Carassius gibelio (silver crucian carp): 128028698
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Entry
128028698 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169-like
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128028698
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128028698
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
128028698
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
128028698
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
128028698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
Prok-RING_4
zf-C3HC4
zf-RING_UBOX
zf-RING_10
zf-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
128028698
NCBI-ProteinID:
XP_052471952
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All DBs
Position
A15:20427794..20440285
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AA seq
618 aa
AA seq
DB search
MKMAAVGSAKSAGLGQRGKSRPGTLAAPLSLEESRCPVCSEILLEPVTMPCGHSVCLHCF
QRTVKLISLCCPLCRLRVSSWARKQSREKSLINTELWELVRLSHPERCRRRLEQRDRETA
DGEIFRAPVPIHKSGEMRQEYEKQKMKGGGSEETEERKKKIHRKEDCGMLKHCQYPFCGV
SDSENEEPVGKRTRHVSAFVRKTAFNRSCLNSSAVQRSRSCTDSEDGRGKNRVHAHHAGP
DKASIAHSYNAGILLSSENSRSFSAPVLTLDKRHHWRGIHTSSASLTLHTKPERSISPES
NDSISEELNHFKPIVCSPCTPPKRMPDGRLLEPTIVKSTPRNLTRTLQKSTSYEASPTIL
QKWKQIEVDRQFIKVNSKGTVTSPIAEDLSLKLSPVEEWDSQLCSCDVAKDSLQDHQCIS
VSSAKDRKDKPIVCNKRRLVFDQVNKEEGTQPASAPIRSITQSVADTSSAKGRSKCEALC
KPTEICEPLLDKHIGHCNQGTVDPENFINEPTTRSCVNRPTSRRSKKRSHKTKHLEETLQ
TKISRTDVCDRFDDLIVQQINQEKEDRELALKLQRKFDREFKKVDRHKTSRNNYELRSWA
TKDGMVGHSTRRSGRISK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcggcggtggggtccgccaaatccgctggactggggcaaagaggtaaaagc
aggcctggcactctcgctgctccactgagtttggaggagtcccggtgtccggtgtgctcc
gagattctcctggagccggtaacgatgccatgcggacactcggtgtgcctgcattgcttc
cagcggacggtgaagttaatcagtctgtgctgtcctctgtgccggctgcgagtgtccagc
tgggcccgtaaacagtcccgggagaagagcctgatcaacaccgagctctgggagctggtc
cggctcagtcacccggagagatgcaggcgcaggctggagcagagagaccgagagaccgcg
gacggagaaattttccgtgcacctgtaccaattcataagtctggagaaatgcgtcaagag
tacgagaaacaaaagatgaagggtggaggcagtgaagaaactgaagagcgaaagaaaaaa
atccacagaaaagaagactgtgggatgctaaaacactgtcaatatcctttctgtggagtg
tcagactctgagaatgaagagccggtgggaaagaggacccgacatgtttcagcatttgtg
cgaaaaactgctttcaatagaagttgtcttaatagcagtgctgtccagaggagcaggagc
tgtacagattctgaggatggaagaggaaaaaatagagttcacgcacatcatgccggtcct
gacaaggctagcatcgcacatagttacaacgctggaatccttctgtcctcggagaacagt
cgctctttctcagcaccagtactgaccttagataagagacaccactggcggggcatccac
acctcatccgcttccctcacgcttcataccaaaccagagaggtctattagccccgagagc
aatgacagcatatcggaagaactcaaccatttcaagcctattgtctgctcaccgtgcact
ccacccaaaaggatgcccgatgggcgacttttggaaccaacgattgtgaagtcaacccct
aggaacttgacacgcactctgcagaagtccacaagctacgaggccagcccaaccatcttg
cagaagtggaagcagattgaagttgatcgtcagttcatcaaggtgaactcaaaaggtaca
gtcacaagtccgatcgcagaggatcttagccttaaactgagtccggttgaagaatgggac
agccaactctgcagctgtgatgtagccaaggacagcttgcaagatcatcagtgcatttct
gtatcaagtgctaaggatcggaaggataaacctatagtctgtaataaacgacggcttgta
tttgatcaggttaacaaagaggaaggtacacagccagctagcgctcccatcaggtcgata
actcaatccgttgcagatacttcatccgcaaaagggcgaagcaaatgtgaagcactctgt
aaacccacagaaatttgtgaaccgttgcttgataaacacattggacactgtaatcagggt
actgtagacccagagaacttcataaatgagcctaccacaaggagctgtgttaacagacct
acctcaagaaggagcaaaaagagaagccacaaaaccaaacatttggaagagaccctacag
acaaaaatatcccggacagatgtctgtgacaggtttgatgatctgattgtccagcaaata
aatcaggaaaaggaggacagagaactggcactaaagctacaaagaaagtttgacagagaa
ttcaaaaaagtagacaggcacaaaacaagtcgtaacaattacgaactccggtcctgggct
acaaaagatgggatggtaggacacagtacacgcagatcaggaagaatctccaaataa
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