Carassius gibelio (silver crucian carp): 128027492
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Entry
128027492 CDS
T08819
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128027492
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
128027492
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
128027492
NCBI-ProteinID:
XP_052471130
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All DBs
Position
A14:complement(11587509..11600886)
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AA seq
1028 aa
AA seq
DB search
MFVFLLLLCLSDGVVSQIRYSVPEEAEHGTFVGNIAEDLGLDLTKLSSRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDRERICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDFTVEISESATPGTRFPLESAFDPDVGSNALRTYDITNNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQALHRYVLTAVDGGQPPRTGTALLVVRVLDSNDNVPVFDQPVYSVNLAE
NAPVGTLVMQLNATDSDEGPNGEVIYSFSNHITTRVKELFDIDARTGRIEVRGEVDFEES
SLYQIYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIIFSTVTESVSENAATGTVIALLS
VTDKDSEDNGQTHVEILGDVPFKLKTSFRNYYTIVTDGPLNRETVEAYTITVVARDKGIP
SLATSKSIKVHVSDENDNAPAFTQPIYDVYVTENNVPGAYIYAVSAVDPDVGQNAYITYS
IVECEIQGMSVVTYVSINSENGYLYALRSFDYEQLKDFSFTVQARDSGSPELWSNATVNV
IIVDQNDNAPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSVQRGN
ENGMFRMDWRTGELRTARRVSVKRDPQQLYELLIEVRDHGQPPMSCSAVVQVTLVDSLVE
GHSGERGTAKAKDASLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYSTCLASD
CCCLVGCGSCGSGACCGRQARAARKKKKLSKSDIMLVQSTNTANVSVASAAQVPVEESGS
FGSLHQSQNYCYQVCLTPESAKTDLMFLKACSPSRSNDTEHNPCGAIVTGYTDQQQPDII
SNGSLLSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDAMHR
GHSSGADLFSNCTEECKALGHSDRCWMPSFVPTEARQGADYRSNLHVPGMDSVPNSEVFE
GETLVGDQSFSTFGKETPHLPNQMHQHQHQHHQHHLSASTLERKEFDALLCNSRMPYKAA
CLSRKRIC
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtttttgctcctgctgtgtctctcggatggggtagtttcgcagatacgttat
tctgtgccagaggaagcggagcatggcacgtttgtgggaaatatcgccgaggatttggga
ctggaccttacaaaactttcatctcgccgctttcaggtggtgcccagctcgcggacgccg
tacctggaagtaaacttggagaacggggtgcttttcgttaacgagaaaatcgaccgggag
cgcatctgtaagcagagtgccagctgtttgcttcacctggaggtgttcctggagaaccca
ctcgagctctttcgtgtggagatagaggtggtggacatcaacgacaacccgccgagcttc
ccggagacagacttcaccgtggaaatatccgagagcgcgaccccgggtacgcgcttcccg
ttggagagcgcctttgatccggatgtcggtagtaacgcattgcgcacttacgacatcacc
aacaacaactatttctacctagacgtgcaaacacagactgacggcaacaaattcgcagag
ctggttttagaaaagccacttgatcgagaacagcaagcgttgcaccgttacgtcctcacg
gccgtggacggcggccagccccctcggacaggtacagctctgcttgtggtcagagtgctc
gactccaacgacaacgtcccggtgtttgatcagccggtatactcggttaacctggccgag
aacgcgcccgtgggcacgctcgtcatgcagctgaacgcgaccgactcagacgagggcccg
aacggggaggtcatttactcgttcagcaaccacatcacaaccagagtcaaggaactgttc
gatatcgatgcccgaacgggccgtatagaggtcagaggtgaggtggactttgaggagagc
agcctgtatcagatttacgtgcaagcgaaagacatgggacctaatgccgtgccagcgcac
tgtaaagttttggtcaaagtgacggacgtcaacgacaacgcaccagagatcatctttagc
accgtgacggagtctgtgagcgaaaacgcagccacgggcaccgtgatcgctctgctcagc
gtcaccgataaagactcagaagacaacggccagacgcatgtggaaattctcggagatgtt
ccttttaaactcaaaacctctttcagaaattattacactattgtgactgacggtcctcta
aaccgagagactgtagaggcgtacacaatcaccgtagttgcgagagataaagggatccca
tctctggcaaccagcaaatcaatcaaagtgcacgtgtctgacgagaacgacaacgcgcca
gcgtttacgcagcccatttatgatgtgtatgtgaccgaaaacaacgtcccaggtgcttac
atctacgctgtcagtgcagtcgatcctgatgtcggacagaatgcttatataacttactcc
atagtggagtgtgaaatacagggtatgtctgtggtcacgtatgtgtccatcaactcggag
aatgggtatctgtatgccctcagatcgtttgattatgagcaacttaaagacttcagcttc
acggttcaagccagagactcaggcagccccgagctgtggtccaacgccacagtgaacgtc
attatagtggatcagaacgataacgcgccgtctgtaattgcgcctcttggaaaaaatggc
actgcgcgggagcctttgccgcgctctgccgagccaggttacctagttactcgcattgtc
gccatggatgcagatgatggagagaacgcgcgtttgtcatacagtgtacagagagggaat
gagaatgggatgttcagaatggactggcgcaccggggagttgcgcacggcccgccgggtg
tcagtcaaacgagacccgcaacagctttatgagctgctgattgaggtaagggatcacggg
cagcctcctatgtcgtgcagcgctgtggtgcaggtgacactcgtggacagtctcgtggag
ggccacagtggagagcgcggcacggccaaggccaaagacgcgtctctggacttgacgctc
atcctcatcatcgcgctcggctccgtttccttcatcttcctgcttgctatgattgtactg
gccgtgcgctgtcagaaggacaaaaagctgaacatctacagcacctgcctggcgagcgac
tgctgctgcctggtgggctgcggatcgtgcgggtcaggtgcctgctgcggacgccaggcc
cgggccgcacgtaaaaagaagaaactgagcaagtcagacatcatgctggtccaaagcacc
aacacagccaacgtgagcgtggcgagtgccgcgcaggtgcccgtggaagagtcagggagc
ttcggctcgctccatcaaagtcagaactactgctaccaggtatgtctgactccggaatcg
gccaaaacggacctcatgttcctgaaggcctgcagcccgtcgcgcagcaatgacaccgag
cacaatccgtgcggagccatagtgaccggatatacggaccaacagcagccggacatcata
tccaacggcagcctgctctccagtgagacaaaacaccagagagcagaactcagttatttg
gtagaccgaccaaggcgtgttaacagttctgctttccaggaggcagatatcgtgagctca
aaagacagcggccatggagacagtgagcagggagacagcgaccatgatgccatgcatcgt
ggacattcctccggagcagacctgttctccaactgcacagaggagtgcaaagcccttggc
cactcagatcgctgctggatgccaagttttgtgcccaccgaggcacgacagggcgccgat
taccgcagcaacctgcacgtgccgggcatggactctgtgcccaactctgaggtatttgag
ggcgagacgctggtgggcgatcagtcattctcaacctttggcaaagagacgccacacctc
cccaaccagatgcatcaacaccaacatcaacaccatcaacatcacctcagtgcttccacg
ctagagaggaaagagttcgatgcacttctgtgtaactctcgcatgccttacaaagccgcc
tgtctctcgcggaaaaggatatgctag
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