Carassius gibelio (silver crucian carp): 128027682
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Entry
128027682 CDS
T08819
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128027682
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgib01007
]
128027682
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
128027682
Enzymes [BR:
cgib01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
128027682
Amino acid related enzymes [BR:
cgib01007
]
Aminoacyl-tRNA synthetase
Class II (A)
128027682
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128027682
Prokaryotic type
128027682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2d
XH
Motif
Other DBs
NCBI-GeneID:
128027682
NCBI-ProteinID:
XP_052471451
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All DBs
Position
A14:16073225..16081916
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AA seq
515 aa
AA seq
DB search
MADKVQLQEAIKTQGEVVRKLKSEKASKEQIDEEVARLLQLKAQLGGDEGKHVFVLKTAK
GTRDYNPKQMAIREKVFNIIISCFKRHGAETIDTPVFELKETLTGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG
QYDAMIPDAECLKIVYEILNELDLGDFRIKVNDRRILDGLFAVCGVPDEKFRTICSTVDK
LDKMAWEDVKKEMVNEKGLSVDVADRIGEYVSMQGGQDLAERLLQDPRLSQSKQACAGLT
DMKLLFSYLELFQVTDKVVFDLSLARGLDYYTGVIYEAILSQTIQAPVSTPAEQNGADEA
GVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAEASSEKVRTTETQ
VLVASAQKNLLEERLRLTNELWNAGIKAEVLYKKNPKLLSQLQHCEETGIPLVAILGEQE
LKDGVVKLRNVASREEVDVPRVDLVDEIKKRTLLS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaagtacagctacaggaggcgattaaaacacaaggagaggtcgtcaggaaa
ctgaaatcagagaaagcgagtaaagaacagattgatgaagaagtggccagactgttgcag
ctcaaagctcagctgggaggagatgagggaaaacatgtgtttgttctcaaaacagccaag
gggaccagggactataaccccaagcagatggctatcagagaaaaggttttcaacatcatc
atcagctgctttaaacgccatggtgctgaaaccatcgatacccccgtctttgagctgaag
gaaacattgacagggaagtacggtgaagactccaagctcatctacgatctgaaggaccag
ggaggagaacttctgtctctgagatatgacctcactgtcccatttgctcgctatctcgca
atgaataaaatcaccaacattaagcgctaccacattgctaaagtgtaccgcagagacaac
ccagccatgacccggggccgttacagggagttctaccagtgtgatttcgatattgcaggt
cagtacgatgccatgatccctgatgccgagtgtctgaagattgtctacgagatcctgaac
gaattagatctaggagattttcgtattaaggtgaatgaccgacgcattctagatggattg
tttgctgtgtgcggcgttcctgacgagaagttccgcacgatctgctccacagtggacaaa
ctggacaagatggcctgggaggatgtaaaaaaggagatggtgaatgagaaagggctttca
gtggatgtggctgatcggatcggggagtatgtcagcatgcaaggaggacaggatctggcc
gagcggctgcttcaggaccccagactgtcccagagcaagcaggcctgcgctggactcacc
gatatgaagctgctctttagctacctggagctcttccaggtcacagacaaggtggtgttt
gatttgagtctggctcgaggactggactactacactggtgtgatttatgaagcgattctc
tcccagaccatccaggcaccggtgtccacgcctgcagagcagaacggggcagatgaagct
ggcgtaagcgttggcagtgtggccggtggagggcgatatgatggtctggtgggcatgttt
gaccccaagggcaggaaagtgccctgtgtgggcgtcagcattgggattgagaggatcttt
tccatcatggagcagaaggccgaggcatcttcagagaaggtgcgcaccactgaaactcaa
gtactggtggcctcggcacagaagaaccttctagaagagcgacttagactgaccaatgaa
ctttggaatgctggaatcaaggctgaagttttatataagaaaaacccaaagctgttgagt
caactgcagcactgtgaggaaactgggattccactggtggccattttaggagaacaagaa
ctcaaagacggagttgtcaaactgcgcaacgtagccagccgagaagaggttgatgtgccc
agagtggatctggtggatgagatcaagaaacggaccttgttgtcttaa
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