Carassius gibelio (silver crucian carp): 128027637
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Entry
128027637 CDS
T08819
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib02010
ABC transporters
cgib04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128027637
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128027637
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
128027637
Transporters [BR:
cgib02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128027637
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
128027637
NCBI-ProteinID:
XP_052471367
LinkDB
All DBs
Position
A14:15715834..15746231
Genome browser
AA seq
2282 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILITVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGIVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELIGALKVMQNNTAGFKLKDFLHENETLSTFLQQNASFSHNYVQNVLDADVNLE
KVLIKGFGVHLRDMCSSTTLEDFVSISDERVARFTQDLICSSPNSWLDQAERHFKSNLDF
LKPVRSNTRTNATDVRLVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLTENATGSP
SLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSHNDSDDEPVSVYDNTTTPYCN
NFMKNMEASPISRMIWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGILRDLGGMW
EEARPKVWNFMENSEEMDLMRTLLRNNATASFFSAQLAGTQWSVEDAISFLSKHSEDTRP
HGTAFTWRDIFNETDQAIMSISRFMECVNLDKLEPVSTEEKLVKESMGLLDNRKFWAGIV
FLDVQSNSSELPPHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFTYLQ
DVVEHGIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVLLLKMGNLLPYSDPGI
VFLFLGSFAVVTIMQCFLISTVFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSAKI
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPVEEDNYNLTTCLILMYFDAFLYGV
MTWYIETVFPGQYGIPRPWYFPFTKSYWFGESNTNKTAVHGKKSNAGAVCTEEEPIHLEL
GVYIKNLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGKDIRSELSSIRRSLGVCPQHNVLFSMLTVEEHIWFYGRLKGLSEEEVKAETEQILT
DTGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RAGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKTQLGTGYYLTLVKKNTEPS
LSSCRNSGSNVSFVKKDDNASENSSDAGLGSDQESEAATAIGTTWPESPVIPVDVALISS
LILKHVPAARMVEDLGHEITYVLPYESAKDGAFVELFHDLDDRLADLCISSYGVSDTTLE
EIFLKVAEDSGVDTEIISDGTVPVRRHRQHAFGVDHQSCLKPLTEDDNFDGNDSYGDPES
KETDYLSVSNGKGSYQVKGWSLKRQQFVALLWKRLLYARRSTKGFFAQIVLPAVFVCIAL
VFSLIVPPFGKYPSLALNPWMYEEQFTFISDDAPHDTSTQKLLNALLDDPGFGTRCMEGE
PIPDAPCTMGDEEWSSPEVAESMMDIFTSKNWTMDNPSPACECSCNGKKKMLPECPAGAG
GLPPPQIKISEIETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARST
QVLPPAEEIDDAISRVRDIFQLGKDSGSATDRFLKSLSAFINGLDTKNNVKIWFNNKGWH
SIGAFLNVMNNGIFRASLPPGKDPRQFGITTFNHPLNLTKEQLSQVALMTTSVDVLVSIC
VIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPLLYWLANFLWDMCNYVVPATLVIVI
FVCFQQKAYVSTSNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGIN
GSVATFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENSF
RSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFEAKSLRAKLSPIGEEDEDVARERQ
RIMSGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLT
GDSVVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKE
VCEVAEWGINKLGLVKYMDKKAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKAR
RALWNCIHSVIKEGRSVLLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYT
IILRVAGPNPDLQPVMKFIESELPGSTLKEKHRNMLQYQLPSSLTSLAHIFSILAKNKEF
LRIEDYSVSQTTLDQVFVNFAKDQSDDHSESSIRRKETAVNMALLSPLSIKGNTEKPMES
FV
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctccactcagctgggtctgctgctgtggaagaacttcacctacagaaggaga
caaacgctccaactgctgacggagattgtgtggcctctctttattttcttcatcctgatc
actgtgaggttgaactacccgccttatgagcaacatgaatgtcactttcccaacaaagcc
atgccctcagcaggcaccctgccctggatccagggcatcgtctgcaatgccaacaatccc
tgcttccgacacccaacccctggggaatctccaggaatcgttggaaactttaatgattcc
ataatctcacgtctgttttctgatgccaagaaaatcttactgtacagtcaaaatgacaaa
agcttagacggattcaaggagctaatcggtgcactaaaagtcatgcaaaataacacagct
ggtttcaagctgaaggacttcctgcatgaaaatgaaaccctttctacgttcctccaacaa
aacgcctccttttcccataattatgtacagaatgtgctggacgcggatgtaaatcttgaa
aaggtgctgatcaaaggttttggcgtccatctgagggacatgtgcagctccaccacactt
gaggattttgtgagcatatcagacgaaagggtggcaagattcacccaggaccttatctgc
agctctcccaatagctggctagaccaggccgagagacacttcaagtccaacttggatttc
ctcaaacctgttaggtcaaacacaaggactaatgccactgatgtccgtctagttgccaaa
gccacagacaaccttctggagagcctgggatcactggctgtggagctggccagtatgagg
agctggagtgacctgcgaaacgaaatcttgtttctgacagaaaacgccaccggctcaccg
agtctgatgtaccaggctgtgtcccgaatcgtgtgtggacatccagaaggcggcggcctc
aagatcaaatccctcaactggtacgaggacagcaacttccaggcactgttcggcagccac
aacgacagtgatgacgaacccgtttcagtctatgacaacaccaccactccgtactgtaac
aacttcatgaagaacatggaagccagtcccatctctcgaatgatctggagagcattgaaa
cctctcctgatggggaagatcctctacacgccacacagccctgcaacacagaagatcatt
catgaggtcaacaagacgtttcaggagctcggaattctacgagatttaggaggaatgtgg
gaagaagccagaccgaaggtttggaatttcatggagaacagtgaagaaatggatctgatg
cggacgcttcttcgaaacaatgccactgctagttttttcagtgcccagttggctgggact
cagtggagcgtggaggatgctataagcttcttgtccaagcactccgaggacacgcgtccc
catggaacagcgtttacatggcgggacatcttcaatgagacggaccaggccataatgagc
atatcccgtttcatggagtgtgtaaacctggataaacttgaacctgttagcacagaggaa
aaactggtgaaagagtccatgggcctcctggataacagaaagttttgggcgggaattgtg
tttctggacgttcagtccaacagctctgaacttcccccgcatgtcaattacaagatccgc
atggacattgacaacgtggagcgcacaaacaagattaaagatgggtattgggatcccggt
cccagggctgatccgtttgaggatttgcggtatatttggggaggatttacttaccttcag
gatgtagttgaacacggcatcatcagagcggttaccgggaccaaagagaagaccggtgtt
tacatccaacagatgccttatccatgttacgtagatgatattttccttcgcattatgagc
cgttccatgccgcttttcatgactctggcctggatgtactcggtggccatcatcatcaaa
ggtgttgtctatgaaaaggaggcccggctaaaagagaccatgaggattatgggattggac
aatggaatcctgtggttcagctggttcattagcagcctcatccctcttctcgtcagcgca
ggcctgctggttctgctactcaagatgggtaatctcctgccctatagtgaccccggcata
gtcttcctcttcctcgggtcattcgccgtggtcaccatcatgcagtgtttcctgatcagt
acagtgtttgcacgtgccaacctggcagcggcttgtgggggcattatctactttaccctc
tacttgccttatgtgctctgtgtggcttggcaagactacgtgggcttcagcgccaaaatc
attgctagcttactgtctccagtggcgtttggatttggctgtgagtattttgccttgttt
gaggagcaaggtgtgggcatccaatggaataacctcttctctagccccgtggaagaagac
aactataacctcaccacctgcctcatccttatgtactttgatgccttcctgtatggggtc
atgacgtggtacattgagaccgtgttcccgggccagtatggcattcccaggccatggtac
ttccctttcactaaatcctactggtttggagagagcaacacaaacaaaactgcagttcat
ggaaagaagagcaatgctggggccgtatgcactgaagaggaacccattcaccttgaattg
ggagtttacattaagaatcttgtgaaggtctaccgtcatggcaaaaaactagcagtcgat
ggcttgacacttggattctatgaggggcaaataacttctttcctaggtcacaatggagct
ggaaaaaccaccaccatgtctatcctaacgggccttttccctcccacttctggcactgca
tatataatgggcaaagatattcgctcagagctcagttcgatcagacggagccttggagtg
tgtccacaacacaacgtgctcttcagcatgttgacagtagaagagcacatctggttctac
ggccgtctgaagggtctgtctgaggaggaagtgaaggctgagacagagcagattctgact
gataccggccttccacacaaacgcaaatccaggaccagccaactgtccggtggtatgcag
aggaaactctcggtagcccttgcttttgttggagggtcaaaggttgttattctggacgag
cccaccgctggtgtggacccatacgctagaagaggcatctgggatcttcttctgaagtat
cgtgcaggtcggactatcattctttccacccatcatatggatgaagcagatattctgggt
gatcgtattgctatcatctcccatggaaagctttgttgtgtgggatcttcgctctatctt
aaaactcaactgggaactggatactatcttaccttggtgaagaaaaacactgagccttct
ctcagttcttgcaggaactcaggcagcaatgtgtcctttgttaaaaaagatgacaatgcg
tccgagaacagttcggatgctggtctaggaagcgaccaagagagcgaagccgccacagcg
attggaactacatggcccgaatctcccgttattcctgtcgatgtagccctcatctccagt
ctaatcctgaagcatgttcccgctgcccgtatggtggaagaccttggtcatgagatcaca
tatgtgttgccgtacgagtctgccaaagatggtgcattcgttgagctcttccatgacctg
gatgatcgcctcgctgacctctgcatttcaagctatggcgtctcagatactacacttgaa
gagatattccttaaagtggcagaggacagtggagttgacacagaaataatttctgatgga
actgtaccagtgcgcagacatagacagcacgcatttggtgttgaccaccagagctgcctc
aaacccctaactgaagatgataactttgacggcaacgactcttacggtgatccagaatcg
aaagagacagactatttgagcgtttccaatgggaaaggatcatatcaggttaaaggttgg
agtttgaagaggcaacagtttgtggccttgttgtggaagagattgctgtatgctcggcgc
tcaacgaaaggcttctttgcacagattgttcttcccgctgtgtttgtgtgcatcgcgctg
gtgttcagtcttattgtgccgccattcggaaaatatcccagcctggctcttaatccatgg
atgtatgaagaacagtttacgttcatcagtgatgatgctccacatgatacaagcacacaa
aaattactcaatgctttgttagatgatcctggctttggaacacgatgcatggaaggagaa
ccaattcctgatgctccctgtacaatgggcgatgaggaatggtctagtccagaagtggca
gaaagcatgatggacattttcacatcaaaaaactggaccatggacaacccatcgcccgct
tgtgagtgcagctgtaatggcaaaaagaagatgctcccagaatgccctgctggtgcaggt
ggactgccacctcctcagattaagatcagtgagattgagaccctccagaacctgacggga
cgaaacatctcagactatctagtgaagacctatgcacagatcattgggaaaagcttaaag
aacaagatatgggtgaatgaattcagatatggaggattttcattgggcgctagaagcact
caggtacttcctcctgctgaggagattgatgatgccatctccagagtcagggacatcttc
caactggggaaggactccggatcagcgaccgaccgtttcttgaaaagcctgtctgccttc
atcaatggactggacaccaagaacaatgtcaagatatggttcaataacaagggctggcac
agtattggagctttcctcaatgtaatgaacaatggtatctttcgtgccagcttaccacct
ggcaaagacccgcgtcagtttggcatcactacattcaaccatccactcaatctgaccaag
gaacagctttctcaagtggccctaatgactacctcagtggatgtgctggtttccatctgt
gtgatcttcgccatgtcctttgtccccgccagctttgttgtctttctcattcaggagcga
gtcaataaggccaagcacatgcagtttatcagtggagttcagccattgctctactggctg
gccaactttctctgggatatgtgcaattatgtcgtccctgctactctggtgatcgtgatc
tttgtgtgctttcaacaaaaagcctatgtctccaccagcaacctgcctgttcttgccctt
ctactgcttctttatggatggtccatcactcctcttatgtacccagcttcattcctcttc
aaaatccctagcactgcttatgtggttctcactagcgtcaacatcctcattgggatcaac
ggcagcgtggccacttttgtcatggagttatttggaaataatgagatcggtggcattaat
gacatcctgaagaacgttttgctcatctttccacatttctgccttggccgaggtctcatc
gacatggtgaagaatcaggccatggctgacgctctggagagatttggtgaaaacagtttc
cgttctccattggagtgggacatggtgggcaagaatctttttgccatggctgtggaagga
gtggttttcttcatcatcacagtccttatccagtatcgtttcttctttgaagccaagtct
ttaagagccaagttgagtccgattggagaggaggatgaggatgtggccagagagaggcag
agaatcatgagtggagctggacagggagacattcttgaactccgacagctcactaaggtg
tacaagcggaaacagaagcctgctgttgatcgtctatgtgttggtattcctccaggagag
tgctttggtctgcttggtgtaaatggagctggaaagaccagtacttttaaaatgctgacc
ggagactctgtggtcaccaaaggagaagcattcttggctgggaaaagtatactcagagaa
atagatgaagtacatcagaacatgggctactgccctcagtttgatgccatcaacgatctg
ctgacaggacgagaacacctggaattctacgccatcctgcgtggtgtacctgagaaggaa
gtttgcgaggtggcagagtggggaatcaataaactgggcctcgtaaagtacatggacaag
aaagcaggaagctacagcggtggcaacatgcgcaaactctccaccgccatatcactcatt
ggagccccaccagtggtcttcctggacgagcccaccactggaatggaccccaaagcacgc
cgagcattgtggaactgcatccacagtgtcatcaaagagggacgctctgtcctacttacc
tcacacagcatggaagaatgtgaagcgctgtgcaccaggatggccatcatggtgaacggc
aggttccgctgtctgggcagcgtccagcacctgaagaacagatttggagatgggtacacc
atcattctgagggttgcgggcccaaatcctgacctgcagccggtgatgaagttcattgag
agcgagctgccgggaagcaccctgaaagaaaaacaccgaaacatgctgcaataccagctc
ccctcctccctcacctccctcgctcacatcttcagcatcctcgctaagaacaaagagttt
ctcaggatagaggactactccgtgtcccagaccactctggaccaggtatttgttaacttt
gccaaggaccaaagtgacgaccactcagagagctccattcgtcggaaagagacagcggtc
aacatggccctcctgagccctctctctattaaagggaacacggagaagccaatggaaagc
tttgtgtga
DBGET
integrated database retrieval system
