Carassius gibelio (silver crucian carp): 128027488
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Entry
128027488 CDS
T08819
Name
(RefSeq) integrin alpha-6
KO
K06485
integrin alpha 6
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04382
Cornified envelope formation
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04514
Cell adhesion molecule (CAM) interaction
cgib04518
Integrin signaling
cgib04810
Regulation of actin cytoskeleton
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128027488
04514 Cell adhesion molecule (CAM) interaction
128027488
04518 Integrin signaling
128027488
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128027488
09142 Cell motility
04820 Cytoskeleton in muscle cells
128027488
04810 Regulation of actin cytoskeleton
128027488
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128027488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128027488
04515 Cell adhesion molecules [BR:
cgib04515
]
128027488
04090 CD molecules [BR:
cgib04090
]
128027488
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128027488
Exosomal proteins of breast milk
128027488
Cell adhesion molecules [BR:
cgib04515
]
Integrins
Integrin alpha subunits
128027488
CD molecules [BR:
cgib04090
]
Proteins
128027488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
DUF11
Motif
Other DBs
NCBI-GeneID:
128027488
NCBI-ProteinID:
XP_052471125
LinkDB
All DBs
Position
A14:complement(10973089..10982760)
Genome browser
AA seq
1042 aa
AA seq
DB search
MLFSQWALLLTVCMLQPRRVSSFNLDTQNVMKKSGEADTLFGFAMAMHHQLKPSEERVLL
IGAPRAKAFPGQNANISGGLYRCKFTQSNDCERIQVDIKERSTNNPGKDYREKQWLGVRV
RSQGPGGKVVTCAHRYQDWSFENQRLLGRCFVLEQDLTLMTDGESTRTICRNRQPDKHKF
GYCQQGVSVAFSKDNRYLVYGAPGAYDWKGIVHMEPVDDFSIEAYETGDHNQREHRLIPV
DISSFLGFVVDTGMNLMKKGELNVVAGAPRSNHSGEVLLLRMEEKAEMRNLKAEYILQGP
GLASSFGYDLTVLDINSDGWDDLVVGAPEFSNISLEEDVGGAVYVYINQPKGQRWNQIKP
VCLYGKRDSMFGLAVAHIGDINQDGYQDFAVSAPNEDAGRGRVYIYHGSAAGFHKKPEVL
DAGNPGIKSFGYSLAGNMDIDNNGYPDLAVGSLSDTVQVYRSKPVVNLEKTLTLTPNAID
FKAQGCKRSSCYITAQSCFNYTAPTPTYNHKLRIKYTLKADTVRIERGLPSRVVFENSVA
AQGDQELSVQGKRECVQTKLRLLGDIQDKLTIISISLSVSLPSNNPKQTFRNLPSLEPVL
NALQENATKAEVTFINAGCGSDNICQSNLKLQYSFCTKDQQEDKCDPLAMENYIPVISPG
DENIALEVTVTNKGGDDAHQSQLSVAFPEFLRLSSVELKKSSETQVHCNPNENKTQANCQ
LGNPFKRDSEVSFFLILAIERISLRVTSANVTMSLKTISIQDIPVVITEVKIAFELHLKI
VGLAKPSQLFFGGEVKDEKAMKSEDDIGSSVQYEFWISNLGWPLKSFSSVVLNIQWPKTT
KDGKRLLYLVQIKDQGKNIIHCTPAEVINPLQFIKASSRGRREAEHEPDLKALVSTSDFI
PFLGNERKYQILTCAADDLRCVDIKCPLEALDSTTAVVLHARLWNNTFLEDYSSLNYLDI
VLDAFLTLNGTQENIRMKQSETKVKVKLTVFREIKPALFSRVPWWVIFLSIMTAPLLLAL
FLYLLWKFECLNCGICAKEKNV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcagtcagtgggctctccttttgaccgtgtgtatgcttcagccacggcgggtt
tcttcttttaacctggacacgcagaacgtgatgaagaagagtggcgaagctgacactttg
tttgggtttgctatggccatgcatcatcagctcaagccttcagaggagcgcgtattgctg
attggagcccctcgtgctaaagcattccccggtcaaaatgccaacatatctggaggtctg
tacagatgtaaattcacacaatctaatgattgtgaacgcattcaagttgatataaaagaa
cgttcaacaaacaatcctggaaaagattatagagaaaaacaatggctgggtgtccgtgtc
cgaagtcagggaccaggaggcaaagtagtgacttgtgcccacaggtaccaggattggagt
tttgaaaaccagcgtttattgggcagatgttttgtcctggaacaggaccttaccttgatg
acggatggagagtccactcgaacaatttgtaggaatcggcaaccagataagcacaagttt
ggctactgtcaacaaggcgtctctgtagcattttccaaagacaacagatatcttgtttat
ggagctccaggagcatatgactggaaaggcatcgtgcacatggagcctgttgatgacttc
tctatagaggcctatgaaacgggagatcataatcagcgtgaacacaggcttattcctgtg
gacatcagcagctttttaggctttgttgtcgatactgggatgaacctaatgaagaaagga
gagctgaatgtcgttgctggggctccgcgctcaaaccacagtggggaggttttgctgctg
agaatggaagaaaaggcagaaatgaggaacttgaaagcggagtacatccttcaaggccca
ggtttggcctcctcctttggatatgacctcactgttcttgacataaactcagatgggtgg
gatgatcttgttgtgggtgcaccggagttctccaacataagcttggaggaagatgtagga
ggggctgtgtatgtttacatcaaccaacccaaagggcaacgctggaaccaaatcaaacca
gtgtgtctgtacgggaaaagggactccatgtttggactagcagtggcacatattggggat
atcaatcaagatggataccaagattttgcagtgagtgctcctaatgaggatgcaggcaga
ggtcgagtgtacatatatcatggttcagctgcagggtttcataaaaaaccagaggtttta
gatgctggaaaccctggtatcaaatcatttggctattctttggctggaaacatggatata
gataataacggctatccagaccttgctgtgggttcactttcagatactgtgcaagtttac
aggtctaaaccagtggtaaacctagaaaagaccttaacattaacaccaaatgctattgat
ttcaaggcccagggctgcaagagatcttcatgctatattacagctcagtcctgcttcaat
tacactgccccgacacctacatacaatcacaaactgaggatcaagtacacactaaaggct
gatacggtgcggatagagaggggtctaccttcacgagtggtctttgagaattctgtggct
gcacagggagaccaggaactgtctgtccagggcaaacgagagtgcgtccagaccaagctt
aggctgctgggagatatccaggacaagctgaccatcatttccatcagtctgtctgtttct
ttgccgtccaacaatccgaaacagacattcagaaacctccctagcttagagccagttctg
aacgctctgcaagaaaatgcaaccaaagcagaagtcacctttataaatgccggctgtgga
agtgacaacatctgtcaaagtaacctgaagctccagtatagcttctgcaccaaagaccaa
caagaagacaaatgtgaccctctagccatggaaaattatattcctgtcatttctcctggt
gatgagaacattgccctggaggtcactgtaaccaacaaaggtggagatgatgctcaccag
agtcaactttctgtggcgtttccagaatttctgcgcctctcatcagttgagctgaagaag
agtagtgaaacacaggtgcattgcaaccccaatgaaaataaaacacaggccaactgtcag
cttggaaatccctttaaaagagattcagaggtctcattcttccttattcttgccatagaa
aggatttccttgagagtaacaagcgcaaatgtgactatgtcccttaaaacgatcagcatt
caagatattccagtagtcattacagaagtaaaaattgcctttgaactgcatctgaaaatc
gttggtcttgctaaaccttcccaattattctttggaggagaagtaaaagatgagaaagca
atgaaatcagaagatgatattggctcttcggtccaatatgagttctggatcagtaacctt
ggttggcctctgaagtccttcagttctgttgtgctgaacattcagtggccaaaaacaaca
aaggatggaaaacggctcctgtaccttgtgcagatcaaggatcaaggaaaaaatattatt
cactgcacaccagcagaggtcatcaacccactccaatttatcaaggcgtcatccagagga
cggcgtgaagcagagcatgaaccagacctgaaggctcttgtttccacatcagattttatc
ccctttttgggcaacgaaagaaagtatcaaatcctgacatgtgcagctgatgacttgaga
tgtgtggatataaagtgccctcttgaggcattggacagcactactgctgttgttcttcat
gcacgcttatggaacaatacttttcttgaggactatagttcattgaactacttggatatt
gtactggatgcatttttgactcttaatgggactcaggagaatattaggatgaagcaatct
gagactaaagttaaggtgaagctaactgtttttcgtgaaataaagcctgctttgttcagt
cgagtcccatggtgggtcatttttttgagcataatgactgcaccgctgttactggctctg
ttcctttacctgttatggaagtttgaatgcttgaattgtggaatttgtgccaaagaaaaa
aacgtataa
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integrated database retrieval system