Carassius gibelio (silver crucian carp): 128027686
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Entry
128027686 CDS
T08819
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04080
Neuroactive ligand-receptor interaction
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128027686
04082 Neuroactive ligand signaling
128027686
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128027686
Ion channels [BR:
cgib04040
]
Ligand-gated channels
GABA-A
128027686
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Zip
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
128027686
NCBI-ProteinID:
XP_052471455
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Position
A14:17330036..17365503
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AA seq
553 aa
AA seq
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MVSAKKEMVTAMYPTSIPTLLYFLCVAACIKRISGQIRKDEKLYPENFTRILDRLLDRYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLKYDGPVEILRLN
NLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMKNGTILYTMRLTIIAECPMRLVDFP
MDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETVKSIT
GEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYLTNVQAERAKRKQAAAAA
KSSTRSGKAKDTEEVLQQNSDTNGNLRKRVTSNVQSQPDSKKTQRTEKSSKSGAATSKPT
LTSQSSFTSEGTSSFSSQSRLSPSSASQSNAATSSSASKTTLPAPPSTPTVPEKPSPAAT
PGAAPLHHLLGPKLENIKKKETKPAPQPATPPAGGASKIDEYARILFPVSFGAFNMVYWV
VYLSKDTMEAKGG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtgactgcgatgtaccctacttctattcccactctc
ctctactttctgtgtgtggcggcttgcataaagagaatatctggacagatcagaaaggat
gagaaattatacccggaaaatttcacacgcattctggaccgacttctggacagatacgac
aacaggctccgacctggatttgggggtccagtgacggaagtgaagacagatatttatgtc
acaagtttcggcccagtttctgatgtggagatggagtacaccatggacgtgtttttccgc
cagacatgggtggataggcggttgaagtatgatggcccggtcgagatcctccggctaaat
aacctgatggtgaccaaagtttggaccccagacactttcttcaggaacggcaaaagatct
gtggctcacaacatgacggcacccaacagactcttccgaatcatgaagaacggcaccatc
ctgtacactatgaggttgacaataattgcagaatgtccaatgaggctcgttgatttcccg
atggatggccactcctgccctctgaagtttggcagctatgcctacccaaagactgagatg
atctacacctggaccaaaggcccgcagcattctgtggaggtcccacctgagtcgtccagc
ctggtacagtacgacctgatcggacagactgtgtcaagcgagactgtaaaatctatcaca
ggtgaatatgtggtaatgacggtctacttccatttgaaacggaaaatgggctacttcatg
attcagacatacatcccctgcatcatgactgtaatcctttctcaagtgtctttctggata
aataaggaatccgtgcccgccagaactgtctttggtatcaccactgttctcacaatgacg
accctcagcatcagcgctcggcactctctgcccaaggtctcgtatgccactgccatggat
tggttcatcgctgtgtgtttcgctttcgttttctctgctctcatcgagtttgcagctgtg
aactacctcaccaacgttcaggcagagagagccaagagaaaacaggccgcagccgccgcc
aagagctccacacggtcaggcaaagctaaagacacagaggaggttctacagcaaaactca
gatactaatggcaacctgcggaaacgtgtcacctccaatgttcagtctcaaccagactct
aagaagacccaaagaaccgaaaagtctagcaagagcggagcagccacatccaaaccgacc
ttgaccagccaatcatccttcacctcagagggcaccagcagtttttccagccaatcacgt
ctcagccccagttctgccagccaatcaaatgcagccacttcatcctctgcgtccaagaca
acactgcctgccccgccctctacgccaacagttccagagaaaccatcgcccgctgcaact
ccgggcgccgcacctcttcatcatctcctggggcctaaattagagaatattaaaaagaaa
gaaaccaagcctgcacctcaacctgccactcctccagccggaggagccagcaagatcgat
gaatatgcacgtattttattcccagtgtcctttggggcattcaacatggtgtactgggtg
gtttacttatccaaagacaccatggaggcaaaaggaggctaa
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