata
accgtggtggcgcacgaccacggccaaacctctctctctgcctctgcctatattgtcatt
tatctctctcctgatctcaatgcacaggagcaaataggacccgtcaacctgtcgctcatt
ttcatcattgccctgggttctattgcagtcatcctgtttgtcacaatggtctttgtggca
gtcaagtgcaaaagggataacaaggaaatccgaacatacaactgcagtttcttgtacctg
cgcagggtggcggagtactcctacggcaaccagaagaagtccagcaagaaaaagaagctg
agcaagaatgacatccgcctggtgccgcgggacgtggaggagacagacaagatgaatgtg
gtgagttgctcgtctctcacctcttcgctcaactacttcgactaccaccagcagactctg
ccactgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactccagg
aatgctgcacccaaccatggctaccaccataccttcacagggcagggccctcagcagcct
gacctcatcatcaacggcatgccgctgcctgagacggagaattattccattgactccagt
tatgtaaacagcagagcacacctaattaaaagcacgtcaacgttcaaggacatggaagga
aacagtctgaaggacagtggccatgaggagagtgaccaaaccgacagcgaacacgacgtt
cagagggggcactatgccgacacagctgtcaacgacgtactgaatatgaccgtacccccc
aacaactcccagctacctgaccaagatcagtcagagggttttcactgccaagatgaatgt
cgtatcctgggccactcggaccgctgctggatgccccgggtgccgatgccggcaagagcc
aagtctcctgaacacggccgcaacgtcatcgctctatctatcgaggccaccaccgtggac
gtacctcactatgaggactgtggcaccaccaaaaggacttttgccacctttggcaaagac
gggccagatgaggagcgggtcgaacagaggggcaggcggcaaacggcagagccagccgtc
tgcagccccaagactaatggcactgtgcgcgaagctggaaacggccgggaggccgtcagc
ccaatcacctccccagtgcacctgaagagcccccagtccaaaccaccctccacctacaac
acactgaaatgccgggacgcagagcgcatagccaaccacagcctgctgcggcagccagag
gggaaagacagtgagccggccatgcgggagatcaacacgctcctgcaggacgggcgtgag
aaggagtcccccggcaacaagcggttgaaggacattgtgctttaa
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