Carassius gibelio (silver crucian carp): 128027771
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Entry
128027771 CDS
T08819
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128027771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128027771
03012 Translation factors [BR:
cgib03012
]
128027771
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128027771
Translation factors [BR:
cgib03012
]
Eukaryotic type
Release factors
128027771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
128027771
NCBI-ProteinID:
XP_052471593
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All DBs
Position
A14:complement(19431398..19443238)
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AA seq
443 aa
AA seq
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MADDPNAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPHNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGNGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQFYVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAAEILIVYENLETMRYVLKLHGAEVNGAENDEKIIYLTPEQEKDK
SHFIDKETGQEHELIECMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMDYPEEDEEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatcctaacgcggcggacagaaacgtggagatctggaagatcaagaaactc
atcaagagtctggaagcggcgagaggtaatgggaccagcatgatctcgctcatcattcct
cctaaagatcagatctccagagtggccaagatgttggctgatgagttcggtacagcgtca
aacatcaagagtcgagtgaaccggctctcagtgctgggagccattacttcagtgcagcag
agactcaaactctataataaagtgccccataacggtctggtggtttactgtggcaccata
gtgacagacgaaggcaaagagaagaaagtcaacatcgactttgagccgtttaaacccatc
aacacctctctgtacctctgtgataacaagttccacaccgaggctctgacggcgttattg
tcagacgacagtaagtttggattcatagtcattgatggtaatggagctctgttcgggact
ctacagggaaacaccagagaagtgctgcacaaattcactgtggacctgcccaaaaaacac
ggaagaggaggtcagtctgcgctgcgtttcgctcggttacggatggagaagagacataat
tacgtgaggaaggtggcagagacggctgtgcagttttacgtatctaatgataaggtcaac
gtggccggactggtgctggccggatctgcagatttcaaaaccgagctcagccagtcagac
atgtttgacccgaggttgcaggcgaaagtgttgaagctggtcgacatctcttacggagga
gaaaacggcttcaatcaggccatcgaactgtctgctgaggtcctgtccaacgtcaaattc
atacaggagaaaaaattaatagggcgatacttcgatgagatcagtcaggacacagggaag
tattgtttcggtgtggatgacaccctgaaggcactggaaatgggagccgcagaaattctc
attgtctatgaaaacttagagacgatgagatacgtcctgaaattgcacggcgcagaggtc
aacggcgcggagaacgatgagaaaatcatttatttgaccccagagcaagagaaggacaaa
tcgcacttcattgacaaagagacgggacaggaacacgagctcatcgagtgcatgccgctg
ctggagtggtttgccaacagctataagaagtttggagcgactctggagatcgtgacggat
aaaagtcaagagggatcgcagttcgtcaagggtttcggaggaattggaggtattttgcgg
taccgagtggatttccaggggatggactacccagaagaagatgaggagttttttgatttg
gatgactactag
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