Carassius gibelio (silver crucian carp): 128028659
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Entry
128028659 CDS
T08819
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128028659
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
128028659
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Holin_BhlA
DUF4446
Motif
Other DBs
NCBI-GeneID:
128028659
NCBI-ProteinID:
XP_052471896
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Position
A2:complement(16319865..16357167)
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AA seq
928 aa
AA seq
DB search
MRHRHAGAVHQQHSNDADARDSQKEGSHPVAALFSLPPPPPSIKERSTSSHHSQHVQSCP
DRGTRNGECVPLTGHCSLAHADRAPYDNQPHPFPGASSGYQCHSEGLSQSSHSPQHRSSV
SPQPSPSDLLPSPLPSHISNTRDTRQKSANYKQDILQRRTEEGGRRDQNQLLRQPYYNQQ
KDPSFELLLPNSCQGQINAREEAEKERQVIEPQAQLLLGSSLPVTYCISGSGQVFRNKQA
PLLQHQHQHQHQQGRAQEHSLQRQQSDRDSSGYQEGEIVLCQPYQCERALERNSSVSSSD
NSSPPYGSSSQLWPEPHDEQDRRNRASKHKAHAERTKLSHAGSKPSLSESSHSLPQIAMN
SCKYNGGVVRPLGSLAASRRNLAEHDSETQPLQTLHSSGLEVVVSKGSGEDPSKASNESL
VRESGNAPQKKNKDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTK
ESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELL
VCAIHPIPGQYVFTWTARLAFTYVPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTD
ASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVT
SNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKA
EKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHHA
VQWLTCCVYVVVSKLELCFVFILLYHCRAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMY
DLVSELQERSEELDKRIGTLEDKLDAVTGSLQALPCLISQAITQQQQDLLDGFVHRFCPA
SLGSERSWTPSRRRRSPSTAPHTSSDSG
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggcacgcgggagctgtccaccagcagcacagcaacgacgcggacgctcgt
gacagtcaaaaggaaggatctcatccagtcgccgcgctctttagtctgccgcccccaccg
ccatcgataaaggagcgatccacctcctcacatcacagccaacatgtacagtcctgtccg
gaccgcggcaccaggaacggcgagtgcgtgcctctgaccggccactgcagccttgcgcac
gctgaccgtgcgccttacgacaaccagccgcatccgtttccaggggcctcatctggctat
cagtgtcattctgaggggctctcgcagagcagccattctcctcagcacagatcttcagtt
tccccgcagccctccccatctgatctgctgccgtcgcctctgccttcgcacatttctaat
acacgggatactcgccaaaagagtgctaattacaaacaagacatcttacagcgtcgcacc
gaggagggggggcgtcgagaccaaaaccagttgctgcggcaaccttattataatcaacaa
aaggacccctcctttgagttactcttgccaaactcttgtcaaggacagataaatgcacgc
gaggaagcagaaaaggagaggcaagtaattgagcctcaggctcagttactgttgggcagc
agcttgcccgtcacctactgcatcagcggatcggggcaagtgttccgaaacaagcaggcg
ccgctgttgcagcatcagcatcagcatcagcatcagcagggtcgcgcgcaggagcacagc
ctccagcggcagcagagtgaccgagacagcagcgggtaccaggagggggaaatcgtactc
tgtcagccgtatcaatgcgagcgcgcgctagagagaaactcgtcggtgtctagtagtgac
aacagcagccccccgtacggctctagcagtcaactgtggccagagccccacgacgagcag
gacaggagaaatcgcgcaagcaaacacaaggcacatgctgagcgaacaaagctgagccat
gctggatccaagccctccctctctgagagcagtcactcactccctcagatagccatgaac
agctgcaagtacaatggaggagtggtaaggccactgggaagcctggcagcatcaagacgc
aacctagcagagcatgactctgagacccagccgctccagactcttcacagctccggcctg
gaagtggttgtctccaagggcagtggcgaggaccccagcaaggcgtccaatgagagcctg
gtccgagagagtggcaacgcaccacagaaaaaaaataaagatattggctacaagttgggc
cacaggagggcactttttgagaagcgcaagcggcttagtgactatgccctgatattcggt
atgtttgggatcgttgtcatggtaacagagactgaactgtcttggggggtttacactaag
gaatcttcatattcatttgcactgaaatgccttatcagcctttccactgttattttgctt
ggtcttataataatgtaccacgctcgggaaatacagctgttcatggtcgacaatggggcg
gatgactggaggatagccatgacatatgagcgcatcttcttcattgtcctggagctgctg
gtgtgtgctattcacccaatcccgggccagtatgtgttcacatggacggcccggctggct
ttcacctacgtgccctccgtggcagacgccgacgtagacatcatcctttccatccccatg
ttcctccgcctctacctgattggccgggtcatgctccttcacagcaaactcttcacagac
gcatcctcacgcagcataggtgccctcaacaagatcaactttaacactcgattcgtcatg
aagacccttatgaccatctgcccgggcaccgttctgctggtcttcagcatctcctcctgg
atcatcgcggcctggaccgttcgggtctgtgaaaggtatcatgacaaacaggaagtcact
agtaactttcttggagctatgtggctaatttccataactttcctatcaattggctatgga
gatatggttcctcatacctactgtgggaaaggggtctgtctgctcacaggaatcatggga
gctggttgcactgcacttgtagtcgcagtggtagccagaaagttagaactgacaaaagct
gagaaacacgtccacaatttcatgatggacacccaactttgtaaacgagtaaagaacaca
gctgccaatgtactcagggaaacatggctcatctacaaacacaccaagttagtaaagaag
atagatcatgccaaagtgcgcaaacatcagcgcaagttcttgcaggccattcaccatgca
gtgcaatggctcacatgttgtgtatatgttgtggtttctaaacttgaactgtgttttgtc
ttcattctgctctatcactgcagagctcagaagctccgcagtgtgaaaatggagcagagg
aaactcaatgaccaggccaacactctggtggacctggcgaagactcagaatgtgatgtac
gacctggtgtcagagctgcaggaacgcagtgaggagctggacaagcgtattggcacgttg
gaggacaagctggacgcagtcaccggcagcctgcaggctctgccctgtctgatctcccaa
gccataactcagcagcagcaggacctcctggatggcttcgtgcaccgcttctgccctgct
tcgctgggctcggaacgctcttggaccccttccagacggcggcgctcgccctccactgcc
ccgcacacttcctccgacagcggctaa
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