Carassius gibelio (silver crucian carp): 128027608
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Entry
128027608 CDS
T08819
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04210
Apoptosis
cgib04218
Cellular senescence
cgib04620
Toll-like receptor signaling pathway
cgib04621
NOD-like receptor signaling pathway
cgib04622
RIG-I-like receptor signaling pathway
cgib04623
Cytosolic DNA-sensing pathway
cgib04625
C-type lectin receptor signaling pathway
cgib04920
Adipocytokine signaling pathway
cgib05132
Salmonella infection
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128027608
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
128027608
04218 Cellular senescence
128027608
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128027608
04621 NOD-like receptor signaling pathway
128027608
04622 RIG-I-like receptor signaling pathway
128027608
04623 Cytosolic DNA-sensing pathway
128027608
04625 C-type lectin receptor signaling pathway
128027608
09152 Endocrine system
04920 Adipocytokine signaling pathway
128027608
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128027608
09171 Infectious disease: bacterial
05132 Salmonella infection
128027608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128027608
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
128027608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
128027608
NCBI-ProteinID:
XP_052471332
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All DBs
Position
A14:complement(14956594..14990240)
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AA seq
934 aa
AA seq
DB search
MAGEDPYPGVYMEHIAPFHDDTMWMTMDPTPFPGIHNNNVMRTVDGPYLRIVEQPKQRGF
RFRYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGAARVVVQLVTHSAEIHLHAHSLVG
KQCDKGICIADLQSKDSSISFPNLGILHVTKKNVSKVLEERMIEAYRMGFNYGISIHPDI
DALQGEVRMPRELTDTERNLISSASIHQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVI
SDPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDESGVTWE
AYGDFSPTDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIID
KEEVQRKRQKTLPNFQDYSGAGGGAGGMFRGGGGGSTAGGGPSGGGGGHYFQGFQTYNNC
GTGYNFSSGMGGGGTTIKHAYQEPVEDSDEDSDGDTDNDPAAGGVVRICAHPDPVDLGVT
SEDTEPTENLELNTTGCVLEPHLAELAGRQAQALFHYAVSGDARMLLAPQRPLMTTQDEN
GDTSLHLGVIHSQTDAVRNLAQVISALPGEDILNIRNDLYQTPLHLAVLTLQKEAVEALL
EAEVDVTLTDRNGNTALHLAAQQKEGSMLRLLLKYKSVEQLTSIPNTAGLCPLHLAVQAN
SLSSVRALLDGGADVDIQEITCGRTALHLATELGNLSLAGCLLLEGNAYVDSITYNGSTP
LHIAAGRDSTKLCALLMAAGADPHKENFEPLFFKEDELCGTCEEEEEDEGFIPGTTPMNL
ATSPEVYDILNGEEYQLTTTVVPPQGDMKSLSSDTKQELCQALEGPTGGWESLAHALGLG
ILASAFRLSSCPAGKLLDSYEVSGGTVRELVEGLKHVGNSSAVSLLQAMCKEPEAVHTTP
QLTGPGLCKPIQGLTLGPHQEESGICDSGVETSF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggatccttacccaggagtgtacatggaacatattgcccctttccatgac
gatacaatgtggatgaccatggacccgacaccgttcccgggcatccacaacaataatgtt
atgaggacagtcgatggaccttatctgcgaattgtcgaacaaccaaaacagaggggcttc
aggttccggtatggatgtgagggcccctcccacggaggactcccaggggcctccagtgag
aagaacaggaagtcttacccacaagtgaagatctgtaactaccagggtgccgctcgagtg
gtagttcagctggtgacacactccgcagagatccatcttcatgctcacagcctggtgggc
aaacagtgcgataaaggaatctgcattgccgacttgcagtcaaaagattcaagcatcagt
tttcctaacttgggcattttgcacgtgacaaaaaagaacgtaagcaaagttttggaagag
aggatgatcgaggcctacaggatgggatttaactacggcatatccatccatcctgacatt
gatgccctacaaggagaggttcgcatgcccagagagctcacagatactgagaggaacctg
attagcagcgcatctattcatcagtcaaaggagatggatctgagcgtggtgcggctcatg
ttcacagccttcctgcccgacagtgatggaggcttctcccgcagactggaaccggtcatt
tcagaccccatctttgacagcaaggccccaaatgcctccaatctgaagatagtgcggatg
gatcggaccgccggctgtgtgactggaggagaggaggtctatctgctgtgtgacaaagtc
cagaaagatgatatccaggtgcggttttatgaagaagatgagtcaggtgtaacctgggag
gcctacggggatttctcccccaccgatgtccacagacagtttgccatcgtcttcaagacg
cctaaatatcgggaccagaacctccagaagcccatctctgtgtttgtgcagctgaaaagg
aagtcagacaatgaaacgagtgaacccaagcctttcacctaccatccacagattatagac
aaagaagaagtccaaagaaagagacagaagacactgccaaactttcaggactacagtggt
gcaggaggcggagctgggggcatgtttagaggaggagggggtgggtctacagcagggggc
ggtcccagtggaggaggaggaggacattacttccagggatttcaaacctataacaattgc
gggactggatataacttctcctcaggcatgggaggaggcgggaccaccatcaagcatgca
tatcaagaaccagtggaagacagtgatgaagacagtgatggtgataccgataatgatccg
gcagcaggtggggtggtgcgaatctgtgcccatcctgatccagttgatttgggagtgaca
agtgaggacacagagcctacagaaaatctggagttaaacaccacaggctgtgtgttagag
ccgcatttggctgagctagctggaagacaggctcaagctctctttcattacgcagttagc
ggtgatgctagaatgcttctggctccacagcgccccctcatgaccactcaagacgagaac
ggagacacgagtttacatctgggagtgatccatagtcagacagatgccgtgcgaaatcta
gcacaagtcatctcggctctccctggagaggacatactcaacattaggaatgatctgtac
cagactcctttgcacctagcagtgttgacactgcaaaaagaggcggtcgaggccttgttg
gaggccgaggtggatgtcacgctcacagatcgcaatggaaacacggcacttcacctggcg
gctcagcagaaagagggtagcatgctgcgattgctgctaaagtacaaatcagtggagcaa
ttaaccagcatccccaacacagcaggtctctgtccgcttcacctggctgtacaggcaaac
agtttgagtagtgtgcgagccctgctggatggcggggcagatgtggacatccaggagatc
acatgtggccgcacagcacttcatctggctacagagctgggaaacctttccctcgccggc
tgccttctgctggagggtaatgcatatgtagacagcatcacttacaatggttcgactcct
ctgcacattgctgcgggacgtgactcaaccaaactgtgcgcgctcttgatggctgccgga
gcagatcctcataaagaaaactttgaaccactgttcttcaaagaagatgagttgtgtggt
acatgtgaggaggaggaggaagatgaaggctttattcctgggacaacccctatgaacttg
gcaacctccccagaggtgtatgatattcttaatggagaagagtatcagctcaccaccact
gttgttccaccacaaggtgacatgaagagcttgagctctgacacaaagcaggagctgtgc
caggccctggaaggaccgacgggaggctgggagagtctggctcatgctctgggactgggc
atcctggccagtgccttcagactcagctcctgccctgctggaaagctgctggacagctat
gaggtgtctggaggaacggtgcgtgagctggttgagggactgaagcatgttgggaacagc
agtgctgtcagtttactccaggccatgtgcaaggagcctgaagcggttcacaccacgcct
cagctcacaggtccagggctctgtaagcccattcagggattgacactgggcccccatcag
gaagagagtgggatatgtgacagcggggtggagacctctttctag
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