Carassius gibelio (silver crucian carp): 128027677
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Entry
128027677 CDS
T08819
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128027677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
128027677
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
128027677
Prokaryotic type
Archaeal type
TFB
128027677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
128027677
NCBI-ProteinID:
XP_052471446
LinkDB
All DBs
Position
A2:15118172..15123954
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AA seq
316 aa
AA seq
DB search
MASTSRGDYIPKVQCPNHPEAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKE
TKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaccagccgtggagactatattcccaaggtgcaatgccccaatcaccccgaa
gcaatactggtggaggactacagggcaggagacatgatctgtcctgaatgtggccttgta
gtaggtgaccgtgtaattgatgtagggtcagagtggagaacgttcaccaatgagaaagaa
actaaagacccgtctcgtgttggagacgctcagaatcctcttctcaatggaggagacctc
actaccatgatcagcaaaggaacaggtgcagcaagctttgatgagtttggaaattccaag
taccagaaccggagaaccatgagcagctctgatcgagccatgttgaatgccttcaaagag
atcaccaccatggccgaccggatcaacctccccagaaacatcattgaccgaacaaacaac
ttgttcaaacaggtttatgaacaaaagagtctgaaaggcagaagtaatgatgcgatcgct
tcggcctgcctttacatagcttgcagacaggagggcgtccctagaacatttaaagaaatc
tgtgccgtgtctcggatctcgaagaaggagattggccggtgcttcaagcttatcctgaag
gctcttgagacgagcgtggacctcatcacaaccggcgacttcatgtcccgtttctgctcc
aacttgggcttgcccaaacaggtgcagatggcggccacttacatcgccaggaaggctgtt
gaactagacttggttccagggcgcagtccgatctcggtggcagctgcagccatttacatg
gcctctcaagcgtctgccgagaagaagacacagaaggagattggggacattgctggagtg
gcagacgtcaccatccgtcagtcctaccgtctcatctatccccgcgcagccgatctcttt
cctgcagacttcaagtttgacacaccggtggataaactgcctcagctgtga
DBGET
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