Carassius gibelio (silver crucian carp): 128028758
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Entry
128028758 CDS
T08819
Name
(RefSeq) neuronal PAS domain-containing protein 1-like isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128028758
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128028758
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
128028758
NCBI-ProteinID:
XP_052472037
LinkDB
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Position
A15:24126545..24173586
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AA seq
769 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNMRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLLEGENNCNKMRRTSHSLV
NDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCQTSHESVSSSASTSSLAGTPEPALSSPRSSVSEFSERGFF
IRMKSTLTKRGLHIKSSGYKVIHVTGRIRCRPALVPGSSRGLHRPMGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISEYMDLSPAEVVGRTCYHFIHAEDLDTIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNIIWVNYVLSRPELADMPL
DLLQLPESLRAERLQTSSSPHKTSPKAQGSTGTQPLKGRTETDLKGKETFSHTAASQSEN
TRKRSHQSDAESGPPEARRQMEVFRQREESPCTSSDQASDSDVEEDDERENEWNHNHTSK
QVKREERPLKQDNGANGASKIHNGRAVIQHLKSVVTGSGSNIKTEQEVMGTSVGPGSGRH
WSQAQPSSGRTNGSSPPSHPQNSTPTEASSKGLFNPPSPTLSPTIPASSLPRDDRSIHGG
RAPDFELLQRLTASGTAGHVLFHPLAIGPQGPQSLYAPSTIRYAPPEMPTAHAEGHRSDH
VAKTAFFPHLQRIASLPSFNGFSPAEPIFPPPLPFCMNGLRGATGTDED
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagcgagggaaagtgtgtgagcgtggagtgggacttccta
caggggctcctcgccaaaccacccactttaccctgcttgcagaacatgaggaaggagaag
tcgcgcaatgcagctcgttctcggcggggtaaggagaactttgagttctttgagctggcc
aagatgcttccgctccccggggcaattaccagccagctggacaaggcctccatcatccgc
ctcaccatcagttacctgcacatgagacactttgccagccagggagacccaccctggagc
cctctactggagggggagaacaactgcaacaagatgcgaagaacaagtcattcgctggtt
aatgacatatttgaacagcacctgggagctcatctactacagtctctggatggatttgtg
tttgtggtcagtcaggaaggccgatttctgtatatctcagagactgtgtccatctacctt
ggcctttcacaggttgagttgactggcagtagcgtgttcgattacatccaccctgcggat
catgttgagatggcggagcgtcttggcattaggccacacctccgggcagaggcaggatgt
caaacgtcccacgagagcgtttcaagctccgcctccacatcctcactggccggcactcca
gaaccagcactatctagtccccgttcttcagtcagtgagttttcagaacgtggtttcttt
atcaggatgaaatccacccttaccaagcgtggcctccacattaaatcctcgggctataaa
gtaattcatgtgacaggtcggattcggtgtcggccagctctggtgccaggttcctctcgc
ggcttgcatcgaccaatgggattggtcgctctggctcacacacttccaccttccacactc
aatgaggtgcgcatggaaagtcaaatgtttgtcttcagagtcaacatggacctgcaggtc
acctactgtgagaacaggatttcagagtatatggaccttagcccagctgaggtggttgga
cgtacctgctaccacttcatccacgcagaagacttggacaccatcaggcagagccatgaa
gacttgctgcggaaagggcaggttgtgaccgggtactatcgatggctgcagaggagagga
ggctatctgtggattcagtcctgtgccactgtgtccattaaccacaaagcgccccatgag
cgtaacatcatctgggtcaactatgtgctcagtcgcccagagctggcagacatgcctctg
gacttattacaactcccagagagcctaagggcagagcggcttcaaacaagctcctcccca
cacaagacctctccaaaggcacaaggctcaacaggaacacagccattgaaaggcaggacc
gagacagacctcaaggggaaggaaaccttctcacacactgctgccagccaatcagagaac
accaggaagagatcacaccagtctgatgctgaaagcggtcctcctgaggcgaggaggcag
atggaggtattccggcagagagaggaaagcccatgtacctcctcagaccaagccagtgac
agcgatgtggaagaggatgatgagagggaaaacgagtggaaccacaaccacactagcaaa
caggtgaagagagaagagaggccattgaaacaagacaatggggccaatggagcaagtaaa
atccacaatggccgcgcagtgatccagcatcttaaaagtgtggtgaccggttcagggtcg
aatattaagactgaacaagaagtgatgggaacaagtgtaggcccgggttctgggaggcac
tggagccaagctcagcccagcagtggaagaaccaatggcagcagtccaccttcccatcct
caaaattccaccccgacagaagcttcatccaagggtctgttcaaccccccctccccgacc
ctgtcgccaaccatccctgcctcatccctgcccagagatgatcggtctatccatggaggg
cgcgctccggactttgaactactgcagagactgactgcaagtgggactgcaggacatgtt
ctatttcatcccctggctattggcccacaggggccccagagtctctatgctcccagcact
atacgctatgccccacctgaaatgccaacagctcatgctgaaggacaccgctcagaccat
gtggccaaaactgctttctttccccacttgcaaaggattgcatctctgccttcctttaat
ggtttttctccagctgaacccatttttcctccacctctgcccttttgtatgaacggactg
aggggggcaacgggtacagatgaggattga
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