Carassius gibelio (silver crucian carp): 128027625
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Entry
128027625 CDS
T08819
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03015
mRNA surveillance pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128027625
09122 Translation
03013 Nucleocytoplasmic transport
128027625
03015 mRNA surveillance pathway
128027625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128027625
03041 Spliceosome [BR:
cgib03041
]
128027625
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
128027625
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
Cap binding complex
128027625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
AAA_11
GBP_C
Vfa1
MG280
EMC3_TMCO1
FapA
Exonuc_VII_L
PIN_8
DUF1690
tRNA_bind_2
DUF4407
DUF1664
Barstar
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
128027625
NCBI-ProteinID:
XP_052471355
LinkDB
All DBs
Position
A14:15429917..15442229
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AA seq
797 aa
AA seq
DB search
MSRRRHSDEGDAGSQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEA
DLPNYKGKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKSN
LYSEALYSVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDIPQVRSDWYVYAVLSSLPW
VGKELYEKKDVEMDRLFNQIEGYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQVQKL
KKDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHSDDAVYPMPHVVFRMFDYTDAPE
GPVMPGSHSVERFVIEENLHCIIKSHWRERKTCAAQLLSYPGRNKIPLNYHIVEVIFGEL
FQLPSPPHIDVMYTALLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTTCIDRLLNWFSH
HLSNFQFRWSWDDWADCLTQDIEKPKPKFVKEVLEKCMRLSYHQRIVDIVPPSFSALIPA
NPVCSYKYEEETEIPLPGLAMATTVSNAIKNRASNEEILIVLKDVPNPNQDDDDDEGDGF
NPLKIEVFLQTLLHLAAKSFSHSFSALAKFHEVLKNLTESDEGKLHILRVLYEFWRNHPQ
MISVLVDKLIRTQIVDCAAVANWIFSPEMAHDFTRFYVWEILHSTIRKMNKHVQKIQKEL
DEAKEKLEKQQNKKQRDSGDEEDMEKNSEDEEGQLEEQIERLQEKVESAQSEQKNLFLVI
FQRFIMLLTEHLVRCETSGIDINTSWYKNCIERLQQIFLMHHVIIQQYVGTLENLLFTAE
LDHHILAVYQQFCALQL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcgaaggcacagcgatgagggtgatgccgggtcccagcctcacaaacggagg
aggacgtctgaacccatcgagattgaagaccgcctagagtcactgatatgtcgagtggga
gagaagagtacatcctccttagagagcaatttggagggtcttgctggtgtcctggaggcg
gatcttcctaattataaaggcaaaatcctgcgcatcttatgtgctgttgcaaggcttttg
ccggagaagttgacggtgtacacaacactagtgggacttctcaacgctcgcaactacaac
tttggaggagagtttgtggaggccatgatccgacaacttaaggagacactaaaatcaaac
ctttactctgaggccctttactcggtgcgctttctcagtgacctggtgaactgtcatgtc
atcgcggctccatccatggttgctatgtttgagaactttgtcagtgtcacacaggaagaa
gacataccacaggtgcggtctgactggtatgtgtatgctgtgctgtccagtctgccttgg
gttggcaaggaactgtacgagaagaaggatgtggaaatggatcgcttgttcaaccaaatt
gagggatatttaaagcggcgtcagaagactcatgttcctatgctgcaggtgtggactgca
gaaaagccacacccacaggaagagtatctggactgtctctgggctcaggtgcagaagctg
aagaaggaccgctggcaggagcgtcacattctgcggccttatattgcgtttgatagtgtg
ctgtgtgaagccctgcaacacaacctaccccctttcacacctccagcccactctgatgac
gctgtttaccctatgccccatgtcgtcttcagaatgttcgactacactgatgcccctgag
gggccagtgatgccaggaagtcattcagtcgagcgctttgtgattgaggagaaccttcac
tgcatcatcaagtctcactggagggagaggaagacctgtgctgcccaattgctcagctac
cctggaagaaacaagattccccttaactaccatattgtggaggtgatatttggcgagtta
ttccagctgcccagtcctcctcacattgatgtcatgtacactgcgttactcattgagctc
tgtaaactgcaaccgggctcattaccacaagttctcgctcaagccacagaaatgatgtat
atgaggctggacacaatgaacacaacctgtatagaccgactcctcaactggttctcgcat
catttgagtaacttccagttcagatggagctgggatgactgggctgactgcctgactcaa
gacattgaaaagcccaaacccaagttcgttaaagaggttttggaaaagtgtatgaggttg
tcataccatcagcggatagtggacattgttcctccgagtttctctgccctgatcccggct
aaccctgtgtgcagctataaatatgaagaggagaccgagattccattgccaggattagct
atggcaactacagtgagtaacgctattaaaaaccgggcgtctaatgaggagattcttatt
gttctaaaagatgtccctaatccaaaccaggatgatgatgatgatgagggcgatggcttt
aaccctctgaagattgaagtgttcctgcagacactgcttcatttggctgctaagtctttc
agtcattccttcagtgccctggccaagttccatgaggttctgaaaaaccttacagaaagt
gatgaggggaaactgcacatcctcagggtcctgtatgagttctggaggaaccatcctcag
atgatctccgtgttggtggacaagttgatacggacccagatcgtggactgtgcagctgtg
gccaactggatattttctcctgaaatggctcatgatttcaccaggttttatgtgtgggag
attctccattcgaccatccggaagatgaacaaacacgtgcagaaaatccagaaagagttg
gatgaggcaaaagaaaagctggagaagcaacagaacaaaaagcagcgggacagtggcgat
gaagaggacatggagaagaacagtgaggatgaggagggtcagttggaggaacagatcgag
aggctgcaggagaaagtcgagtcggcccagagcgaacagaagaaccttttccttgttata
ttccagcgcttcattatgttactgacagagcacctggttcgctgtgaaacgagtggcata
gacatcaatacctcctggtacaagaactgcattgagaggctacagcagatcttcctcatg
catcatgtgatcatccagcagtatgtggggaccctggagaacctgctgttcaccgctgag
ctcgaccatcatatcctggctgtttaccagcagttctgtgctcttcagctttaa
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