KEGG   Carassius gibelio (silver crucian carp): 128027488
Entry
128027488         CDS       T08819                                 
Name
(RefSeq) integrin alpha-6
  KO
K06485  integrin alpha 6
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04382  Cornified envelope formation
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04514  Cell adhesion molecule (CAM) interaction
cgib04518  Integrin signaling
cgib04810  Regulation of actin cytoskeleton
cgib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128027488
   04514 Cell adhesion molecule (CAM) interaction
    128027488
   04518 Integrin signaling
    128027488
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128027488
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128027488
   04810 Regulation of actin cytoskeleton
    128027488
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    128027488
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128027488
   04515 Cell adhesion molecules [BR:cgib04515]
    128027488
   04090 CD molecules [BR:cgib04090]
    128027488
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128027488
  Exosomal proteins of breast milk
   128027488
Cell adhesion molecules [BR:cgib04515]
 Integrins
  Integrin alpha subunits
   128027488
CD molecules [BR:cgib04090]
 Proteins
  128027488
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 DUF11
Other DBs
NCBI-GeneID: 128027488
NCBI-ProteinID: XP_052471125
LinkDB
Position
A14:complement(10973089..10982760)
AA seq 1042 aa
MLFSQWALLLTVCMLQPRRVSSFNLDTQNVMKKSGEADTLFGFAMAMHHQLKPSEERVLL
IGAPRAKAFPGQNANISGGLYRCKFTQSNDCERIQVDIKERSTNNPGKDYREKQWLGVRV
RSQGPGGKVVTCAHRYQDWSFENQRLLGRCFVLEQDLTLMTDGESTRTICRNRQPDKHKF
GYCQQGVSVAFSKDNRYLVYGAPGAYDWKGIVHMEPVDDFSIEAYETGDHNQREHRLIPV
DISSFLGFVVDTGMNLMKKGELNVVAGAPRSNHSGEVLLLRMEEKAEMRNLKAEYILQGP
GLASSFGYDLTVLDINSDGWDDLVVGAPEFSNISLEEDVGGAVYVYINQPKGQRWNQIKP
VCLYGKRDSMFGLAVAHIGDINQDGYQDFAVSAPNEDAGRGRVYIYHGSAAGFHKKPEVL
DAGNPGIKSFGYSLAGNMDIDNNGYPDLAVGSLSDTVQVYRSKPVVNLEKTLTLTPNAID
FKAQGCKRSSCYITAQSCFNYTAPTPTYNHKLRIKYTLKADTVRIERGLPSRVVFENSVA
AQGDQELSVQGKRECVQTKLRLLGDIQDKLTIISISLSVSLPSNNPKQTFRNLPSLEPVL
NALQENATKAEVTFINAGCGSDNICQSNLKLQYSFCTKDQQEDKCDPLAMENYIPVISPG
DENIALEVTVTNKGGDDAHQSQLSVAFPEFLRLSSVELKKSSETQVHCNPNENKTQANCQ
LGNPFKRDSEVSFFLILAIERISLRVTSANVTMSLKTISIQDIPVVITEVKIAFELHLKI
VGLAKPSQLFFGGEVKDEKAMKSEDDIGSSVQYEFWISNLGWPLKSFSSVVLNIQWPKTT
KDGKRLLYLVQIKDQGKNIIHCTPAEVINPLQFIKASSRGRREAEHEPDLKALVSTSDFI
PFLGNERKYQILTCAADDLRCVDIKCPLEALDSTTAVVLHARLWNNTFLEDYSSLNYLDI
VLDAFLTLNGTQENIRMKQSETKVKVKLTVFREIKPALFSRVPWWVIFLSIMTAPLLLAL
FLYLLWKFECLNCGICAKEKNV
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgttgttcagtcagtgggctctccttttgaccgtgtgtatgcttcagccacggcgggtt
tcttcttttaacctggacacgcagaacgtgatgaagaagagtggcgaagctgacactttg
tttgggtttgctatggccatgcatcatcagctcaagccttcagaggagcgcgtattgctg
attggagcccctcgtgctaaagcattccccggtcaaaatgccaacatatctggaggtctg
tacagatgtaaattcacacaatctaatgattgtgaacgcattcaagttgatataaaagaa
cgttcaacaaacaatcctggaaaagattatagagaaaaacaatggctgggtgtccgtgtc
cgaagtcagggaccaggaggcaaagtagtgacttgtgcccacaggtaccaggattggagt
tttgaaaaccagcgtttattgggcagatgttttgtcctggaacaggaccttaccttgatg
acggatggagagtccactcgaacaatttgtaggaatcggcaaccagataagcacaagttt
ggctactgtcaacaaggcgtctctgtagcattttccaaagacaacagatatcttgtttat
ggagctccaggagcatatgactggaaaggcatcgtgcacatggagcctgttgatgacttc
tctatagaggcctatgaaacgggagatcataatcagcgtgaacacaggcttattcctgtg
gacatcagcagctttttaggctttgttgtcgatactgggatgaacctaatgaagaaagga
gagctgaatgtcgttgctggggctccgcgctcaaaccacagtggggaggttttgctgctg
agaatggaagaaaaggcagaaatgaggaacttgaaagcggagtacatccttcaaggccca
ggtttggcctcctcctttggatatgacctcactgttcttgacataaactcagatgggtgg
gatgatcttgttgtgggtgcaccggagttctccaacataagcttggaggaagatgtagga
ggggctgtgtatgtttacatcaaccaacccaaagggcaacgctggaaccaaatcaaacca
gtgtgtctgtacgggaaaagggactccatgtttggactagcagtggcacatattggggat
atcaatcaagatggataccaagattttgcagtgagtgctcctaatgaggatgcaggcaga
ggtcgagtgtacatatatcatggttcagctgcagggtttcataaaaaaccagaggtttta
gatgctggaaaccctggtatcaaatcatttggctattctttggctggaaacatggatata
gataataacggctatccagaccttgctgtgggttcactttcagatactgtgcaagtttac
aggtctaaaccagtggtaaacctagaaaagaccttaacattaacaccaaatgctattgat
ttcaaggcccagggctgcaagagatcttcatgctatattacagctcagtcctgcttcaat
tacactgccccgacacctacatacaatcacaaactgaggatcaagtacacactaaaggct
gatacggtgcggatagagaggggtctaccttcacgagtggtctttgagaattctgtggct
gcacagggagaccaggaactgtctgtccagggcaaacgagagtgcgtccagaccaagctt
aggctgctgggagatatccaggacaagctgaccatcatttccatcagtctgtctgtttct
ttgccgtccaacaatccgaaacagacattcagaaacctccctagcttagagccagttctg
aacgctctgcaagaaaatgcaaccaaagcagaagtcacctttataaatgccggctgtgga
agtgacaacatctgtcaaagtaacctgaagctccagtatagcttctgcaccaaagaccaa
caagaagacaaatgtgaccctctagccatggaaaattatattcctgtcatttctcctggt
gatgagaacattgccctggaggtcactgtaaccaacaaaggtggagatgatgctcaccag
agtcaactttctgtggcgtttccagaatttctgcgcctctcatcagttgagctgaagaag
agtagtgaaacacaggtgcattgcaaccccaatgaaaataaaacacaggccaactgtcag
cttggaaatccctttaaaagagattcagaggtctcattcttccttattcttgccatagaa
aggatttccttgagagtaacaagcgcaaatgtgactatgtcccttaaaacgatcagcatt
caagatattccagtagtcattacagaagtaaaaattgcctttgaactgcatctgaaaatc
gttggtcttgctaaaccttcccaattattctttggaggagaagtaaaagatgagaaagca
atgaaatcagaagatgatattggctcttcggtccaatatgagttctggatcagtaacctt
ggttggcctctgaagtccttcagttctgttgtgctgaacattcagtggccaaaaacaaca
aaggatggaaaacggctcctgtaccttgtgcagatcaaggatcaaggaaaaaatattatt
cactgcacaccagcagaggtcatcaacccactccaatttatcaaggcgtcatccagagga
cggcgtgaagcagagcatgaaccagacctgaaggctcttgtttccacatcagattttatc
ccctttttgggcaacgaaagaaagtatcaaatcctgacatgtgcagctgatgacttgaga
tgtgtggatataaagtgccctcttgaggcattggacagcactactgctgttgttcttcat
gcacgcttatggaacaatacttttcttgaggactatagttcattgaactacttggatatt
gtactggatgcatttttgactcttaatgggactcaggagaatattaggatgaagcaatct
gagactaaagttaaggtgaagctaactgtttttcgtgaaataaagcctgctttgttcagt
cgagtcccatggtgggtcatttttttgagcataatgactgcaccgctgttactggctctg
ttcctttacctgttatggaagtttgaatgcttgaattgtggaatttgtgccaaagaaaaa
aacgtataa

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