Carassius gibelio (silver crucian carp): 128027493
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Entry
128027493 CDS
T08819
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128027493
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128027493
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_14
Ig_2
V-set
LRR_9
LRRNT
LRR_RPS2
DUF7617
C2-set_2
C2-set_3
Ig_6
Motif
Other DBs
NCBI-GeneID:
128027493
NCBI-ProteinID:
XP_052471132
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Position
A14:11988253..12206430
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AA seq
615 aa
AA seq
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MVDCLSRVMLHTAVSCWQPLLGLALVAVFVGSTLACPARCECSAQSRSVICHRKRYNAIP
DGVPIETRILDLSKNRIPAVNPDDFAAYPHIEELDLSGNIIAYVEPGAFNSLYSLHTLSL
KSNRIKLLSLGVFSGLSNLTNLDISDNKVVILVDYMFQDLRNLRSLEIGDNELIYISHRA
FSGLLSLESLTLERCNLTVVPTDALSHLHNLVSLHMRYLSISTLHPYSFKKLFHLRHLEI
DNWPSLDAVPINSLHGLNLTTLSITNTNLSTFPYQALRHLPYLTHLNLSYSHIRVVEGGL
LKDLVRLHELRLAGSQLVSIEPYAFQGIRWLRLLNVSQNRLDTLERGVFHAPEALEVLLI
NNNPLVCDCRLMWLLQRRHSISFGDTQPECSTPEGIQGRPFKEFKETLLSYYVTCSKPKI
RENRTQMVSVEEGQSARLHCSADGTPRPTISWVTPRRRHLTTRSHGRVTVHNNGSLDIKA
AEVQDDGVYMCVASSTAGNDTLMVSLAVKSLGSLYANRTQHYTDTSNATANGTNLPNVTF
GLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSAEE
ADQGAGPRRFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggactgtttgagtcgagtcatgctgcatacagccgtgtcttgctggcagcctttg
ctggggctcgccttggtggccgtgttcgtgggctccactctggcctgccccgcccgctgc
gagtgctccgcccagagccgctctgtcatctgccaccgcaagcgctacaacgccatccct
gatggagtcccaattgagacacgaatccttgatctcagcaagaatcgcattccggcagtc
aaccctgatgactttgctgcatatccacacatagaagaactggacctgagtgggaatatc
attgcctatgttgagcctggagccttcaactcactctacagcctccacacactgagttta
aagagcaaccgcatcaagctcctctctttaggtgtcttctctggcctctccaacctgaca
aacctggatatcagcgacaacaaagttgtcattctggtggactatatgttccaagacctg
cgcaacctcaggtcattggaaattggagacaatgagctaatctatatctcccatcgggcc
ttcagtggactattgtcactggagagcctgacactggagcgctgtaacttgacggtggtg
cccacagatgccctgtcccacctgcacaacctggtgagcctacatatgcgctacctcagt
atcagcactcttcacccctactccttcaagaagctgttccaccttcgtcacctagaaatt
gacaactggccatctcttgatgcggtccctattaattcactgcatggcctcaacctcacc
acactttctattaccaacaccaacctgtccactttcccttaccaggctcttcgccacctg
ccttacctcacacaccttaacctctcctacagtcacattcgggtggtggagggtggcctg
cttaaggacttagtgcgattgcatgagctgaggttggctggatctcaactggtgtccatc
gaaccctatgctttccagggcatccgctggctccgtttgctaaatgtctcccaaaaccgc
cttgataccctggagaggggggtattccatgctcctgaggccctagaggtgctgttgatc
aacaacaatcctctggtgtgtgactgccgtctcatgtggttgctgcaaaggcgccattca
atttcttttggggacacccagcccgagtgcagcactccggaagggatccaaggacgcccc
ttcaaagagttcaaagagactctgctatcttactacgtgacctgcagcaagccgaagatc
cgagaaaatcgaactcagatggtgtccgtggaggagggacagtcggcccgattacactgc
agtgcagatggaaccccgaggcccactatttcctgggtcaccccacgccggagacacctg
actaccaggagccatggaagggtgacagttcacaacaacggctcgttggatatcaaggca
gcagaggttcaggatgacggtgtgtatatgtgtgtggcctctagcacagcaggcaatgac
actcttatggtatcactggcagtgaaaagtctgggctcgctgtatgccaacaggacccag
cattatacggatacaagcaatgccactgccaatggtaccaacctccccaatgtgaccttt
ggcctggacctaaaaactatcttagtttctacagccatgggctgtttcacattcctagga
gtggttctcttctgcttcctgctcctgtttgtatggagtcgaggaaaaggcaaacataaa
aacaacattgatattgagtacgtgccacgctcaaagtccaatgggacctccgctgaagag
gcagaccagggtgctgggccacgtcgatttaacatgaaaatgatttaa
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