Carassius gibelio (silver crucian carp): 128028822
Help
Entry
128028822 CDS
T08819
Name
(RefSeq) protocadherin Fat 4
KO
K16669
protocadherin Fat 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128028822
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Cadherin related
128028822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
EGF
Cadherin_pro
EGF_TEN
hEGF
EGF_2
EGF_CA
Ig_Shg
DUF3377
GBD_Hemicentin
Motif
Other DBs
NCBI-GeneID:
128028822
NCBI-ProteinID:
XP_052472114
LinkDB
All DBs
Position
A15:complement(2182169..2194873)
Genome browser
AA seq
2650 aa
AA seq
DB search
MERYYILTAAAQQGERELTGVRVYFSVIDVNDNPPVFSQNDFSASIPEDSPVGMCFLNLN
VTDRDEGIFGEVDLMVTSGNLENKFSINQHQTLCIRGKLDRETNAMYSLIVQANDRALPT
EARLTTSVHVTVYLLDVNDNSPLITTPSTVRFPENAPLHSVVTVIQATDADAGSNGEVVF
SFESAEEEPFSINSSTGVVYLRKQLDRESEDVVTVTLNVKDKGVPSLFSSMYLTVLIEDV
NDHNPEFTQSSYSLSVYETVPRGTSLLRVNASDQDIGSNGQVRFSVSESEFMVDSVLGVV
SVKDKMDREKKPFYIFFVIAEDQGDIQRSTTATINIAVLDVNDCVPLLSPESLTLHVFEN
GEDSTQHSHQIHASDEDSYEVNGQMTYSIESGNDESLFSLHPNGTFQILEDLDRELKSQY
MLKVNAADSGFPSLTGTGTLVIVVDDVNDNIPIFDREWFSTHILEDSPVGTVFLRVAASD
LDDVQVYKDVLSEDSPKETLVAIVTAESQRNTPMSFYLASGNFGEVFELHHSTGVLTVKD
PLDFESNMHFHLIVEARDSGIPPFSSYAELNLNISDVNDNPPVFSQNIYRCEVYENLASG
RVCNVLATDADSGVFAEVEYFILAGNIEGAFKIDKIHGILSTTKRLDREKIPYYNLTLKA
IDKENNSLSAIATVIIIVLDTNDHAPRFSQIFITEVPEDAPLGFPVIQIAATDEDVGLNA
VIEYTIIGQNSEFPFSIDKTTGILLVLHPLDREDQNHYIVKVNANDSAWSISTDVTIDIT
DVNDNTPIFYQPRYTLTVPEMKMHEVFLLQISATDRDLGENAQILYFIDPPNELFLVNAS
TGKISTKQPIVLHESESVNLTFTVVASDCGSVPLNSSSIVSVTLVRHNQFPPSFIPFRPL
VPVPLTLDVGTEVIQISAIDQDSLVRNNSVEYFNSGGNGSLYFEVEHNSGRVLVNKTLAN
SLGTILTLQITAKDKGLPPFFAQTEISFEVTHENLFAPHFLNRKVEFFVPEDLPIGSVIG
KIQGKDKDAGINGVISYSFDGGNENGLFSIGQSSGLIMLVKALDFEEFETHHLNVIAEDG
GWRPKMERINITVYVTDLNDNPPLFTSTNYIATVSENALIGTSVLQVWAKDADTGIHSQI
TYTLIAGDILLFYLDTKNGTITTLDIFDYEQKQHYELTVKATNIGFPYLFDIARIHIQIA
GLNEFIPAFQRHIYNFTVSEALPPQTEIGRVVAIDYDQGPDGEVFYVPAGQSKKANFVVD
EHTGIIYVSKDLKNRLQNNEILRVLAKNRGAITGFNVDETLIHLDILDENDPPNFDSMLY
TATVSEDISIGTSVTKVKAVDQDVILEWSRFSYSIEHGNINSSFIIDPVSGVISINSHLD
REMWAFYNLTVIAVDEGSPAVTGSTKVAIVVSDVNDNPPKLLTTEGFIRENQPAGTLVST
LAATDDDLPPNQGPFTYWMMRPAEGFSLSSDGVLVTSRPFDRERNPLFHIHIVVQDAGKP
PMSSTTMLHVKVLDENDNAPLQRNINILVKYYGSSFPGGLIGNVRPSDQDELDVFNCTIK
NGPLRMFSFPFGMCNLWSSPYQGEATYNISVEGSDQLHPSVNNSIYVNYKGFTNVSLDNC
VLFYISISTLEEFLSLKYLKFVKALDSLFNLQASKTHVFGMKLQGDKMLLLAAVKSYNGQ
YLTGEVASGISNMHKKLLEAQSNVTIFQITSDPCMLRPCHNGATCNRNIHISQEVAVLES
SSLIFVSPYFVEIFNCSCRAGFTGDACELDFDECTKEPCKNGGSCYNNPGTYFCQCKDGF
SGSHCTIVDNECQSVNCLNGGTCWNRQGGFICDCSPGYEGTFCDHIVDHCGSSPCVYGTC
SSFLTGYSCQCPFGVSGVDCEKHSYGFQELSYIEYPPLDPQYNFIYLEFATVQQNALLVY
NHGDPSTSDFLALEIVSGRLCLSYDLGSGVIRLETGKIVVDGSFHNITVRRTGNIASLEI
DNCSVHDPQGFCLSQNGATGTQRTLEVSSNNMTFGGVKSIDVILQRQIRTHNFVGCMSNM
QVNNFSPDSLKSLASQNVLNRCPQRDIPPCETAVCLNEGVCQDRWSHHRCQCRDQFTGPN
CAMNLAEQNVLFLNGEAYIEFAVKETYRRNQLLQAILDGEEGDSQGFDSVEIKMRTVRTN
GVLVMCWCQTAHLKLKISDGKPLYVFTNVTSGQRLELSMEGNVSDGQWHVIQLRRRGSYI
SLFLDERPVVNTTNGTITHSAFLVETIFLGSAPLRESKDVPGMIQNLGFRGCVEYIKFNG
RLLSFNGYNEIVDASSSPPVFQTFCVSPNHCVLTPCLKDSCLSEPCWNDSDCGSSSKDDY
WCICLHNVSSCGPCLSDKVHSEACSQTQKSAPLWIVAVIIPIVLILLILVLCIVLRRQGK
TCQGEKRRQIYLMPPSKQHGTDNLAFSLGPADESSRNVSNEACKQPDLIRPRDPVQGVES
CYESGPCCHVSGFGGSELEYYEIDSTYSDVNTLQLKKEDERGDQVNGNPKVSQSIMQPQT
NHNPSPTLHQRTSGGDFHQWQRQSQLFFKRKLDPDLTGPPQHLSADEVEKLNNPRDHKGY
PHQNFRECPIKPCRDGPVETSSESESHCSFTGSEFDCERELSLISSHDKDEHPPEGKDTC
GFSDLKLNMV
NT seq
7953 nt
NT seq
+upstream
nt +downstream
nt
atggagcgctactacatcctgactgcagcagctcagcagggggagcgtgaactcaccggg
gtcagagtgtacttcagtgtgatcgatgtcaatgacaacccaccagtgttcagccagaat
gacttttcggcatccataccagaagactcacctgttggaatgtgctttctaaatctcaat
gttacagatcgagatgagggtatatttggagaagtggatttgatggtgacatctggaaac
cttgagaacaagttctctataaaccagcatcaaactctatgtataagagggaagttagac
agagaaacaaacgctatgtatagtctcattgtccaggccaatgatcgtgctctacctaca
gaggcccgacttacaacctcagtgcatgtcactgtctatcttctggatgtcaatgataac
tcccctctcatcacaaccccaagtactgttcgttttccagagaacgcacctcttcattct
gttgttacggttatacaggccacagatgctgatgctggatccaatggtgaagttgttttc
agctttgagagtgcagaagaagaaccgtttagtataaatagttcaactggggttgtgtac
ctgcggaagcaattggacagagaaagtgaggatgttgtcacagtcacactgaacgtcaaa
gataaaggtgttccttcattgttcagctcaatgtacctcacagtgcttattgaggatgta
aacgatcacaatccagagttcactcaaagctcctacagtctttcagtttatgagactgta
cctcgtggaacaagcctgctcagagttaacgcgagtgatcaagatattgggtcaaatggg
caggtgcgcttctctgtctcagagagtgagttcatggtagactctgttctaggtgtggtc
tcggtgaaagacaagatggaccgtgagaagaagcctttctacatcttttttgtcatagca
gaagaccagggagatattcaaaggtccaccacagcaaccattaacatcgcagtcctggat
gttaatgactgtgttcctcttttatcacctgaatcactgacattgcatgtctttgaaaat
ggggaagactctactcagcactctcatcagatacatgcctctgatgaagactcttatgaa
gttaacggtcagatgacatattctatagaatcaggaaatgatgaaagtctcttctcactt
catcccaatggaacattccaaatcttagaagatcttgatagggaactgaaaagccaatac
atgttaaaagttaatgctgctgattcaggatttccatcactgactggcacaggcaccttg
gttattgttgttgatgatgtcaatgacaacattccaatatttgacagggagtggttcagt
actcacatattggaggattctccggttgggactgtttttctgagagttgcagcatcagac
ttagatgatgtccaagtttataaggatgtcctctctgaggattcacccaaagaaaccctg
gtggcaattgtcactgcagaatcacaaagaaacacaccgatgtctttctatctggcttct
ggaaactttggggaggtttttgagcttcaccacagcactggtgtgctgactgtcaaggat
cccttagattttgaaagcaacatgcattttcatctaatagttgaagccagagactcaggg
ataccgcctttttcatcatatgctgaacttaatttgaatatcagtgatgtaaatgataac
ccaccagtgttctcgcaaaacatctacagatgtgaagtgtatgagaacttggcttcagga
agggtgtgtaatgtgttagcaactgatgcagactctggagtgtttgcagaggtggagtat
tttattttggctggtaacattgagggtgcatttaaaatagacaaaattcatggcattctt
tccacaacaaaacgtttggatcgagaaaaaataccgtattataatcttaccctgaaggcc
attgataaagaaaacaacagtctttcagccatcgcaacagttatcattatagttcttgat
acaaatgatcatgcacctcgtttctcacagattttcatcacagaggttcctgaggatgct
cctcttggctttccagtcattcagatagctgctacagatgaagatgttggtctaaatgct
gtaattgaatatacaatcattggccaaaatagtgaattcccgtttagtattgataaaacc
acgggcattttactagtacttcatcctttggacagagaagatcaaaatcactatatagta
aaggttaacgcaaatgattctgcttggagcatcagcacagacgtcaccatagacattaca
gatgtcaatgacaacacgccgatcttctatcaaccacgttacactctcactgttcctgag
atgaagatgcatgaagttttccttctccaaattagcgctactgaccgggatcttggtgag
aatgcccaaatcctttacttcattgacccaccaaatgaactttttttggttaatgcatca
actgggaaaatttcaaccaaacagcccattgttctccatgaatctgaatctgtaaatttg
actttcactgttgtggcgtctgattgcggcagtgttcctttgaacagctctagcattgtt
tcagtgacattagtacggcataatcaattcccaccctcgtttatacccttcaggccttta
gtaccagttcctttaaccctggatgttggaacagaagtgatccaaatatctgctatagat
caagattctcttgtaaggaacaacagtgttgagtacttcaatagtggtggcaatggatct
ctttactttgaggtagaacataacagcggaagagtgctggtaaataaaactttagcgaat
agccttggcaccatcctaacacttcaaatcactgccaaagataaaggccttcctcctttt
tttgcacagactgaaatcagttttgaagttacacatgagaacctttttgcaccacatttt
cttaacagaaaagtcgagttttttgttccggaagatttgcccattggttcagttattgga
aaaatccagggcaaagataaagatgctggcatcaatggtgttatttcctattcttttgat
ggtgggaatgaaaatggattgttttccataggacaatcttcaggattgataatgcttgtt
aaagcacttgactttgaggaatttgaaactcatcatctaaacgtcattgctgaggatgga
ggctggcgtcccaagatggagagaattaatatcacagtatatgtaacagatttaaacgat
aaccctcctttatttacatccacaaattacattgccacagtttcagaaaatgctttaatt
ggtacctcagttttgcaggtttgggcgaaggatgctgacacaggaattcactcccaaatc
acatatacgcttattgccggagacatccttctcttctatttggacaccaaaaatggcaca
atcaccactttagatatatttgattatgagcaaaaacagcattatgaacttacagtcaaa
gccaccaacatcgggtttccatatttgtttgatattgcccgtatacacatccagattgct
ggcctcaatgaattcatccctgcttttcaaagacatatatataacttcacagtgtcagag
gctttgccaccacaaactgaaataggaagggttgttgccattgactatgaccaagggcct
gatggagaagtgttttatgtgcctgctggacaaagtaaaaaagctaattttgtggtggat
gagcatacaggaataatatatgtctcgaaagatttgaaaaatcgcctccaaaataatgaa
attctacgggtgctggcaaaaaacagaggggctattacaggatttaatgttgatgagaca
ttgatacatctagacatactagatgaaaacgatccccctaattttgattcaatgctttac
actgcaacagtgtcagaggacatctcgattgggacatctgtaactaaagtcaaagcggtg
gaccaggatgtgatcctagaatggagcaggttttcttatagcattgaacatggaaatatc
aatagttccttcattatagatcccgtcagtggggtaatttccattaacagtcacctggat
agagaaatgtgggccttctataacctgactgtcattgctgttgacgagggctctcctgct
gtaaccggaagcactaaggtagctatcgtcgtttctgatgtcaatgacaatcctcccaaa
ctgctgaccacagaagggtttattcgagaaaaccaacctgctggcactctggtctccacc
ttagcagccacagatgatgatcttcctccaaatcaaggtcctttcacgtactggatgatg
agacctgctgagggtttttcactctcatctgatggcgttcttgttacctcaagacccttt
gatcgggagcgcaaccctctttttcatatacatattgtggttcaagatgctggtaagcca
ccaatgtcctccaccactatgttacatgttaaagttcttgatgaaaatgacaatgcaccg
ctccagagaaacattaatatattggtgaaatattatggaagttccttcccaggaggacta
atcggaaatgtaagaccgtccgatcaggacgaactggatgtcttcaattgtacaatcaaa
aatgggccacttaggatgtttagtttcccatttgggatgtgtaatttgtggtcgtcccct
taccaaggagaggcaacatataatatttcagttgaagggagtgaccagctccacccttcg
gtcaacaacagcatctacgtcaattacaaaggttttaccaatgtctctctggacaattgc
gtgttgttctacatctctatatcaactcttgaggaatttctgtctttgaagtatttaaaa
ttcgtcaaagctttggatagcctctttaacctacaagcttccaaaacacatgtgtttgga
atgaagttgcaaggagataaaatgctgcttcttgctgcagtgaaaagctacaatggtcag
tatctaactggagaggtggcaagcggaatatcaaacatgcataaaaagttactggaagca
caaagcaatgtgactatattccaaataaccagtgacccatgtatgctccgtccttgccat
aatggtgccacctgcaacagaaacattcacatcagtcaggaagttgctgtgttggaaagc
tccagtcttatatttgtttctccatattttgtggagatctttaactgctcttgtcgagca
ggctttacaggtgatgcatgtgagctagactttgatgaatgtaccaaggagccttgtaaa
aatgggggaagctgctataacaatccaggaacttatttttgtcaatgcaaagatggattc
tcaggatcacactgtactatagttgataatgaatgtcaatcagtaaattgtttaaatgga
ggaacgtgttggaacagacagggagggttcatctgtgattgcagcccaggctatgaagga
acattttgtgatcatattgttgaccactgtggttcctccccttgtgtatatggaacctgc
tccagttttctaacaggttactcttgccaatgtccatttggtgtgagtggagttgattgt
gaaaagcacagttatggctttcaggaactttcttatatagaatatcctccattggatcca
caatataacttcatctatttggaatttgcgactgttcaacaaaacgccttgcttgtgtac
aaccatggtgacccatcaacttcagacttcctggcccttgaaatagtgagtggaagactg
tgcctgtcttatgatcttggatctggagtcatacgattggaaacaggcaagatagtggtt
gatggaagttttcacaacatcaccgtaagaagaactggaaatatagcctctcttgaaata
gacaactgctctgtccatgatccgcaaggattttgcttgtcgcaaaatggtgccactgga
acccaaaggactctggaagtgagctcaaataacatgacgtttggtggcgtaaagtccatt
gatgtcattttacaaaggcaaatcaggactcataactttgttggctgtatgagtaacatg
caagtgaacaacttcagtccagattccttaaaatctttggcgtcccagaatgttcttaat
cgatgtccacaaagagatattcctccatgtgaaaccgcagtgtgtttgaacgaaggagtt
tgtcaagaccgatggtcgcaccatcgctgccagtgtagagaccaattcacaggacccaac
tgtgccatgaatttggctgagcagaatgtattgtttctaaacggcgaggcctacattgag
tttgccgtcaaggaaacctacagaagaaaccagcttctccaagccatcctggatggggag
gaaggagactctcagggatttgacagtgttgagatcaagatgaggactgtcagaacaaat
ggcgttttggttatgtgctggtgtcaaactgctcatctgaaacttaagatatcagatgga
aaacctctgtatgtgttcaccaatgtcacatccgggcagcggctagagctctcaatggag
ggaaatgtatccgatggacagtggcatgtgattcagctgcgcagaagaggctcatacatc
tctctgtttctggatgaacggcctgtagtgaataccaccaatggcaccataactcactcc
gcattcttagtggagaccatttttctgggctctgctccactgagagaatccaaagatgtc
ccagggatgattcaaaatttaggtttcagaggctgtgtggaatacatcaaattcaatggt
cgcctcctgtccttcaatggctacaatgagatagttgatgccagctccagcccacctgtc
ttccaaaccttctgcgtatctccaaaccactgcgttctgactccatgtctgaaggattcc
tgtctatctgagccctgctggaatgatagtgactgtgggtcttcttccaaagacgactac
tggtgcatctgtctgcacaatgtgtcctcgtgtggaccttgcttatctgacaaagtccac
agcgaggcctgttctcaaacccaaaagagcgcccccttatggattgtagcagttattatt
cccattgtccttattcttctgatcctagttctctgtattgtccttagaagacaaggcaaa
acctgtcagggtgaaaagaggcgtcaaatctacctcatgccaccaagcaaacagcatggc
acggataacctggcatttagtttaggccctgctgatgagtcttctcggaatgtctcaaat
gaagcctgcaagcaacctgatctaataagaccaagggatcctgtgcaaggagttgaaagc
tgttatgaaagtggaccttgttgtcatgtctcaggttttggagggagtgaactggagtac
tatgagattgacagcacatactcggatgtgaacaccctacagctgaagaaggaggatgaa
cgtggagatcaggtgaatggcaatccaaaggtttctcaatccatcatgcaacctcaaacg
aatcataatccatctcctacacttcatcagagaacatccggaggtgattttcaccagtgg
caacgtcaatcccaattgttcttcaagagaaaactggatcctgatctgacaggccctcca
caacatctctcggcagatgaagttgagaaactgaacaacccacgggaccacaagggatac
ccccatcagaatttcagagagtgtcccataaagccatgcagagatgggccagtagagaca
tcatcagagagtgaaagccactgctccttcaccggctcagagtttgactgtgagagagaa
ctgtcactcatcagctcacacgacaaagatgaacatccacctgaaggcaaggacacatgc
ggtttcagtgatctaaaattaaacatggtttaa
DBGET
integrated database retrieval system